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Matrix 652 of Study 1046

About Citation title: "Paraphyly in tribe Onagreae: Insights into phylogenetic relationships of Onagraceae based on nuclear and chloroplast sequence data.".
About This study was previously identified under the legacy study ID S941 (Status: Published).

Matrices

Title: trnL-trnF + ITS + rps16 + Indels

Description: Legacy TreeBASE Matrix ID = M1559

Rows

Taxon Label Row Segments Characters 1?–30
Oenothera linifolia  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Camissonia californica  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Gaura villosa  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Gaura drummondii  (none) TGGAAACCTACGAAGTGGCAACTTTCAAAT
Gaura hexandra ssp. hexandra  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Gaura demareei  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Gaura hexandra ssp. gracilis  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Gaura boquillensis  (none) -GGAAACCTACGAAGTGACAACTTTCAAAT
Gaura macrocarpa  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Gaura parviflora  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Gaura mutabilis  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Stenosiphon linifolius  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Calylophus berlandieri  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Calylophus hartwegii  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera deltoides  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera pallida  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera neomexicana  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera fruticosa  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Oenothera multicaulis  (none) TGGAAACCTACGAAGTG-CAACTTTCAAAT
Oenothera tetraptera  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Oenothera rosea  (none) TGGAAACCTACGAAGTGACCACTTTCAAAT
Oenothera speciosa  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Oenothera canescens  (none) TGGAAACCTACGAAGTGAGAACTTTCAAAT
Oenothera flava  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera havardii  (none) TGGAAACCTACGAAGTGACAACTTTCAAAT
Oenothera brachycarpa  (none) TGGAAACCTACGAAGTGAAAACTTTCAAAT
Oenothera psammophila  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera caespitosa  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera xylocarpa  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera primiveris  (none) -GGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera tubifera  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera albicaulis  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera biennis  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera elata  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera affinis  (none) TGGAAACCTGCTAAGTGACAACTTTCAAAT
Oenothera pubescens  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera laciniata  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera heterophylla  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera stubbei  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera macrosceles  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera maysillesii  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Oenothera organensis  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia andina  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia pterosperma  (none) ???????CTACTAAGTGACAACTTTCAAAT
Camissonia minor  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia nevadensis  (none) -GGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia refracta  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia campestris  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia kernensis  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia cheiranthifolia  (none) TGGAAACCTACTAAGTGGCAACTTTCAAAT
Camissonia graciliflora  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia tanacetifolia  (none) ?GGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia subacaulis  (none) GAGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia ovata  (none) -GGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia arenaria  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia boothii  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia claviformis  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Camissonia crassifolia  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Gayophytum heterozygum  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia heterandra  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia delicata  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia affinis  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia rostrata  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia xantiana  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia imbricata  (none) -GGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia pulchella  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia franciscana  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Clarkia mildrediae  (none) -GGACACCTACTAAGTGACAACTTTCAAAT
Xylonagra arborea  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Epilobium canum  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Epilobium rigidum  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Chamerion angustifolium  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Gongylocarpus fruticulosus  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Megacorax gracielanus  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT
Ludwigia peploides  (none) TGGAAACCTACTAAGTGACAACTTTCAAAT

Columns

Column Character Description
1174 end TrnL
1175 start ITS
1837 end ITS
1838 start rps16
2846 end rps16
2847 Indels 95-98
2848 115-119
2849 306/324
2850 334/350
2851 359-60
2852 413-17
2853 465-9
2854 498-501
2855 874-7
2856 950-4
2857 1017-20
2858 1132-41
2859 1163-71
2860 1913-17
2861 2027-30
2862 2089-92
2863 2235-45
2864 2243-5
2865 2488-91
2866 2488-90
2867 2707-10
2868 2717-37
2869 2788-9
2870 2796-9