@ARTICLE{TreeBASE2Ref22014,
author = {Mohammad Ziaur Rahman and Mukobata Hiroyuki and Haruhisa Suga and Koji Kageyama},
title = {Phytophthora asiatica sp. nov., a new species causing leaf and stem blight of kudzu in Japan},
year = {2013},
keywords = {Amphigynous?Kudzu?Leaf blight?Phylogenetic?Phytophthora?Slow growing.},
doi = {10.1007/s11557-014-0959-1},
url = {http://},
pmid = {},
journal = {Mycological Progress},
volume = {},
number = {},
pages = {},
abstract = {A new slow growing, nonpapillate, homothallic Phytophthora species with quite large oogonia isolated from leaf blight of kudzu (Pueraria lobata) in Toyama and Ishikawa district of Japan in 2005 which could not be assigned to existing taxa. The isolates were re-examined in the light of morphological study and multi-locus phylogenetic analysis including six nuclear regions ie. rDNA internal transcribed spacer (ITS), rDNA large sub-unit (LSU), translation elongation factor 1-alpha (EF1-alpha), heat shock protein 90, 60 S ribosomal protein L10 and beta-tubulin and one mitochondrial gene, cytochrome c oxidase (cox)I. The species differs morphologically from its closely related Phytophthora species by its characteristic obturbinate and distorted sporangium with external proliferation, aplerotic oospore, predominantly amphigynous and intercalary antheridia, presence of catenulate hyphal swellings, higher optimum growth temperature and relatively slower growth rates. The unique characteristic is the germination of zoospore inside the sporangia. In the multi-locus phylogenetic analysis based on seven loci, they form a distinct monophyletic group within clade 7 with strong bootstrap support. The result of morphological and phylogenetic analysis support that the isolates represent a new species Phytophthora puerariae sp. nov.}
}
Matrix 5808 of Study 14256

Citation title:
"Phytophthora asiatica sp. nov., a new species causing leaf and stem blight of kudzu in Japan".

Study name:
"Phytophthora asiatica sp. nov., a new species causing leaf and stem blight of kudzu in Japan".

This study is part of submission 14256
(Status: Published).
Matrices
Title: Fig. 2 Indels
Rows
Taxon Label |
Row Segments |
Characters 1?–30 |
Leptochloa dubia |
(none)
|
00000000000000000 |
Fingerhuthia sesleriiformis |
(none)
|
00001000010000000 |
Tetrachne dregei |
(none)
|
00000000010000000 |
Enneapogon scoparius |
(none)
|
00001000100000000 |
Schmidtia pappophoroides |
(none)
|
00001000100000000 |
Uniola paniculata |
(none)
|
00001000010000000 |
Uniola pittieri |
(none)
|
00001000010000000 |
Eragrostis barrelieri |
(none)
|
00010000000001??? |
Eragrostis secundiflora |
(none)
|
1000101??00010001 |
Eragrostis truncata |
(none)
|
00000000001100000 |
Eragrostis aspera |
(none)
|
00010000000001??? |
Eragrostis patenti-pilosa |
(none)
|
10001001100010001 |
Eragrostis ciliaris |
(none)
|
00001100000010011 |
Eragrostis echinochloidea |
(none)
|
00000000001100000 |
Eragrostis nutans |
(none)
|
10001001100010001 |
Eragrostis polytricha |
(none)
|
00000000000000000 |
Eragrostis cilianensis |
(none)
|
00000000001000000 |
Eragrostis bahiensis |
(none)
|
1000001??00010001 |
Eragrostis minor |
(none)
|
00000000000000000 |
Eragrostis mexicana |
(none)
|
00000000000000000 |
Eragrostis trichophora |
(none)
|
00000000000000000 |
Eragrostis lugens |
(none)
|
00000000000000000 |
Eragrostis tremula |
(none)
|
1000101??00010001 |
Eragrostis macilenta |
(none)
|
00000000000000000 |
Eragrostis tenella |
(none)
|
00001100000010011 |
Eragrostis dielsii |
(none)
|
00000000000000000 |
Eragrostis intermedia |
(none)
|
00000000000000000 |
Eragrostis heteromera |
(none)
|
00000000000000000 |
Eragrostis japonica |
(none)
|
00000000000000000 |
Eragrostis neesii |
(none)
|
00000000000000000 |
Eragrostis tef |
(none)
|
00000000000000000 |
Eragrostis pilosa |
(none)
|
00000000000000000 |
Eragrostis lehmanniana |
(none)
|
00000000000000000 |
Eragrostis bicolor |
(none)
|
00000000000000000 |
Eragrostis papposa |
(none)
|
00000000000000000 |
Eragrostis paniciformis |
(none)
|
10101001100010101 |
Eragrostis botryodes |
(none)
|
10101001100010101 |
Eragrostis unioloides |
(none)
|
00001000000000000 |
Eragrostis sessilispica |
(none)
|
00001001100010001 |
Eragrostis airoides |
(none)
|
00001000000000000 |
Eragrostis reptans |
(none)
|
01000001100010001 |
Columns
Column |
Character Description |
1
|
gap 119
|
2
|
gap 372 376
|
3
|
gap 789 794
|
4
|
gap 825 834
|
5
|
gap 468 484
|
6
|
gap 1408 1429
|
7
|
gap 1427 1448
|
8
|
gap 1430 1435
|
9
|
gap 1436 1441
|
10
|
gap 1476 1477
|
11
|
gap 1561 1565
|
12
|
gap 1603 1607
|
13
|
gap 1793 1797
|
14
|
gap 1837 2124
|
15
|
gap 1874 1878
|
16
|
gap 1919 1936
|
17
|
gap 1959 1970
|