TreeBASE Search-Matrix 1770 of study 10924

@ARTICLE{TreeBASE2Ref19247, author = {Young-Joon Choi and Hyeon-Dong Shin and Sebastian Ploch and Marco Thines}, title = {Three new cryptic species are the closest relatives of the widespread species Albugo candida}, year = {2010}, keywords = {Albuginales, broad species concept, host specificity, Hyaloperonospora, morphology, species key, obligate biotroph, white blister rust}, doi = {}, url = {http://}, pmid = {}, journal = {Fungal Diversity}, volume = {}, number = {}, pages = {}, abstract = {White blister rust caused by the obligate biotroph Albugo candida (Albuginaceae; Oomycota) is one of the most notorious and common diseases of Brassicaceae. During the past five years, A. candida specimens collected from about 30 host genera were phylogenetically and morphologically investigated in several studies. These not only revealed that A. candida s.str. has a broad host range, encompassing a large number of host plants belonging to Brassicales, but also the presence of previously overlooked species of Albugo with hosts in this order. In this study, we examined specimens from Alyssum, Barbarea, and Rorippa, of which many species were commonly recorded as host plants of A. candida but could not be included in previous works due to the paucity of specimens available. It was revealed that Albugo specimens from Alyssum montanum, Barbarea vulgaris, and various Rorippa species, were placed in three phylogenetically distinct clades, but closer to A. candida s.str. than any previously reported species. Oospores were observed from Albugo specimens parasitic to Rorippa and could be distinguished morphologically from A. candida. Therefore, Albugo rorippae sp. nov. is described and illustrated here. The present study reveals that a large number of Albugo species remain still undiscovered, and that species close to A. candida exist, which could help elucidating the basis of the broad host range of A. candida as opposed to the narrow specialisation that is seemingly present in other species of Albugo on the Brassicaceae.} }

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Matrix 1770 of Study 10924

Citation title: "Three new cryptic species are the closest relatives of the widespread species Albugo candida".

Study name: "Three new cryptic species are the closest relatives of the widespread species Albugo candida".

This study is part of submission 10914 (Status: Published).

Matrices

Title: 18S rRNA

Description: Legacy TreeBASE Matrix ID = M3114

Rows

Taxon Label	Row Segments	Characters 1?–30
Tubulicrinis gracillimus	(none)	??????AGTCATATGCTTGTCTCAAAGATT
Trichaptum abietinum	(none)	???CGTAGTCATATGC?TGTCTCAAAGA-T
Skvortzovia furfurella	(none)	?????????CATATGCTTGTCTCAAAGATT
Sistotrema raduloides	(none)	ATTCGTAGTCATATGCTTGTCTCAAAGATT
Rickenella fibula	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Resinicium saccharicola	(none)	?????????CATATGCTTGTCTCAAAGATT
Resinicium mutabile	(none)	????????TCATATGCTTGTCTCAAAGATT
Resinicium meridionale DQ974210	(none)	????????CCATATGCTTGTCTCAAAGATT
Resinicium meridionale DQ834910	(none)	????????CCATATGCTTGTCTCAAAGATT
Resinicium meridionale AY293142	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Resinicium furfuraceum	(none)	???TGTATCCATATGCTTGTCTCAAAGATT
Resinicium friabile	(none)	????????CCATATGCTTGTCTCAAAGATT
Resinicium chiricahuaese	(none)	??????????????????????????????
Resinicium bicolor DQ834914	(none)	??????????????????????????????
Resinicium bicolor AF518588	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Resinicium bicolor AF026615	(none)	?????TAGTCATATGCTTGTCTCAAAGATT
Phellinus igniarius	(none)	??????????????????GTCTCAAAGATT
Oxyporus latemarginatus	(none)	????GTAGTCATATGCTTGTCTCAAAGATT
Kavinia himantia	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Inonotus hispidus	(none)	???CGTAGTCATATGCTTGTCTCA?AGATT
Inonotus baumii	(none)	????GTAGTCATATGCTTGTCTCAAAGATT
Hyphoderma praetermissum	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Hydnochaete olivacea	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Hydnochaete duportii	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Fibricium rude	(none)	???CGTAGTCATATGCTTGTCTCAAAGATT
Cyphellostereum laeve	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT
Basidioradulum radula	(none)	??TCGTAGTCATATGCTTGTCTCAAAGATT

Columns

None of the columns has a description.