@ARTICLE{TreeBASE2Ref19474,
author = {Barbara E Goodson and Sumaiyah K Rehman and Robert K Jansen},
title = {Molecular systematics and biogeography of Descurainia (Brassicaceae) based on nuclear ITS and non-coding chloroplast DNA},
year = {2011},
keywords = {Brassicaceae, hybridization, incongruence, long-distance dispersal, molecular dating, phylogeny},
doi = {},
url = {http://},
pmid = {},
journal = {Systematic Botany},
volume = {},
number = {},
pages = {},
abstract = {Descurainia is a genus in the Brassicaceae distributed throughout portions of the temperate Old and New World. The genus is most diverse in western North America and western South America, with a smaller center of distribution in the Canary Islands and three additional Old World species. Descurainia is well-known for its taxonomic complexity, especially within New World species, on account of its numerous intergrading forms coupled with circumscriptions dependent upon inconsistent and overlapping characters. A molecular-based analysis of Descurainia was conducted using DNA sequences from nuclear ribosomal internal transcribed spacer (ITS) and non-coding chloroplast regions. Descurainia and related genera form the monophyletic tribe Descurainieae, which is divided into two lineages: 1) Hornungia and Tropidocarpum and 2) Descurainia, Ianhedgea, and Robeschia. The genus is strongly supported as monophyletic, and appears to be of Old World origin with recent diversification within the Canary Islands and the New World. Within the New World, three major well-supported lineages can be identified, with South American taxa distributed into four clades that correlate well with fruit dehiscence and orientation. A phylogeny recovered from combined ITS and chloroplast data is not well-resolved with respect to relationships between some major New World lineages, but suggests that multiple independent dispersals of Descurainia have taken place between North and South America. Substantial incongruence between ITS and chloroplast phylogenies, as well as the presence of mixed ITS sequences, point to a complex evolutionary history involving extensive gene flow and hybridization for North American Descurainia.}
}
Matrix 7828 of Study 11210

Citation title:
"Molecular systematics and biogeography of Descurainia (Brassicaceae) based on nuclear ITS and non-coding chloroplast DNA".

Study name:
"Molecular systematics and biogeography of Descurainia (Brassicaceae) based on nuclear ITS and non-coding chloroplast DNA".

This study is part of submission 11200
(Status: Published).
Matrices
Title: Descurainia ITS Alignment for Divergence Time Estimates
Rows
Taxon Label |
Row Segments |
Characters 1?–30 |
Descurainia paradisa C7 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia pinnata C3 type 2 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia artemisioides B36 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia millefolia B24 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia tanacetifolia C6 |
(none)
|
TACCTGTCCAAAACAGAACGACCCGATGAA |
Descurainia appendiculata B126 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia cumingiana tenuissima D43 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia pinnata D10 |
(none)
|
TACCTGTTCAAAACAGAACGACCCG-TGAA |
Descurainia pinnata C14 type 1 |
(none)
|
TACCTGTTCAAAACAGAACGACCCG-TGAA |
Descurainia virletii C39 |
(none)
|
TACCTGTTCAAAACAGAACGACCCG-TGAA |
Descurainia incisa D6 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia incisa D57 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia incisa paysonii D73 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Descurainia kochii D2 |
(none)
|
TACCTGTCCAAAACAGCACGACCCG-CGAA |
Descurainia sophia MB3 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-CGAA |
Hornungia alpina |
(none)
|
ATCCTGTTTAAAACAGAATGACCCG-TGAA |
Hornungia petraea |
(none)
|
ATCCTGTTCTAAACAGAACGACCCG-TGAA |
Hornungia procumbens |
(none)
|
TACCTGTCCAAAACAGAACGACCTG-TGAA |
Ianhedgea minutiflora MB2 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-CGAA |
Robeschia schimperi MB1 |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Tropidocarpum gracile |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-TGAA |
Arabidopsis thaliana |
(none)
|
TACCTGTCCAAAACAGAACGACCCG-CGAA |
Cardamine amara |
(none)
|
ATCCTGTCCAAAACAGAACGACCCG-CGAA |
Rorippa indica |
(none)
|
ATCCTGTCCAAAACAGAACGACCCG-CGAA |
Brassica rapa |
(none)
|
?????????????????????????????? |
Arabis alpina |
(none)
|
TACCTGTCCAAAACAGAACAACCCG-CGAA |
Aethionema grandiflorum |
(none)
|
?????????????????????????????? |
Columns
None of the columns has a description.