@ARTICLE{TreeBASE2Ref19750,
author = {Hanna Weiss-Schneeweiss and Cordula Bl?ch and Barbara Turner and Jose L Villasenor and Tod F. Stuessy and Gerald M. Schneeweiss},
title = {The promiscuous and the chaste: frequent allopolyploid speciation and its genomic consequences in American daisies (Melampodium sect. Melampodium; Asteraceae)},
year = {2011},
keywords = {allopolyploidy, chromosome evolution, fluorescence in situ hybridisation, genome size, phylogeny, rDNA},
doi = {10.1111/j.1558-5646.2011.01424.x},
url = {http://},
pmid = {},
journal = {Evolution},
volume = {},
number = {},
pages = {},
abstract = {Polyploidy, an important factor in eukaryotic evolution, is especially abundant in angiosperms, where it often acts in concert with hybridization to produce allopolyploids. The application of molecular phylogenetic techniques has identified the origins of numerous allopolyploids, but little is known on genomic and chromosomal consequences of allopolyploidization, despite their important role in conferring divergence of allopolyploids from their parental species. Here, using several plastid and nuclear sequence markers, we clarify the origin of tetra- and hexaploids in a group of American daisies, allowing characterization of genome dynamics in polyploids compared to their diploid ancestors. All polyploid species are allopolyploids. Among the four diploid gene pools, the propensity for allopolyploidization is unevenly distributed phylogenetically with a few species apparently more prone to participate, but the underlying causes remain unclear. Polyploid genomes are characterized by differential loss of ribosomal DNA loci (5S and 35S rDNA), known hotspots of chromosomal evolution, but show genome size additivity, suggesting the presence of processes counterbalancing genome reduction. Patterns of ribosomal DNA sequence conversion and provenance of the lost loci are highly idiosyncratic and differ even between allopolyploids of identical parentage, indicating that allopolyploids deriving from the same lower-ploid parental species can follow different evolutionary trajectories.}
}
Matrix 8987 of Study 11476

Citation title:
"The promiscuous and the chaste: frequent allopolyploid speciation and its genomic consequences in American daisies (Melampodium sect. Melampodium; Asteraceae)".

Study name:
"The promiscuous and the chaste: frequent allopolyploid speciation and its genomic consequences in American daisies (Melampodium sect. Melampodium; Asteraceae)".

This study is part of submission 11466
(Status: Published).
Matrices
Title: cpDNA sequences
Description: aligned cpDNA sequences (trnK-matK, psbA)
Download all Row Segment Metadata
Rows
|
Taxon Label |
Row Segments |
Characters 1?–30 |
| Melampodium americanum acc. 1 |
View
|
AAAACGACCATAAATACTTCAATTTAAATG |
| Melampodium americanum acc. 2 |
View
|
AAAACGGCCATAAATACTTCAATTTAAATG |
| Melampodium diffusum acc. 1 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium diffusum acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium pilosum acc. 1 |
View
|
AAAACGACCTTAAATACTTCAATTTAAATG |
| Melampodium pilosum acc. 2 |
View
|
AAAACGACCATAAATACTTCAATTTAAATG |
| Melampodium longipes acc. 2 |
View
|
AAAACGGCCATAAATACTTCAATTTAAATG |
| Melampodium linearilobum acc. 1 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium linearilobum acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium nayaritense acc. 3 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium nayaritense acc. 2 |
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|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium nayaritense acc. 4 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium sericeum |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium strigosum acc. 1 |
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|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium strigosum acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium pringlei acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium longicorne acc. 1 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium longicorne acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium glabribracteatum |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium mayfieldii acc. 1 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium mayfieldii acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium cupulatum acc. 1 |
View
|
AAAACGAACATAAATACTTT----TAAATG |
| Melampodium cupulatum acc. 2 |
View
|
AAAACGAACATAAATACTTT----TAAATG |
| Melampodium appendiculatum |
View
|
AAAACGAACATAAATACTTT----TAAATG |
| Melampodium tenellum acc. 1 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium tenellum acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium rosei acc. 2 |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
| Melampodium rosei acc. 3 |
View
|
AAAACGAACATAAATACTTT----TAAATG |
| Melampodium sinuatum |
View
|
AAAACGAACATAAATACTTCAATTTAAATG |
Columns
None of the columns has a description.