@ARTICLE{TreeBASE2Ref20092,
author = {Myron Shekelle and Rudolf Meier and Ian Wahyu and Ir Wirdateti and Nelson Ting},
title = {Molecular Phylogenetics and Chronometrics of Tarsiidae Based on 12S mtDNA Haplotypes: Evidence for Miocene Origins of Crown Tarsiers and Numerous Species within the Sulawesian Clade},
year = {2010},
keywords = {Biodiversity; Biogeography; Conservation; Crypticspecies; Dispersal; Endemism; Phylogeography; Sulawesi; Tarsius; Vicariance},
doi = {10.1007/s10764-010-9457-8},
url = {http://},
pmid = {},
journal = {International Journal of Primatology},
volume = {31},
number = {},
pages = {1083--1106},
abstract = {We report new mitochondrial DNA sequence data from tarsiers sampled from several populations, including the extreme northeast and southwest of the range of the Tarsius tarsier species complex, the most extensive sampling ever reported for this taxon. Our results provide the opportunity to produce the first ever molecular chronometric analysis of Tarsiidae. These results date the age of crown tarsiers, minimally, to the middle Miocene, and each of the 3 tarsier species groups, Tarsius bancanus, T. syrichta, and the T. tarsier complex, to the early or middle Miocene. Thus, each of these 3 species has evolved in isolation for a period of time that is consistent with that which would be expected for multiple speciation events. Our analysis of the Tarsius tarsier complex reveals 5 subclades, each of which is interpreted to represent a haplogroup at, or above, the species level, a result that is consistent with current hypotheses about numerous cryptic species within this species complex. The implications for conservation within the Sulawesi biogeo- graphic region are that Sulawesi is subdivided into numerous subregions of endemism and that, by extrapolating the example of cryptic tarsier species to other taxa, biodiversity may be underestimated by an order of magnitude. The practical realties of conservation in Sulawesi are such that it is most reasonable to assume that anthropogenic extinctions are occurring, and that some species will go extinct before they have even been identified.}
}
Matrix 10443 of Study 11977

Citation title:
"Molecular Phylogenetics and Chronometrics of Tarsiidae Based on 12S mtDNA Haplotypes: Evidence for Miocene Origins of Crown Tarsiers and Numerous Species within the Sulawesian Clade".

Study name:
"Molecular Phylogenetics and Chronometrics of Tarsiidae Based on 12S mtDNA Haplotypes: Evidence for Miocene Origins of Crown Tarsiers and Numerous Species within the Sulawesian Clade".

This study is part of submission 11977
(Status: Published).
Matrices
Title: Tarsiidae Based on 12S mtDNA Alignment 1
Download all Row Segment Metadata
Rows
Taxon Label |
Row Segments |
Characters 1?–30 |
Cebus albifrons NC 002763 |
(none)
|
GCATCTACTATCCTGTGAGAATGCCCTCTA |
Cynocephalus variegatus AF460846 |
View
|
GCATCCGCGCCCCCGTGAAAACGCCCTTCA |
Homo sapiens NC 001807 |
(none)
|
GCATCCCCGTTCCAGTGAGTTCACCCTCTA |
Lemur catta NC 004025 |
(none)
|
GTAACCGCATCCCAGTGAGAATGCCCTCCA |
Nycticebus coucang NC 002765 |
(none)
|
GTCACCGCGTCCCCGTGAAAATGCCCTCTA |
Otolemur crassicaudatus AF179289 |
View
|
GTTGCCGCACTCCAGTGAGAATGCCCTCTA |
Pan troglodytes NC 001643 |
(none)
|
GCATCCCCGCCCC-GTGAGT-CACCCTCTA |
Papio hamadryas NC 001992 |
(none)
|
GCATCCCCATTCCGGTGAAGACGCCCTTCC |
Pongo pygmaeus NC 001646 |
(none)
|
GCATCCCCGCCCCAGTGAGT-CGCCCTCCA |
Presbytis melalophos DQ355299 |
View
|
GCATCCCCGCCCCAGTGAAGACACCCTGCA |
Saimiri sciureus FJ785425 |
View
|
GCATCCGCAGCCCTGTGAAAATGCCCTCTA |
Tarsius tarsier 104 HM470225 |
View
|
GTATCCACTCCCCAGTGAGAATGCCCTCTG |
Tarsius bancanus 001 AF348159 |
View
|
GTATCCGCCCCCCAGTGAGAATGCCCTCTA |
Tarsius dentatus 062 HM470229 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius sangirensis 049 HM470205 |
View
|
GTATCCACACCCCAGTGAGGATGCCCTCTA |
Tarsius sangirensis 050 HM470206 |
View
|
GTATCCACACCCCAGTGAGGATGCCCTCTA |
Tarsius syrichta 001 AF069976 |
View
|
GTATCCGCCTCCCAGTGAGAATGCCCTCCA |
Tarsius tarsier 018 HM470211 |
View
|
GTATCCACCC{CT}CCAGTGAGAATGCCCT |
Tarsius tarsier 019 HM470212 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 052 HM470219 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 057 HM470220 |
View
|
GTATCCACCC{CT}CCAGTGAGAATGCCCT |
Tarsius tarsier 058 HM470221 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 082 HM470207 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 084 HM470209 |
View
|
GTATACACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 085 HM470210 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 090 HM470213 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 096 HM470217 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 100 HM470218 |
View
|
GTATCCACCCCCCAGTGAGAATGCCCTCTA |
Tarsius tarsier 074 HM470215 |
View
|
GTATCCACCTTCCAGTGAGAATGCCCTCTA |
Theropithecus gelada EU580083 |
View
|
GTATCCTCGCTCCGGTGAAGACGCCCCCCC |
Columns
None of the columns has a description.