@ARTICLE{TreeBASE2Ref20310,
author = {Junko Kusumi and Hiroshi Azuma and Hsy-Yu Tzeng and Lien-Siang Chou and Yan-Qiong Peng and Keiko Nakamura and Zhi-Hui Su },
title = {Phylogenetic analyses suggest a hybrid origin of the figs (Moraceae: Ficus) that are endemic to the Ogasawara (Bonin) Islands, Japan},
year = {2012},
keywords = {Figs; Fig wasps; Co-speciation; Oceanic islands; Molecular phylogeny; Hybrids},
doi = {},
url = {http://},
pmid = {},
journal = {Molecular Phylogenetics and Evolution},
volume = {},
number = {},
pages = {},
abstract = {The Ogasawara Islands are oceanic islands and harbor a unique endemic flora. There are three fig species (Ficus boninsimae, F. nishimurae and F. iidaiana) endemic to the Ogasawara Islands, and these species have been considered to be closely related to Ficus erecta, and to have diverged within the islands. However, this hypothesis remains uncertain. To investigate this issue, we assessed the phylogenetic relationships of the Ogasawara figs and their close relatives occurring in Japan, Taiwan and South China based on six plastid genome regions, nuclear ITS region and two nuclear genes. The plastid genome-based tree indicated a close relationship between the Ogasawara figs and F. erecta, whereas some of the nuclear gene-based trees suggested this relationship was not so close. In addition, the phylogenetic analyses of the pollinating wasps associated with these fig species based on the nuclear 28S rRNA and mitochondrial cytB genes suggested that the fig-pollinating wasps of F. erecta are not sister to those of the Ogasawara figs. These results suggest the occurrence of an early hybridization event(s) in the lineage leading to the Ogasawara figs.
}
}
Matrix 11134 of Study 12233

Citation title:
"Phylogenetic analyses suggest a hybrid origin of the figs (Moraceae: Ficus) that are endemic to the Ogasawara (Bonin) Islands, Japan".

Study name:
"Phylogenetic analyses suggest a hybrid origin of the figs (Moraceae: Ficus) that are endemic to the Ogasawara (Bonin) Islands, Japan".

This study is part of submission 12233
(Status: Published).
Matrices
Title: 6 non-coding regions of the pt genome
Rows
Taxon Label |
Row Segments |
Characters 1?–30 |
Ficus tannoensis |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus formosana Hap2 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus formosana Hap1 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap3 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap6 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap2 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap8 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap4 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap1 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap7 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap5 F. boninsimae F. nishimurae F. iidaiana |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus erecta Hap9 |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus vaccinioides |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus nipponica |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus pumila |
(none)
|
AAGAAAATTCAAATTATGTTTATATACAAA |
Ficus stenophylla F. ischnopoda |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus virgata |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus ampelas |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus pedunculosa |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus superba |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus microcarpa |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus septica |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus benguetensis |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus variegata |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus yoponensis |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Ficus insipida |
(none)
|
AAGAAAATTCAAGTTATGTTTATATACAAA |
Columns
None of the columns has a description.