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Matrix 11729 of Study 12411

About Citation title: "Perforin evolved from a gene duplication of MPEG1, followed by a complex pattern of gene gain and loss within Euteleostomi".
About Study name: "Perforin evolved from a gene duplication of MPEG1, followed by a complex pattern of gene gain and loss within Euteleostomi".
About This study is part of submission 12411 (Status: Published).

Matrices

Title: Fish perforin

Description: Fish perforin alignment

Rows

Taxon Label Row Segments Characters 1?–30
Homo sapiens PRF1  (none) PCHTAARSECKRSHKFVPGAWLAGEGVDVT
Oncorhynchus mykiss PRF1  (none) SCTIGSANECKEAE-FAPGTNLAGEGFDIT
Salmo salar PRF1.1  (none) SCIIGSANECKEAE-FAPGTNLAGEGFDIT
Salmo salar PRF1.2  (none) SCTTGRPAECKAAL-SAPGTNLAGEGFDVV
Paralichthys olivaceus PRF1  (none) SCTDGKPMQCQNAE-YAPGANLAGEGFDIT
Takifugu rubripes PRF1.5  (none) TCWTASVPECEKAP-FVPGHNLAGKGFDVV
Takifugu rubripes PRF1.1  (none) SCTQGTPKECLDAE-FAPGSNLAGEGFDIT
Takifugu rubripes PRF1.2  (none) ACQTSSFTECQNAP-FVPGHNLVGEGFDVV
Takifugu rubripes PRF1.6  (none) PCRIGNFSQCQSAP-FVPGHNLVGEGFNVV
Takifugu rubripes PRF1.3  (none) VGYIGTPTECAKAH-FVPGYNLGGEGFDVV
Tetraodon nigroviridis PRF1.1  (none) SCSQGKPQECLEAE-FAPGSNLAGEGFDIT
Tetraodon nigroviridis PRF1.3  (none) TCWTASGPECEKAP-FVPGHNLAGEGFDVV
Tetraodon nigroviridis PRF1.2  (none) ACQTSSFTECQQAP-FVPGHSLVGEGFDVV
Oryzias latipes PRF1.1  (none) MCTDGTPKECQEAE-FAPGSNLAGEGFDIT
Oryzias latipes PRF1.3  (none) MCTDGTPQECQQAE-FVPGSNLAGEGFDIT
Oryzias latipes PRF1.4  (none) TCTDGKPKECQEAE-FVPGSNLAGEGFDIT
Oryzias latipes PRF1.6  (none) ACRIGTGPECEKAP-FVPGHNLAGEGFDVV
Oryzias latipes PRF1.5  (none) SCRIGNSSECDSAS-FVPGHNLVGEGFDVV
Oryzias latipes PRF1.2  (none) MCTDGTPKECLEAE-FAPGSNLAGEGFDIT
Oryzias latipes PRF1.8  (none) TCTDGTPQECQDAG-FVPGSNLAGEGFDIT
Gasterosteus aculeatus PRF1.1  (none) SCTDGTPSQCAGAE-LAPGTNMAGEGFDIT
Gasterosteus aculeatus PRF1.2  (none) VPFIGSPQQCEKAR-FVPGYNLGGEGFDIV
Gasterosteus aculeatus PRF1.3  (none) VRFIGSPQQCAKAR-FVPGYNLGGEGFDIV
Gasterosteus aculeatus PRF1.4  (none) VRFIGSPQQCAKAR-FVPGYNLGGEGFDIV
Gasterosteus aculeatus PRF1.5  (none) GCRVGSGAECEKAP-FVPGHNLAGEGFDVV
Gasterosteus aculeatus PRF1.6  (none) VPFLGSPQQCEKAR-FVPGYNLGGEGFDIV
Carassius auratus langsdorfii PRF1.1  (none) SCFLGKEAECQDAD-FVPGSDLAGEGFDIT
Carassius auratus langsdorfii PRF1.2  (none) CCETVPSTECEKPS-FVPGHNLVGEGFDIV
Carassius auratus langsdorfii PRF1.3  (none) EGDIGSSKECKNAP-FVPGHNLAGEGFDIV
Ctenopharyngodon idella PRF1.1  (none) ACFRGKEAECQDAD-FAPGSDLAGEGFDIT
Ctenopharyngodon idella PRF1.2  (none) SCAKGKPNECAEAS-FAPGSNLAGEGYDVT
Danio rerio PRF1.3  (none) GCESVASTECEKLP-FVPGHNLVGEGFNIV
Danio rerio PRF1.1  (none) SCTKGKPKECEEAT-FAPGSNLAGEGYDVI
Danio rerio PRF1.4  (none) ACFLGKQAECQDAS-FVPGSDLAGEGFDIT
Danio rerio PRF1.2  (none) EVEIGTSKECENAH-FVPGYNLAGEGFDVV
Danio rerio PRF1.6  (none) ACHTGSQAECEKAP-FVPGYNLAGEGFDLV
Danio rerio PRF1.5  (none) ACHTGSQTECEKAP-FVPGYNLAGEGFDVV
Danio rerio PRF1.7  (none) EVEIGTLKECENAH-FVPGYNLAGEGFDVV
Danio rerio PRF1.8  (none) EDEIGTSKECEDAP-FVPRYNLAGEGFDVV

Columns

None of the columns has a description.