Go to search
Citation
Taxa
Matrices
Trees
Analyses
Matrix 14212 of Study 12493
Citation title: "When Naked became Armored: An Eight-Gene Phylogeny Reveals Monophyletic Origin of Theca in Dinoflagellates. ".
Study name: "When Naked became Armored: An Eight-Gene Phylogeny Reveals Monophyletic Origin of Theca in Dinoflagellates. ".
This study is part of submission 12493
(Status: Published).
Matrices
Title: S4 18s
Description: S4_18s
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Adenoides eludens | (none) | ---------GATCCTGCCAGTAGTCATA-T |
| Akashiwo sanguinea | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Alexandrium affine | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Alexandrium fundyense | (none) | TACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Alexandrium minutum | (none) | TACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Amoebophrya sp ex Akashiwo sanguineaum | (none) | -ACCTGGTTGATCCTGCCAGTAGCCATA-T |
| Amoebophrya sp ex Gymnodinium instriatum | (none) | AACC{CT}GGT{CT}GATCCTGCCAGTAGT |
| Amphidinium carterae | (none) | TACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Amphidinium massartii | (none) | ---------------------AGTCATA-T |
| Amphidinium mootonorum | (none) | ---------------------AGTTATA-T |
| Amphisolenia bidentata | (none) | ------------------------------ |
| Amylax triacantha | (none) | ------------------------------ |
| Azadinium obesum | (none) | ------------------------------ |
| Azadinium spinosum | (none) | --CCTGGTTGATCCTGCCAGTAGTCATA-T |
| Baldinia anauniensis | (none) | ------------------------------ |
| Brachidinium capitatum | (none) | ------------------------------ |
| Cachonina hallii | (none) | AACCTGGTTGATCCTCCCAGTAGTCATA-T |
| Ceratium furca | (none) | ------------------------------ |
| Ceratium longipes | (none) | ------------------------------ |
| Ceratocorys horrida | (none) | ------------------------------ |
| Coolia canariensis | (none) | ------------------------------ |
| Coolia monotis | (none) | ---------GATCCTGCCAGTAGTCATA-T |
| Crypthecodinium cohnii | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Cryptoperidiniopsis brodyi | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Cryptosporidium parvum | (none) | ---------------------AGTCATA-T |
| Dinophysis acuminata | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Dinophysis caudata | (none) | ------------------------------ |
| Dissodinium pseudolunula | (none) | ------------------------------ |
| Duboscquodinium collinii | (none) | --CCTGGTTGATCCTGCCAGTAGTCATA-T |
| Durinskia baltica | (none) | -ACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Eimeria tenella | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Ensiculifera aff loeblichii | (none) | AACCTGGTTGATCCTGCCAGTAGTCTTA-T |
| Fragilidium subglobosum | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Gambierdiscus australes | (none) | ------------------------------ |
| Gambierdiscus toxicus | (none) | ------------------------------ |
| Gloeodinium montanum | (none) | ------------------------------ |
| Gonyaulax cochlea | (none) | ---------------------AGTCATA-T |
| Gonyaulax spinifera | (none) | -----GGTTGATCCTGCCAGTAGTCATA-T |
| Gymnodinium aureolum | (none) | -----------TCCTGCCAGTAGTCATA-T |
| Gymnodinium beii | (none) | -ACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Gymnodinium catenatum | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Gymnodinium dorsalisulcum | (none) | --------------------TAGTCATA-T |
| Gymnodinium fuscum | (none) | CACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Gyrodiniellum shiwhaense | (none) | ------------------------------ |
| Gyrodinium dominans | (none) | ATTCTGGTTGATCCTGCCAGTAGTCATA-T |
| Gyrodinium rubrum | (none) | ------------------------------ |
| Gyrodinium spirale | (none) | ------------------------------ |
| Hematodinium sp | (none) | ------------------------------ |
| Heterocapsa pygmaea | (none) | ------------------------------ |
| Heterocapsa triquetra | (none) | CACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Karenia brevis | (none) | ---CTGGTTGATCCTGCCAGTAGTCATA-T |
| Karenia mikimotoi | (none) | ----GGGTTGATCCTGCCAGTAGTCATA-T |
| Karlodinium veneficum | (none) | -----------TCCTGCCAGTAGTCATA-T |
| Kryptoperidinium foliaceum | (none) | ---CTGGTTGATCCTGCCAGTAGTCATA-T |
| Lepidodinium chlorophorum | (none) | CACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Lepidodinium viride | (none) | -----------TCCTGCCAGTAGTCATA-T |
| Lingulodinium polyedrum | (none) | ---------------------AGTGATA-T |
| Luciella masanensis | (none) | CAACCTGGTGATCCTGCCAGTAGTCATA-T |
| Nematodinium sp BSL2009a | (none) | ---------------------AGTCATA-T |
| Noctiluca scintillans | (none) | CACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Ornithocercus magnificus | (none) | ------------------------------ |
| Ornithocercus quadratus | (none) | ------------------------------ |
| Oxyrrhis marina | (none) | ------------------------------ |
| Pentapharsodinium dalei | (none) | ------------------------------ |
| Pentapharsodinium tyrrhenicum | (none) | CACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Peridiniopsis niei | (none) | ------------------------------ |
| Peridiniopsis penardii | (none) | ---------------------------A-T |
| Peridinium cinctum | (none) | ------------------------------ |
| Peridinium willei | (none) | ---------------------AGTCATA-T |
| Perkinsus marinus | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Pfiesteria piscicida | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Phalacroma cf rotundatum | (none) | ------------------------------ |
| Phalacroma rapa | (none) | ------------------------------ |
| Pheopolykrikos hartmannii | (none) | ---------GATCCTGCCAGTAGTCATA-T |
| Polarella glacialis | (none) | ------------------------------ |
| Polykrikos kofoidii | (none) | ---------------------AGTCATA-T |
| Prorocentrum concavum | (none) | -----------TCCTGCCAGTAGTCATA-T |
| Prorocentrum consutum | (none) | ------------------------------ |
| Prorocentrum donghaiense | (none) | -ACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Prorocentrum lima | (none) | ------------------------------ |
| Prorocentrum micans | (none) | --CCTGGTTGATCCTGCCAGTAGTCATA-T |
| Prorocentrum minimum | (none) | -ACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Protoceratium reticulatum | (none) | ---------GATCCTGCCAGTAGTCATA-T |
| Protodinium simplex | (none) | ------------------------------ |
| Protoperidinium claudicans | (none) | TACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Protoperidinium minutum | (none) | ------------------------------ |
| Pseudopfiesteria shumwayae | (none) | ---CTGGTTGATCCTGCCAGTAGTCATA-T |
| Pyrocystis lunula | (none) | ---------------------AGTCATA-T |
| Pyrocystis noctiluca | (none) | -----GGTTGATCCTGCCAGTAGTCATATT |
| Pyrodinium bahamense | (none) | ------------------------------ |
| Scrippsiella sweeneyae | (none) | ---------------------AGTCATA-T |
| Scrippsiella trochoidea | (none) | ----TGGTTGATCCTGCCAGTAGTCATA-T |
| Spiniferodinium galeiforme | (none) | ---------------------AGTCATA-T |
| Stoeckeria algicida | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Symbiodinium microadriaticum | (none) | -----GGTTGATCCTGCCAGTAGTCATA-T |
| Symbiodinium sp C3 | (none) | ---------------GCCAGTAGTCATA-T |
| Takayama cf pulchellum | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Thecadinium kofoidii | (none) | ---------------------AGTCATA-T |
| Theileria parva | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Thoracosphaera heimii | (none) | ---------------------AGTCATA-T |
| Tintinnophagus acutus | (none) | -ACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Toxoplasma gondii | (none) | AACCTGGTTGATCCTGCCAGTAGTCATA-T |
| Warnowia sp BSL2009a | (none) | ---------------------AGTCATA-T |
| Woloszynskia halophila | (none) | ------------------------------ |
Columns
None of the columns has a description.
