Matrix 13024 of Study 12808
Matrices
Title: 28S nrDNA alignment
Description: LSU only for genera
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Saccharomyces cerevisiae Z73326 | (none) | -TTGA-CCTCAAATCA-GGTAGGAGTACCC |
| Fusicladium amoenum EU035425 | (none) | GTTGG-CCTCGGATCA-GGTGGGGATACCC |
| Fusicladium carpophilum EU035426 | (none) | GTTGG-CCTCGGATCA-GGTGGGGATACCC |
| Fusicladium effusum EU035430 | (none) | ------------------------------ |
| Venturia inaequalis EU035437 | (none) | GTTGG-CCTCGGATCA-GGTGGGGATACCC |
| Fusicladium convolvularum EU035428 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Venturia hanliniana AF050290 | (none) | -TTGG-CCTCGGATCA-GGTGGGGATACCC |
| Cladoriella eucalypti EU040224 | (none) | ------CCTCGGATCA-GGTAGGGATACCC |
| Cladoriella eucalypti DQ195790 | (none) | ------------------------------ |
| Heteroconium eucalypti DQ885893 | (none) | TTTGA-CCTCGGATCA-GGTGGGGATACCC |
| Alysidiella parasitica DQ923525 | (none) | TTTGA-CCTCGGATCA-GGTGGGGATACCC |
| Blastacervulus eucalypti GQ303302 | (none) | ------------------------------ |
| Heteroconium kleinziense EF110616 | (none) | GTTGA-CCTCGGATCA-GGTGGGAATACCC |
| Aulographina eucalypti HM535600 | (none) | ------------------------------ |
| Penidiella strumelloidea EU019277 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Catenulostroma germania EU019253 | (none) | ------------------------------ |
| Devriesia thermodurans CBS 115878 | (none) | ------------------------------ |
| Devriesia shelburniensis CBS 115876 | (none) | ------------------------------ |
| Devriesia staurophora DQ008150 | (none) | ------------------------------ |
| Devriesia staurophora DQ008151 | (none) | ------------------------------ |
| Penidiella aggregata JF499862 | (none) | GTTGA-CCTCGGATCA-GGTAGGGATACCC |
| Catenulostroma chromoblastomycosa EU019251 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Stenella araguata EU019250 | (none) | ------------------------------ |
| Penidiella ellipsoidea JF499863 | (none) | ------------------------------ |
| Penidiella rigidophora EU019276 | (none) | ------------------------------ |
| Ramularia aplospora CBS 545.82 | (none) | ------------------------------ |
| Ramularia endophylla AY490776 | (none) | ------------------------------ |
| Passalora dahliae CBS 113031 | (none) | ------------------------------ |
| Passalora fulva DQ008163 | (none) | ------------------------------ |
| Pseudocercospora vitis GU214483 | (none) | GTTGA-CCTCGGATCA-GGTAGGGATACCC |
| Pseudocercospora paraguayensis AF309574 | (none) | ------------------------------ |
| Periconiella arcuata EU041836 | (none) | ------------------------------ |
| Periconiella velutina EU041840 | (none) | ------------------------------ |
| Zasmidium citri GU214502 | (none) | GTTGA-CCTCGGATCA-GGTAGGGATACCC |
| Zasmidium cellare EU041878 | (none) | ------------------------------ |
| Rachicladosporium cboliae GU214484 | (none) | ------------------------------ |
| Rachicladosporium pini JF951165 | (none) | GTTGA-CCTCGGATCA-GGTAGGGATACCC |
| Rachicladosporium luculiae CPC 11407 | (none) | ---------CGGATCA-GGTAGGGATACCC |
| Graphiopsis chlorocephala EU009457 | (none) | ------------------------------ |
| Graphiopsis chlorocephala EU009458 | (none) | ------------ATCA-GGTAGGGATAACC |
| Verrucocladosporium dirinae CBS 112794 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Toxicladosporium irritans CBS 185.58 | (none) | ------------------GTAGGGATACCC |
| Cladosporium allicinum DQ008149 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Cladosporium cladosporioides DQ008146 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Cladosporium iridis DQ008148 | (none) | ------------------------------ |
| Cladosporium cladosporioides DQ008145 | (none) | -TTGA-CCTCGGATCA-GGTAGGGATACCC |
| Cladosporium uredinicola DQ008147 | (none) | ------------------------------ |
| Toxicocladosporium rubrigenum FJ790305 | (none) | ------------------------------ |
| Sorocybe resinae EU030277 | (none) | ------------------------------ |
| Lasallia pustulata AY300839 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACCC |
| Capronia peltigerae HQ613813 | (none) | ------------------------------ |
| Glyphium elatum AF346420 | (none) | ------------------------------ |
| Metulocladosporiella musae DQ008161 | (none) | ------------------------------ |
| Metulocladosporiella musae DQ008162 | (none) | ------------------------------ |
| Metulocladosporiella musicola DQ008159 | (none) | ------------------------------ |
| Metulocladosporiella musicola DQ008160 | (none) | ------------------------------ |
| Cladophialophora australiensis EU035402 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACGC |
| Cladophialophora chaetospira EU035406 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACGC |
| Chaetomium globosum AF286403 | (none) | ------------------------------ |
| Chaetomium homopilatum AF286404 | (none) | ------------------------------ |
| Retroconis fusiformis CBS 330.81 | (none) | ------------------------------ |
| Aporothielavia leptoderma AF096186 | (none) | ------------------------------ |
| Diaporthe angelicae AY196781 | (none) | ------------------------------ |
| Taeniolella alta DQ377938 | (none) | ------------------------------ |
| Diaporthe phaseolorum AY346279 | (none) | ---------------------------CCC |
| Subramaniomyces fusisaprophyticus EU040241 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACCC |
| Parapleurotheciopsis inaequiseptata EU040235 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACCC |
| Pidoplitchkoviella terricola AF096197 | (none) | ------------------------------ |
| Polyscytalum fecundissimum EU035441 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACCC |
| Phlogicylindrium eucalypti DQ923534 | (none) | GTTGA-CCTCGGATCA-GGTAGGAATACCC |
| Polyscytalum algarvense GQ303318 | (none) | ------------------------------ |
| Myxotrichum deflexum AY541491 | (none) | ------------------------------ |
| Rhizocladosporium argillaceum EU040240 | (none) | -TTGA-CCTCGGATCA-GGTAGGAATACCC |
| Hormoconis resinae EU040231 | (none) | ------------------------------ |
| Hormoconis resinae EU040230 | (none) | ------------------------------ |
| Neofabraea alba AY064705 | (none) | ------------------------------ |
| Hyalodendriella betulae CBS 261.82 | (none) | ------------------------------ |
| Torrendiella eucalypti CPC 11049 | (none) | ------------------------------ |
| Bisporella citrina AY789385 | (none) | ------------------------------ |
| Blumeria graminis f. sp. bromi AB022362 | (none) | -TTGA-CCTCGAATCA-GGTAGGGATACCC |
| Seifertia azaleae EU030276 | (none) | ------------------------------ |
| Beverwykella pulmonaria GU301804 | (none) | ------------------------------ |
| Ascochyta pisi DQ678070 | (none) | ------------------------------ |
| Phoma herbarum DQ678066 | (none) | ------------------------------ |
| Didymella cucurbitacearum AY293792 | (none) | ------------------------------ |
| Didymella bryoniae AB266850 | (none) | --TTGACCTCGGATCA-GGTAGGGATACCC |
| Leptospora rubella DQ195792 | (none) | ------------------------------ |
| Phaeosphaeria avenaria AY544684 | (none) | ------------------------------ |
| Coniothyrium palmarum CBS 758.73 | (none) | ------------------------------ |
| Ochrocladosporium elatum CBS 146.33 | (none) | ----------------------------CC |
| Ochrocladosporium frigidarii CBS 103.81 | (none) | ------------------------------ |
| Haplotrichum conspersum AY586657 | (none) | ------------------------------ |
| Botryobasidium subcoronatum EU118607 | (none) | TCTGA-CCTCAAATCG-GGTAGGACTACCC |
| Botryobasidium subcoronatum EU909344 | (none) | TCTGA-CCTCAAATCG-GGTAGGACTACCC |
| Haplotrichum curtisii EU118629 | (none) | TCTGA-CCTCAAATCG-GGTAGGACTACCC |
| Athelia epiphylla AY586633 | (none) | -TTGA-CCTCAAATCA-GGTAGGACTACCC |
| Athelia neuhoffii GQ162812 | (none) | TTTGAGCCTCAAATCAGGGTAGGACTACCC |
| Athelia decipiens AY586632 | (none) | TTTGA-CCTCAAATCA-GGTAGGACTACCC |
Columns
None of the columns has a description.