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Citation
Taxa
Matrices
Trees
Analyses
Matrix 2659 of Study 1300
Citation title: "A phylogeny of Begonia using nuclear ribosomal sequence data and non-molecular characters".
This study was previously identified under the legacy study ID S1220
(Status: Published).
Matrices
Title: nr ITS, 5.8S and 26S DNA
Description: Legacy TreeBASE Matrix ID = M2112
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Begonia symsanguinea | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Hillebrandia sandwicensis | (none) | GATCATTGTCGATTCCTGC--AAAA---GC |
| Datisca glomerata | (none) | GATCATTGTCGATGCCTT--AAAA------ |
| Datisca cannabina | (none) | GATCATTGTCGATGCCTT---AAA------ |
| Begonia masoniana | (none) | --------------------AGAGA---TC |
| Begonia malabarica | (none) | --ATTGT-CGATTCCTG-C-A{AG}AAT-- |
| Begonia sp. Pritzelia | (none) | -----GT-CGATTCCTG-C-AGAAT---GC |
| Begonia lobata | (none) | -----GT-CGATTCCGG-C-CGAAT---GC |
| Begonia angularis | (none) | TCATTGT-CGATTCCTG-C-AGAAT---GC |
| Begonia violifolia | (none) | --------CTTTCTATG-CGGAGAT---GC |
| Begonia thomeana | (none) | TC-TTGT-CGATTCCTG-{AC}--GAGA-- |
| Begonia sutherlandii | (none) | TCATTGT-CGATTCTTG-C-AAAAT---GC |
| Begonia subscutata | (none) | ------TGTCGATTCCTGC-C{AC}{AT}{ |
| Begonia staudtii | (none) | GATCATTGTCGATTCCT-----------GC |
| Begonia socotrana | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Begonia sericoneura | (none) | ----TGT-CGAT-CCTG-A-GC{AG}{AG} |
| Begonia scutifolia | (none) | ------------------------------ |
| Begonia scapigera | (none) | ------TGTCGATTCCT{AC}--------- |
| Begonia samhaensis | (none) | ---TTGT-CGATTCCTG-{AC}-{AG}{AG |
| Begonia salaziensis | (none) | ----------------------------GC |
| Begonia roxburghii | (none) | --TCATTGTCGAGTCCTGC-A{AG}AAT-- |
| Begonia quadrialata | (none) | ------------------------------ |
| Begonia prismatocarpa | (none) | ---TCTTGTCGATGACTG{ACG}{CG}{AC |
| Begonia potamophila | (none) | --------TCGATGACTGCA--------GC |
| Begonia poculifera | (none) | ---TCTTGTTGATTCCTGC-A{AG}AAA-- |
| Begonia palmata | (none) | -CATTGT-CGATTCCTG-C-AGAAT---GC |
| Begonia olbia | (none) | TCATTGT-CGAC-{CT}CTG-C-AAAAT-- |
| Begonia obliqua | (none) | TCATTGC-CGATTCCTG-C-AAAAT---GC |
| Begonia nossibea | (none) | ------T-CGATTCCTG{AC}C--GAAA-- |
| Begonia molleri | (none) | -----TTGTCGATTCCTGC{AC}--AA--- |
| Begonia meyerijohannis | (none) | --TCATTGTCGATTCCTG{AC}-GAAA--- |
| Begonia mannii | (none) | -----GT-CGATTC{CT}CG-C{AT}AGAA |
| Begonia mananjebensis | (none) | --------CGATTCCTG{AC}C--GAA{AT |
| Begonia madecassa | (none) | TCATTGT-CGATTCCTG-C-AAAAA---GC |
| Begonia luxurians | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Begonia loranthoides | (none) | ------TGTCGATTCCTGC-A{AG}AAA-- |
| Begonia longipetiolata | (none) | ------TGTCGATTCCTGCCGAAA----GC |
| Begonia letouzeyi | (none) | -------GT{AC}GATGCTA---------- |
| Begonia kisuluana | (none) | ----TGT-CGATTCCTG-{AC}-CGAA{AT |
| Begonia johnstonii | (none) | GATCATTTTCG-TTCCAGC-AAAAA---GC |
| Begonia iucunda | (none) | ------TGTCGATTCCTG{AC}C{ACG}AA |
| Begonia integerrima | (none) | ---TTGT-CGATGCCGG-C-AGAAT---GC |
| Begonia incarnata | (none) | --------CGATTCCTG-C-A{AG}AAT-- |
| Begonia horticola | (none) | ---TTGT-CGATTCCTG-C-{AC}GAAA-- |
| Begonia holtonis | (none) | TCATTGC-CGATTCCTG-C-AAAAT---GC |
| Begonia grandis | (none) | --TCATTGTCGATTCCTGC-A{AG}AAT-- |
| Begonia goegoensis | (none) | TCATTGT-CGTTTCCTG-CAAAAAT---GC |
| Begonia geranioides | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Begonia gabonensis | (none) | -----TTGTCGATTCCTGC{AC}{AC}A{A |
| Begonia francoisii | (none) | -----T{CT}-CGATTCCTGAC--GAAA-- |
| Begonia floccifera | (none) | ------------------------------ |
| Begonia engleri | (none) | GATCATTGTCGATTCCTGC-AAATA---GC |
| Begonia edmondoi | (none) | -CATTGT-CGATGCCTG-C-AGAAT---GC |
| Begonia duncanthomasii | (none) | TGCGGAAGGATCATTGTCGATTCCT---AC |
| Begonia dregei partita | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Begonia dregei ssp homonyma | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Begonia dregei | (none) | TCATTGT-CGATTCCTG-C-AAAAT---GC |
| Begonia dipetala | (none) | TCATTGT-CGATTCTTG-C-AAAAT---GC |
| Begonia dewildei | (none) | GATCATTGTCGATTCCTGCGAAAAAAGAGC |
| Begonia crassirostris | (none) | ----------------------------GC |
| Begonia convolvulacea | (none) | ---TTGT-CGATTCCTG-C-{AC}{AG}AA |
| Begonia cinnabarina | (none) | ---TTGT-CGATGCCTG-C-{AC}-A{AG} |
| Begonia capillipes | (none) | --TT-GT-CGATTCCTG-C-{AC}{AC}A{ |
| Begonia bogneri | (none) | TCATTGT-CGATTCCTG-C-AGAAA---GC |
| Begonia balansana | (none) | GATCATTGTCGATTCCTGC-AAAAT---GC |
| Begonia aspleniifolia | (none) | GATCATTGCCGATTCCTGC-AAAAA---GC |
| Begonia annobonensis | (none) | GATCATTGTCGATTCCTGCAAAGA----GC |
| Begonia ankaranensis | (none) | TCATTTT-CGATTCCTG-C-AAAAA---GC |
| Begonia aequata | (none) | TCATTGT-CGATTCCTG-C-A{AG}AAT-- |
Columns
None of the columns has a description.
