Matrix 1389 of Study 1330
Matrices
Title: Appendices I and II
Description: Legacy TreeBASE Matrix ID = M2193
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Macrogalidia musschenbr | (none) | 110011201001000010210111212020 |
| Paradoxurus zeylonensis | (none) | 200011201001010010210111122020 |
| Hemigalus derbyanus | (none) | 100010201001000000310012102020 |
| Cynogale bennettii | (none) | 111011201101010011311012102020 |
| Diplogale hosei | (none) | 110010200001000000310012122020 |
| Chrotogale owstoni | (none) | 000020201001000000310013122020 |
| Hyaena brunnea | (none) | 000010001000000101210001111020 |
| Proteles cristatus | (none) | 000011201101020201211020111120 |
| Herpestes ichneumon | (none) | 100000111000020220310002222020 |
| Nandinia binotata | (none) | 200010001101010010210113122020 |
| Cryptoprocta ferox | (none) | 101010001111220110110102102021 |
| Fossa fossana | (none) | 000010001101100100210013102020 |
| Eupleres goudotii | (none) | 000011201101120010210013011020 |
| Civettictis civetta | (none) | 001010000101000100210011102020 |
| Viverra zibetha | (none) | 001010001101000100210011100020 |
| Viverra civettina | (none) | 101010201101000100210012102020 |
| Viverra tangalunga | (none) | 101011201101000100210010100020 |
| Viverricula indica | (none) | 101100010100020110210012102020 |
| Viverra megaspila | (none) | 001010001101000100210012102020 |
| Genetta johnstoni | (none) | 201110011101000110210012102020 |
| Genetta maculata | (none) | 201110011101000110210012102020 |
| Genetta thierryi | (none) | 201110011101000110210013122020 |
| Genetta tigrina | (none) | 201110011101000110210012102020 |
| Genetta victoriae | (none) | 201110011101000110210011102020 |
| Genetta servalina | (none) | 101110011101000110210012102020 |
| Genetta abyssinica | (none) | 201110011101000110210012122020 |
| Genetta angolensis | (none) | 201110011101000110210012102020 |
| Genetta genetta | (none) | 201110011101000110210012102020 |
| Osbornictis piscivora | (none) | 210110011101000110210012110020 |
| Prionodon linsang | (none) | 200110000101010020210113122020 |
| Prionodon pardicolor | (none) | 200110000101010010210113122020 |
| Poiana richardsoni | (none) | 200110000101000110210012122020 |
| Arctictis binturong | (none) | 100021201011110200110111202120 |
| Arctogalidia trivirgata | (none) | 201011200001000010210111202020 |
| Paguma larvata | (none) | 101011201001000210210111112020 |
| Paradoxurus herma | (none) | 100011201001000010210111102020 |
| Paradoxurus jerdoni | (none) | 100011201001000010210111102020 |
| Mungos mungo | (none) | 100000111000020210210002202020 |
| Galidia elegans | (none) | 200001010110120110210002102021 |
| Felis bengalensis | (none) | 201010011002020120000102102010 |
| Lynx lynx | (none) | 200010010002000120000101112011 |
| Canis aureus | (none) | 000000000000001000000000000000 |
| Bassariscus astutus | (none) | 200010010100211110000000000010 |
| Ursus americanus | (none) | 301001010000211110000001202021 |
Columns
| Column | Character Description |
|---|---|
| 1 | Maxilla, infraorbital foramen (position of the anterior opening of the infraorbi |
| 2 | Maxilla, infraorbital foramen, overall size |
| 3 | Maxilla, infraorbital foramen, shape |
| 4 | Maxilla, infraorbital foramen |
| 5 | Maxilla, infraorbital foramen, ventral border |
| 6 | Maxilla, infraorbital foramen, ventral border, relative position |
| 7 | Maxilla, infraorbital foramen, dorsal border |
| 8 | Maxilla, anterior alveolar foramen - A small foramen that lies within the infrao |
| 9 | Maxilla, antorbital fossa - The antorbital fossa is on the rostrum and directly |
| 10 | Maxilla, nasolabialis fossa - This fossa lies on the ventral root of anterior su |
| 11 | Nasals, proportional dimensions - Length measured at suture; width measured as w |
| 12 | Nasals, posterior extension between frontals |
| 13 | Nasals, width |
| 14 | Nasals and frontals, midline depression |
| 15 | Maxilloturbinals |
| 16 | Frontals, inflation anterior to the postorbital processes |
| 17 | Rostrum, dorsal profile |
| 18 | Rostrum, ?trough? - This is caused by the retraction of the nasals, creating a s |
| 19 | Palate, anterior palatine foramina (= posterior palatine foramina of Crouch, 196 |
| 20 | Palatine-maxilla, anterior palatine foramina |
| 21 | Palate, width, posterior to the canines - Measured as the buccal width at the ca |
| 22 | Palate, tooth rows, lingual edge |
| 23 | Palatal surface |
| 24 | Palatine-maxilla suture |
| 25 | Palatine, mesopterygoid palate - The mesopterygoid palatal region is here unders |
| 26 | Palatine, relative size (excluding mesopterygoid) |
| 27 | Palatine, relative size (including mesopterygoid) |
| 28 | Palatine, mesopterygoid region |
| 29 | Palatine, mesopterygoid region - To understand this feature, the palate must be |
| 30 | Palatine, post palatal notch - This refers to the anterior emargination between |
| 31 | Palatine, extension of palate posterior to the tooth row - This refers to the po |
| 32 | Premaxilla, incisive foramina (= anterior palatine foramina of Crouch, 1969) - S |
| 33 | Premaxilla-maxilla suture (midline) (Qiu, 1987) |
| 34 | Premaxilla, Stenos foramen (posterior edge) - Steno?s foramen appears in some ma |
| 35 | Vomer, attachment to palate |
| 36 | Orbit, anterior margin - Coding based on holding the palate horizontal-level. |
| 37 | Alisphenoid, foramen rotundum - Serves for the passage of the maxillary division |
| 38 | Alisphenoid, foramen rotundum |
| 39 | Alisphenoid, (alar) canal (Flynn et al., 1988) - Work by Novacek (1977, 1986) an |
| 40 | Alisphenoid-frontal muscle ridge |
| 41 | Alisphenoid, optic foramen interorbital connection - In some species, there is a |
| 42 | Frontal, supraorbital process |
| 43 | Frontal-parietal suture (at midline) - Baseline is a vertical line through the g |
| 44 | Frontal, temporal crest - Serves for the attachment of m. temporalis that raises |
| 45 | Frontal, postorbital region (width) |
| 46 | Frontal, interorbital inflation |
| 47 | Frontal, postorbital inflation |
| 48 | Postorbital constriction position - The postorbital constriction would be the po |
| 49 | Jugal |
| 50 | Jugal-maxilla, posterioventral process - Serves for the attachment of the masset |
| 51 | Jugal, dorsal postorbital process |
| 52 | Jugal, exposure on interorbital surface |
| 53 | Lacrimal |
| 54 | Lacrimal, inferior oblique muscle fossa |
| 55 | Inferior oblique muscle fossa |
| 56 | Orbitosphenoid, anterior ?process? |
| 57 | Orbitosphenoid, shape |
| 58 | Orbitosphenoid, sphenorbital fissure size |
| 59 | Maxilla, intraorbital wing |
| 60 | Maxilla, posterior border of zygomatic process |
| 61 | Maxilla, anterior edge of orbit |
| 62 | Maxilla, orbital process - The maxilla expands outward in a horizontal plane in |
| 63 | Palatine, orbital process |
| 64 | Palatine, sphenopalatine foramen - Serves for the passage of the sphenopalatine |
| 65 | Palatine, location of the sphenopalatine foramen (= orbitonasal foramen of Butle |
| 66 | Palatine, sphenopalatine foramen - Serves for the passage of the sphenopalatine |
| 67 | Palatine, orbital wing |
| 68 | Palatine, orbital exposure |
| 69 | Pterygoid, epipterygoid processes - Serves for the attachment of m. pterygoid me |
| 70 | Pterygoid, hamular process |
| 71 | Alisphenoid, foramen ovale (position) - Comparisons made to the posteriormost ed |
| 72 | Alisphenoid canal, anterior opening (foramen rotundum) - Comparisons made while |
| 73 | Basioccipital, hypoglossal foramen (= condyloid foramen of Hunt, 1987; Flynn et |
| 74 | Basioccipital, posterior lacerate foramen (= jugular) - Serves for the passage o |
| 75 | Basioccipital, muscle fossa - Serves for the insertion of m. rectus capitis vent |
| 76 | Basioccipital, m. longus capitis rugosity |
| 77 | Basioccipital, contact with entotympanic bullae |
| 78 | Basioccipital width (between bullae at midpoint) |
| 79 | Basisphenoid, medial lacerate foramen - Serves for the passage of the ascending |
| 80 | Basisphenoid, posterior opening of the vidian canal - In the space between the p |
| 81 | Squamosal, postglenoid foramen (Hough, 1948; Neff, 1983; Flynn et al., 1988) - F |
| 82 | Squamosal, postglenoid process - Reference point is posteriormost surface of gle |
| 83 | Squamosal, infrasquamosal fossa - The infrasquamosal fossa is the portion of the |
| 84 | Squamosal, lateral extension |
| 85 | Ectotympanic-entotympanic division - In the viverrids, the point of contact betw |
| 86 | Ectotympanic, ring, medial expansion (Hunt, 1987; Neff, 1983) |
| 87 | Ectotympanic, ring, lateral expansion (external auditory meatus) (Hunt, 1987; Ne |
| 88 | Ectotympanic, ring, inclination |
| 89 | Ectotympanic, inflation, form |
| 90 | Ectotympanic, direct ventral inflation to meatal tube |
| 91 | Ectotympanic, septum (Hunt, 1987) |
| 92 | Ectotympanic, styliform process - Anteromedial and ventral to the eustachian tub |
| 93 | Ectotympanic, eustachian tube |
| 94 | Ectotympanic, anteromedial process - The anteromedial process is on the anterome |
| 95 | Ectotympanic, external auditory meatus |
| 96 | Entotympanic, relative inflation (Hunt, 1987) |
| 97 | Entotympanic, ventral pseudoseptae |
| 98 | Entotympanic, septum |
| 99 | Entotympanic, septum - Hunt (1987) contrasted Nandinia with no true internal sep |
| 100 | Entotympanic, carotid canal, posterior opening (Flynn et al., 1988) |
| 101 | Entotympanic, course of the internal carotid - Hunt (1987) coded herpestids and |
| 102 | Entotympanic ossification - Flynn et al. (1988) listed ?0? as a synapomorphy for |
| 103 | Entotympanic, rostral (Hunt, 1987) - Hunt (1987) established polarity on this fe |
| 104 | Entotympanic, lateral expansion |
| 105 | Entotympanic, anterior extension |
| 106 | Entotympanic, antero-medial extension |
| 107 | Entotympanic, carotide canal, anterior opening |
| 108 | Petrosal, laterally directed mastoid pocket, middle ear cavity (Hunt, 1987) |
| 109 | Petrosal, ventral promontorial process (Hunt, 1987) |
| 110 | Petrosal, posteromedial extension (Hunt, 1989) |
| 111 | Petrosal, mastoid, petramastoid ridge - Origin of m. digastricus which opens the |
| 112 | Petrosal, inferior petrosal sinus (petrobasilar canal) - Closely related to the |
| 113 | Petrosal, subarcuate (floccular) fossa - The subarcuate (floccular) fossa is a l |
| 114 | Petrosal, fenestra cochleae (round window) |
| 115 | Petrosal, basal whorl of cochlea |
| 116 | Petrosal, mastoid, exposed ventrolateral process |
| 117 | Petrosal, mastoid, occipital exposure |
| 118 | Petrosal, mastoid, mastoid foramen |
| 119 | Dorsal pseudoseptae |
| 120 | Petrosal, fossa muscularis major (tensor tympani fossa) - Origin of m. tensor ty |
| 121 | Petrosal, promontorium (Hunt, 1989) |
| 122 | Paroccipital process (Neff, 1983; Hunt, 1987; Flynn et al., 1988) - Origin of m. |
| 123 | Paroccipital process, width (Petter, 1974; Veron, 1995) |
| 124 | Ossicles, malleus, anterior (long) process |
| 125 | Ossicles, malleus, processus gracilis and anterior lamina |
| 126 | Ossicles, malleus, head |
| 127 | Ossicles, malleus, head articulation surface, upper facet |
| 128 | Presphenoid, shape |
| 129 | Vagina processus hyoideus |
| 130 | External auditory meatus, dorsal wall |
| 131 | Internal carotid artery (Neff, 1983) |
| 132 | Arterial circulation, intracranial rete (Bugge, 1978) |
| 133 | Arterial circulation, major a1 arterial shunt (Bugge, 1978) |
| 134 | Arterial circulation, major a4 arterial shunt (Bugge, 1978; Neff, 1983; Wozencra |
| 135 | Arterial circulation, major anastomosis X (Bugge, 1978; Wozencraft, 1989) |
| 136 | Arterial circulation, major anastomosis Y (Bugge, 1978; Wozencraft, 1989) |
| 137 | Arterial circulation, major a2 arterial shunt (Bugge, 1978; Wozencraft, 1989) |
| 138 | M. sternomastoideus and m. cleidomastoideus fossa (location) |
| 139 | Sternomastoideus and cleidomastoideus fossa |
| 140 | Bullar configuration (Hunt, 1987) |
| 141 | Exoccipital, condyloid canal (occipital venous sinus) - Serves for the passage o |
| 142 | Supraoccipital |
| 143 | Condyles, emarginated causing the condyle to appear slightly lobed |
| 144 | Parietal, sagittal crest (adult males) |
| 145 | Parietal-supraoccipital, lambdoidal crest |
| 146 | Parietal, sagittal crest |
| 147 | Parietal-supraoccipital, lambdoidal crest, caudal view |
| 148 | I2 position (posterior edge) |
| 149 | I3, form (cross section) |
| 150 | I3, size |
| 151 | I1-I3, projection |
| 152 | I1-I3 formation |
| 153 | I1-I3 formation |
| 154 | I3-C1 occlusion |
| 155 | C1, size |
| 156 | C1, flanges |
| 157 | C1, shape |
| 158 | P1 |
| 159 | P1-1, relative size |
| 160 | P1, number of roots |
| 161 | P1 |
| 162 | P2, number of roots |
| 163 | P2, roots |
| 164 | P3, number or roots |
| 165 | P3, posterolingual cingulum |
| 166 | P3, lingual cusp |
| 167 | P3-3, size (when viewed from the buccal aspect) |
| 168 | P3, roots |
| 169 | P3, talonid |
| 170 | P4, number of cusps |
| 171 | P4, roots |
| 172 | P4, parastyle |
| 173 | P4, metacone or metastylar blade |
| 174 | P4, lingual lobe |
| 175 | P4, talon |
| 176 | P4, metastyle blade |
| 177 | P4, posterolingual cingulum |
| 178 | P4, talonid |
| 179 | P4, posterior accessory cusps - Flynn and Galiano (1982) considered P4 well deve |
| 180 | Carnassial shear, P4-M1 (well defined vertical facet) (Flynn and Galiano, 1982) |
| 181 | P4-M1 carnassial embrasure pit |
| 182 | M1, shape |
| 183 | M1, roots |
| 184 | M1, hypocone |
| 185 | M1, buccal lobes |
| 186 | M1, trigonid (or equivalent) |
| 187 | M1, trigonid |
| 188 | M1, talonid |
| 189 | M1, metaconid |
| 190 | M1, protoconid |
| 191 | M1, entoconid |
| 192 | M1, hypoconid |
| 193 | M1, hypoconulid |
| 194 | M1, small cusp between hypoconid and protoconid |
| 195 | M2, paracone and metacone |
| 196 | M2 |
| 197 | M2, hypocone |
| 198 | M2, roots |
| 199 | M2, shape |
| 200 | M2 |
| 201 | M2, roots |
| 202 | M2, cusps |
| 203 | M2- M2 relative size |
| 204 | M3 |
| 205 | Upper molars, cingulum |
| 206 | Buccal cingulum, upper molars |
| 207 | Diastema, I2 - I3 |
| 208 | Diastema, C1 - P1 (or to first postcanine tooth) |
| 209 | Diastema, P2 - P3 (or second and third postcanine teeth) |
| 210 | Diastema, P1 - P2 (or first two postcanine teeth) |
| 211 | Mandible, angular process |
| 212 | Mandible, mandibular symphysis |
| 213 | Mandible, mandibular condyle - Alveolar line defined as a line connecting the an |
| 214 | Mandible, medial shelf of angular process |
| 215 | dP3, number of accessory posterior cusps |
| 216 | dP3 talonid |
| 217 | dP3, lingual cusp |
| 218 | dP4, buccal lobes |
| 219 | dP3, accessory lingual cusp |
| 220 | Mental foramina |
| 221 | P4, anterior accessory cusp |
| 222 | Atlas, transverse process, posterior extension - M. levator scapulae attaches to |
| 223 | Atlas, alar and atlantal (intervertebral) foramen |
| 224 | Atlas, ventral arch, length |
| 225 | Atlas, transverse foramen (vertebral artery), posterior opening |
| 226 | Axis, cranial articular processes and ventral surface of dens (odontoid) process |
| 227 | Axis, spinous process |
| 228 | Axis, caudal spine of spinous process |
| 229 | Axis, ventral keel? |
| 230 | Cervical vertebrae, ventral keel on vertebrae 6 and 7 |
| 231 | Sacral vertebrae, spinous processes |
| 232 | Tail |
| 233 | Scapula, teres major process (axillary border) (Taylor, 1974) - A large teres ma |
| 234 | Scapula, metacromion-acromion processes - The m. acromiodeltoideus attaches to t |
| 235 | Scapula, metacromion process (shape) |
| 236 | Scapula, coracoid process |
| 237 | Scapula, supraspinus fossa (cranial border) |
| 238 | Scapula, overall shape |
| 239 | Thoracic vertebrae, number |
| 240 | Humerus, supracondylar (= entepicondyloid) foramen |
| 241 | Humerus, pectoral crest - Pectoral ridge starts proximally at the anterior edge |
| 242 | Humerus, deltoid crest - Deltoid crest starts proximally at the infraspinous fac |
| 243 | Humerus, olecranon fossa - Allows for greater arc movement of the antebrachium. |
| 244 | Humerus, distal condyle |
| 245 | Humerus, radial and coronoid fossas |
| 246 | Humerus, greater tuberosity, proximal end |
| 247 | Humerus, greater tuberosity, proximal end |
| 248 | Humerus, distal supracondyloid crest - Serves for the insertion of the extensor |
| 249 | Humerus, cross section |
| 250 | Humerus, deltoid and pectoral crest confluence |
| 251 | Ulna, olecranon process, medial and lateral ridges |
| 252 | Ulna, olecranon process, medial fossa with ventral-medial flange |
| 253 | Ulna, distal lateral shelf - Serves for the attachment of the anconeus. |
| 254 | Ulna, olecranon process |
| 255 | Ulna, olecranon, inclination (Taylor, 1974) |
| 256 | Radius, cross section |
| 257 | Radius, tubercle |
| 258 | Radius, distal expansion |
| 259 | Radius, head - articular surface |
| 260 | Manus, digit 1 (hallux) |
| 261 | Ilium, ventral iliac spine (King, 1966) |
| 262 | Pelvis, overall shape |
| 263 | Femur, trochanteric fossa |
| 264 | Femur, lesser trochanter |
| 265 | Femur, lesser trochanter, position - Lesser trochanter aligns with lateral edge |
| 266 | Femur, cross section |
| 267 | Tibia, cross section |
| 268 | Tibia-fibula, proximal fusion |
| 269 | Calcaneum, sustentaculum tali (Robinette and Stains, 1970) |
| 270 | Calcaneum, calcaneal tubercle or process |
| 271 | Calcaneum, medial tuberosity on calcaneal tubercle |
| 272 | Calcaneum, peroneal tubercle |
| 273 | Calcaneum, medial articular surface |
| 274 | Calcaneum, cuboid surface |
| 275 | Calcaneum, trochlear process |
| 276 | Calcaneum, posterior projection off of cuboid surface |
| 277 | Pes, digit 1 (pollex) |
| 278 | Baculum |
| 279 | Rhinarium, philtrum - Externally visible rhinarial tract that connects the rhina |
| 280 | Rhinarium, groove |
| 281 | Rhinarium, external nares |
| 282 | Rhinarium, dorsal exposure |
| 283 | Rhinarium, profile |
| 284 | External pinnae, aural posteroexternal bursa |
| 285 | External pinnae, posterior, subbursa lobe |
| 286 | External pinnae |
| 287 | Ear bursa |
| 288 | Perineal scent glands, males |
| 289 | Perineal glands |
| 290 | Perineal glands, male |
| 291 | Scrotum, position |
| 292 | Mammae |
| 293 | Perineal scent glands, females |
| 294 | Perineal glands, female |
| 295 | Anal glands |
| 296 | Feet, interdigital pads (manus and pes) |
| 297 | Feet, interdigital webbing of external foot pads |
| 298 | Feet, interdigital pads |
| 299 | Feet (manus), carpal (palmar) surface, central depression |
| 300 | Feet (manus), metacarpal pad(s) |
| 301 | Feet (manus), carpal pollical pad |
| 302 | Feet (manus), carpal pollical pad, size |
| 303 | Feet (manus), metacarpal pad(s), size |
| 304 | External pinnae, anterior surface |
| 305 | Feet (pes), plantar surface, central depression |
| 306 | Feet (pes), metatarsal pad(s) |
| 307 | Feet (pes), metatarsal surface (posterior to metatarsal pads) |
| 308 | Feet (pes), metatarsal pad(s) |
| 309 | Feet (pes), tarsal hallical pad |
| 310 | Feet (pes), tarsal hallical pad, size |
| 311 | Feet (pes), metatarsal pad(s), size |
| 312 | Head, dark face mask |
| 313 | Head, interoccular (between) eye patches |
| 314 | Head, rhinarial patch |
| 315 | Head, suboccular eye patches |
| 316 | Head, rostral line |
| 317 | Head, supraoccular eye patches |
| 318 | Neck, dorsal surface |
| 319 | Nuchal stripes |
| 320 | Neck, dorsal hair direction |
| 321 | Neck, sides |
| 322 | Body, spots |
| 323 | Body, pale shoulder spots |
| 324 | Body, dorsal crest (long dorsal hairs on mid-dorsal line) |
| 325 | Body, mid-dorsal stripe |
| 326 | Body, mid-dorsal stripe, color |
| 327 | Body, ventral surface |
| 328 | Feet |
| 329 | Legs |
| 330 | Tail, tip |
| 331 | Tail, hair length |
| 332 | Tail, dorsal line |
| 333 | External pinnae, posterior surface |
| 334 | External pinnae, tuft |
| 335 | Tail, fat storage |
| 336 | Tail, mobility |
| 337 | Cowpers (bulbourethral) gland |
| 338 | M. accessorius pedis |
| 339 | M. rhomboideus major |
| 340 | M. supinator longus (Windle and Parsons, 1897) |
| 341 | M. semitendinosus, caudal head (Windle and Parsons, 1897) |
| 342 | M. soleus (Windle and Parsons, 1897) |
| 343 | Cruciate sulcus (Radinsky, 1971, 1975; Carlsson, 1900) |
| 344 | Postlateral sulcus does not overlap lateral sulcus (Radinsky, 1975) |
| 345 | Presylvian sulcus (Radinsky, 1975) |
| 346 | Suprasylvian sulcus (Radinsky, 1975) |
| 347 | Vibrissae, inter-ramal tuft |
| 348 | Pupil, horizontally elongated |
| 349 | Marker chromosome (Wurster, 1969) |