@ARTICLE{TreeBASE2Ref20457,
author = {Takayuki Aoki and Haruhisa Suga and Mitsuro Hyakumachi and Mar?a Mercedes Scandiani and Kerry O'Donnell},
title = {Fusarium azukicola sp. nov., a novel exotic azuki bean root-rot pathogen in Hokkaido, Japan },
year = {2012},
keywords = {Glycine max, pathogenicity, Phaseolus vulgaris, phylogeny, SDS, taxonomy, Vigna angularis},
doi = {},
url = {http://},
pmid = {},
journal = {Mycologia},
volume = {},
number = {},
pages = {},
abstract = {We report on the phenotypic, molecular phylogenetic and pathogenic characterization of a novel azuki bean (Vigna angularis) root-rot (BRR) pathogen from Hokkaido, Japan, which is formally described herein as Fusarium azukicola. This species can be distinguished phenotypically from the other Phaseolus/Vigna BRR and soybean sudden-death syndrome (SDS) pathogens by the production of wider and longer 4-septate conidia cultured on SNA. Molecular phylogenetic analyzes of four anonymous intergenic loci, a portion of the translation elongation factor (EF-1α) gene and the nuclear ribosomal intergenic spacer region (IGS rDNA) strongly support the genealogical exclusivity of F. azukicola with respect to the other soybean SDS and BRR pathogens within Clade 2 of the F. solani species complex (FSSC). Evolutionary relationships of F. azukicola to other members of the SDS?BRR clade, however, are unresolved by phylogenetic analyses of the individual and combined datasets, with the exception of the IGS rDNA partition, which strongly supports it as a sister to the soybean SDS pathogen F. brasiliense. A previously published multilocus genotyping assay is updated to include primer probes that successfully distinguish F. azukicola from the other soybean SDS and BRR pathogens. Results of a pathogenicity experiment reveal that the F. azukicola isolates are able to induce root-rot symptoms on azuki bean, mung bean (Vigna radiata), kidney bean (Phaseolus vulgaris) and soybean (Glycine max), as well as typical SDS foliar symptoms on soybean. Our hypothesis is that F. azukicola evolved in South America and was introduced to Hokkaido, Japan, on azuki bean, but its possible route of introduction remains unknown. }
}
Matrix 1399 of Study 12400

Citation title:
"Fusarium azukicola sp. nov., a novel exotic azuki bean root-rot pathogen in Hokkaido, Japan ".

Study name:
"Fusarium azukicola sp. nov., a novel exotic azuki bean root-rot pathogen in Hokkaido, Japan ".

This study is part of submission 12400
(Status: Published).
Matrices
Title: plastid
Description: Legacy TreeBASE Matrix ID = M2204
Rows
Taxon Label |
Row Segments |
Characters 1?–30 |
Conradina brevifolia B.T. |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina brevifolia 159-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina brevifolia 168-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina brevifolia 197-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina canescens 128-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina canescens 130-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina canescens 142-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina etonia S.N. |
(none)
|
????AAAATAAATATTGGATATTATAGAAC |
Conradina etonia 111-1 |
(none)
|
??????AATAAATATTGGATATTATAGAAC |
Conradina glabra 109-1 |
(none)
|
?????????????????????????????? |
Conradina glabra 109-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina grandiflora 215-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina grandiflora 135-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina grandiflora 134-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina grandiflora 171-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina santarosea 133-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina santarosea 133-30 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Conradina verticillata |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium ashei 147 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium ashei 147-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium ashei 160-1 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium ashei 196-2 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium coccineum |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium dentatum |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Clinopodium georgianum |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Dicerandra densiflora |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Dicerandra thinicola |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Piloblephis rigida |
(none)
|
???ATAAATAAATATTGGATATTATAGAAC |
Stachydeoma graveolens 161-15 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Stachydeoma graveolens 161-24 |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Monarda fistulosa |
(none)
|
CCAATAAATAAATATTGGATATTATAGAAC |
Pycnanthemum muticum |
(none)
|
????????????????????ATTATAGAAC |
Mentha |
(none)
|
?????????????????????????????? |
Columns
None of the columns has a description.