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Matrix 14816 of Study 13537

About Citation title: "Historical biogeography and diversification of truffles in the Tuberaceae and their newly identified Southern hemisphere sister lineage".
About Study name: "Historical biogeography and diversification of truffles in the Tuberaceae and their newly identified Southern hemisphere sister lineage".
About This study is part of submission 13537 (Status: Published).

Matrices

Title: Fig4 Tuberaceae ITS LSU EF1a RPB2 Final

Rows

Taxon Label Row Segments Characters 1?–30
Underwoodia singeri mes161 Chile  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
Underwoodia beatonii JT28375 Australia  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
Underwoodia beatonii JT28380 Australia  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
Gymnohydnotrya echinulata clar4529  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
Gymnohydnotrya australiana OSC130601  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
L C02 EcM Salix humboldtiana Argentina  (none) TGCCGGTCCCT-CAATTGTCTCATGAGGCC
R8M8 7x EcM Nothofagus alpina Argentina  (none) TGCCGGTCCCT-CAATTGTCTCATGAGGCC
Dingleya JT31575 Australia  (none) TGTTGCTTCCC-CGGATGTC---TGACGCC
Nothojafnia cf thaxterii N10 Argentina  (none) TGTTGCTTCCC-CAGAAGTC---TGACGCC
Labyrinthomyces JT27750 Australia  (none) TGTTGCTTCCC-CGGAAGTC---TGACGCC
Reddellomyces JT27723 Australia  (none) TGTTGCTTCCC-CGGAAGTC---TGACGCC
Leppia JT28813 Australia  (none) TGTTGCTTCCC-CGGACGTC---TGACGCC
Leppia holotype Australia  (none) TGTTGCTTCCC-CGGATGTC---TGACGCC
Reddellomyces JT27724 Australia  (none) TGTTGCTTCCC-CAGCAGTC---TGACGCC
Reddellomyces JT4985 Australia  (none) TGTTGCTTCCC-CGGAAGTC---TGACGCC
Reddellomyces JT6873 Australia  (none) TGTTGCTTCCC-CAGCAGTC---TGACGCC
P5M4 5a EcM Nothofagus obliqua Argentina  (none) TGTTGCTTTCC-TGGGTGTC---TGACGCC
L C04 EcM Salix humboldtiana Argentina  (none) TGTTGCTTCCC-CAGACGTC---TGAGGCC
Choiromyces meandriformis DL Oregon  (none) TGTTGCTTCCC-CAGGAGTC---TGACGCC
Choiromyces alveolatus 97  (none) TGTTGCTTCCC-CAGGAGTC---TGACGCC
Choiromyces alveolatus HS2886  (none) TGTTGCTTCCC-CAGGAGTC---TGACGCC
Choiromyces meandriformis RH691 Iowa  (none) TGTTGCTTCCC-CAGGAGTC---TGACGCC
Tuber aestivum JT30500 Sweden  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
Tuber mesentericum CW105 Sweden  (none) AGTTGCTTCCC-CGGGAGTC---TGAAGCC
Tuber aestivum AF516786 Europe  (none) TGTTGCTTCCC-CGGGTGTC---TGACGCC
Tuber aestivum China GQ217542  (none) TGTTGCTTCCC-CGGGTGTC---TGATGAC
Tuber gennadii BM667 Spain  (none) TGTTGCTTCCC-CGGGAGTC---TGACGCC
Tuber gennadii JT9627 Spain paratype  (none) TGTTGCTTCCC-CGGGAGTC---TGACGCC
Tuber gennadii M1904 Italy  (none) TGTTGCTTCCC-CGGTAGTC---TGACGCC
Tuber anniae JT13209 Washington holotype  (none) TGTTGCTTTCC-CAGATGTC---TGAGGCC
Tuber borchii GB14 Italy  (none) ????????????????AGTC---TGAGGCT
Tuber borchii GB1 Italy  (none) ????????????????AGTC---TGAGGCC
Tuber anniae JT22695 Oregon  (none) TGTTGCTTTCC-CAGATGTC---TGAGGCC
Tuber asa M1828 Italy  (none) TGTTGCTTCCC-CAGATGTC---TGAGGCC
Tuber sp JT28121 Japan  (none) TTTTTCTTTTT-TATAAGTC---TGACGCC
Tuber sp8 K228 Japan  (none) TTTTTCTTTTT-TATAAGTC---TGACGCC
Tuber sp9 K214 Japan  (none) TATTAGAAACA-CTAGAGTC---TGACGCC
Tuber beyeleri JT32597 Oregon  (none) TGGAAATGCCC-CTAATGTC---TGAGGCC
Tuber canaliculatum JT28215 New Jersey  (none) CGTTGCCAATG-AATGAGTC---TGAGGCC
Tuber canaliculatum OSC59072 West Virginia  (none) CGTTGCCAATG-AATGAGTC---TGAGGCC
Tuber bellisporum JT11679 Oregon holotype  (none) TATTAAACCCT-TATAAGTC---TGAGGCC
Tuber bellisporum JT7270 Oregon paratype  (none) TATTAAACCCT-TATAAGTC---TGAGGCC
Tuber castellanoi JT19924 California paratype  (none) TATTTAAACCCTTATAAGTC---TGAGGAT
Tuber castellanoi JT28069 California holotype  (none) TATTTAATCCCTTATAAGTC---TGAGGAT
Tuber gibbosum JT26632 Washington  (none) TATTAAACACT-TATAAGTC---TGAGGCC
Tuber gibbosum JT30580 Oregon  (none) TATTAAACACT-TATAAGTC---TGAGGCC
Tuber oregonense JT30493 Oregon paratype  (none) TATTAAACACT-TATAAGTC---TGAGGCC
Tuber oregonense GB284 Oregon holotype  (none) TATTAAACACT-TATAAGTC---TGAGGCC
Tuber oregonense JT27985 Oregon paratype  (none) TATTAAACACT-TATAAGTC---TGAGGCC
Tuber liaotongense OSC87602 China  (none) ??????????????????????????????
Tuber sancarloensis ITCV181 Mexico holotype  (none) TGCCCCTAACA-CGGGAGTC---TGAGGCC
Tuber sancarloensis ITCV885 Mexico  (none) TGCCCTTAACA-GGGG-GTC---TGAGGCC
Tuber JT9769 Nepal  (none) TGTGACCGTCC-T---TGTC---TGAGGCC
Tuber sp ITCV884 Mexico  (none) TGTTGCTTTCC-CAGGAGTC---TGAGGCC
Tuber sp ITCV908 Mexico  (none) TGTTGCTTTCC-CAGGAGTC---TGAGGCC
Tuber brumale GB21 Italy  (none) TGTTGCTTTCA-CAGGAGTC---TGATGCC
Tuber brumale GB22 Italy  (none) TGTTGCTTTCA-CAGGAGTC---TGATGCC
Tuber californicum JT28058 California  (none) TGTTGCTTCCC-CAGAAGTC---TGAGGCC
Tuber cf borchii China  (none) TGTTGCTTCCC-CAGATGTC---TGAGGCC
Tuber dryophilum GB35 Italy  (none) TGTTGCTTCCC-CAGATGTC---TGAGGCC
Tuber dryophilum GB37 Italy  (none) TGTTGCTTCCC-CAGATGTC---TGAGGCC
Tuber excavatum BM100 Spain  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber excavatum China GQ217540  (none) TGTTGCTTTCC-CAGGTGTC---TGAGGCC
Tuber excavatum OSC80639 Italy  (none) TGTTGCTTTCC-CAGGTGTC---TGAGGCC
Tuber nitidum BM105 Spain  (none) ????????????????AGTC---TGAGGCC
Tuber ferrugineum MA2721 Italy  (none) TGTTGCTTTCC-CAGGCGTC---TGAGGCC
Tuber fulgens M2435 Italy  (none) TGTTGCTTCCC-CAGGTGTC---TGAGGCC
Tuber indicum A GB236 China  (none) TGTTGCTTCCA-TGGGCGTC---TGAGGTC
Tuber indicum A GB240 China  (none) TGTTGCTTCCA-CGGGCGTC---TGAGGTC
Tuber indicum B GB237 China  (none) TGTTGCTTCCA-CAGGTGTC---TGAGGTC
Tuber indicum B JT29410 Oregon  (none) TGTTGCTTCCA-CGGGTGTC---TGAGGTC
Tuber lyonii GA21 Georgia  (none) TGTTGCTTTCC-CAGGAGTC---TGAGGCC
Tuber lyonii OSC58244 Texas  (none) TGTTGCTTTCC-CAGGAGTC---TGAGGCC
Tuber magnatum GB12 Italy  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber magnatum GB13 Italy  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber magnatum JT19460 Italy  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber sp RH73 Iowa  (none) TGTTGCTTCCA-CAGTTGTC---TGACGCC
Tuber sp1 K201 Japan  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber sp2 K215 Japan  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber sp14 K186 Japan  (none) TGTTGCTTCCC-CAGATGTC---TGAGGCC
Tuber macrosporum JT13362 Italy  (none) TGTTGCTTCCC-CAGGAGTC---TGAGGCC
Tuber malacodermum JT32319 Spain  (none) TGTTGCTTTCC-CAGGTGTC---TGAGGCC
Tuber melanosporum GB200 Italy  (none) TGTTGCTTCCA-CAGGTGTC---TGAGGTC
Tuber multimaculatum OSC62169 Spain paratype  (none) TGTTGCTTTCCTCAGAAGTC---TGAGACC
Tuber panniferum JT12835 Spain  (none) TGTTGCTTCCC-CAGGAGTC---CGACGCC
Tuber pseudoexcavatum CJ408 China  (none) TGTTGCTTTCA-CAAGGGTC---TGACGCC
Tuber regimontanum ITCV909 Mexico holotype  (none) TGTTGCTTCCA-CAGGTGTC---TGACGTC
Tuber rufum GB213 Italy  (none) TGTTGCTTTCC-CAGGTGTC---TGAGGCC
Tuber shearii JT12498 North Carolina  (none) TGTTGCTTTCC-CAAGTGTC---TGATGCC
Tuber shearii OSC51052 North Carolina  (none) TGTTGCTTTCC-CAAGTGTC---TGATGCC
Tuber sphaerosporum JT12487 Oregon  (none) TGTTGCTTCCC-CAGATGTC---TGACGCC
Tuber sphaerosporum JT19772 Oregon  (none) TGTTGCTTCCC-CAGATGTC---TGACGCC
Tuber sp JT13224 West Virginia  (none) TGTTGCTTTCC-CAGGTGTC---TGAGGTC
Tuber sp ITCV910 Mexico  (none) TGTTGCTTTCC-CAGTTGTC---TGAGGCT
Tuber sp JT32567 Mexico  (none) CGTTGCTTTCC-CGGGTGTC---TGAGGCC
Tuber sp JT8755 Florida  (none) TGTTGCTTTCC-CAGGTGTC---TGATGCC
Tuber sp RH8270753 Iowa  (none) TGTTGCTTTCC-CAGTTGTC---TGAGGCC
Tuber sp TB10248 New York  (none) TGTTGCTTTCC-CAGTTGTC---TGAGGCC
Tuber spinoreticulatum U188 Maryland isotype  (none) TGTTGCTTTCC-CAGGTGTC---TGAGGCC
Helvella lacunosa MES218  (none) ??????????????????????????????
Helvella lacunosa MES286  (none) ??????????????????????????????
Helvella macropus MES198  (none) ??????????????????????????????
Balsamia MES84  (none) ??????????????????????????????
Balsamia SRC395  (none) ??????????????????????????????
Balsamia SRC868  (none) ??????????????????????????????
Underwoodia columnaris U42685  (none) ??????????????????????????????
Underwoodia singeri JT26159  (none) ??????????????????????????????
Gymnohydnotrya australiana JT19760  (none) ??????????????????????????????
Tuber aestivum OSC61974 Serbia  (none) ??????????????????????????????
Tuber aestivum GB202 Italy  (none) ??????????????????????????????
Tuber indicum B GB339 China  (none) ??????????????????????????????
Tuber panniferum JT4969 France  (none) ??????????????????????????????
Helvella acetabulum MES215  (none) ??????????????????????????????
Reddellomyces JT27799 Australia  (none) ??????????????????????????????
Dinglyea JT27686 Australia  (none) ??????????????????????????????
Dinglyea JT31036 Australia  (none) ??????????????????????????????
Dingleya JT27860 Australia  (none) ??????????????????????????????
Dingleya JT20122 Australia  (none) ??????????????????????????????
Labyrinthomyces JT25359 Australia  (none) ??????????????????????????????
Labyrinthomyces JT28801 Australia  (none) ??????????????????????????????
Tuber sp9 K213 Japan  (none) ??????????????????????????????
Tuber sp7 K408 Japan  (none) ??????????????????????????????
Tuber sp JT9953 Quebec  (none) ??????????????????????????????
Labyrinthomyces JT28821 Australia  (none) ??????????????????????????????

Columns

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