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Matrix 17663 of Study 14416

About Citation title: "Positive selection in the adhesion domain of Mus sperm Adams through gene duplications and function-driven complex formation".
About Study name: "Positive selection in the adhesion domain of Mus sperm Adams through gene duplications and function-driven complex formation".
About This study is part of submission 14416 (Status: Published).

Matrices

Title: Alignment for Figure 1

Description: Alignment of Adhesion domains for mammalian Adam sperm genes

Rows

Taxon Label Row Segments Characters 1?–30
Mus spicilegus Adam30  (none) GTAGAGAGGTGTGGAAATAAAATTGTGGAA
Mus spretus Adam30  (none) GTAGAGAGGTGTGGAAATAAAATTGTGGAA
Mus musculus musculus Adam30  (none) GTAGAGAGGTGTGGAAATAAAATTGTGGAA
Mus musculus domesticus Adam30  (none) GTAGAGAGGTGTGGAAATAAAATTGTGGAA
Mus caroli Adam30  (none) GTAGAGAGGTGTGGAAATAAAATTGTGGAA
Rattus norvegicus Adam30  (none) GTAGAGAGGTGTGGAAATAAAATTGTGGAA
Myotis lucifugus Adam30  (none) GTTAAGAGGTGCGGAAACAAAATTGTGGAA
Bos taurus Adam30  (none) GTTAAGAGATGTGGAAACAAAATTGTGGAA
Pteropus vampyrus Adam30  (none) GTTCAGAGATGTGGAAACAAAATCGTGGAA
Ochotona princeps Adam30  (none) ACTAAGAGATGTGGAAACAAAATTCTGGAA
Oryctolagus cuniculus Adam30  (none) ATTAAGAGATGTGGAAACAAAATTCTGGAA
Mustela putorius furo Adam30  (none) GTGGAGAGATGTGGAAATAAAATTGTGGAA
Ailuropoda melanoleuca Adam30  (none) GTGGAGAGATGTGGAAACAAAATTGTGGAA
Ictidomys tridecemlineatus Adam30  (none) AACAGCAGATGTGGAAACAGAATTATTGAA
Mus musculus domesticus Adam24  (none) TTGAAGGTCTGTGGGAATGGTATAGTTGAA
Mus musculus musculus Adam24  (none) TTGAAGGTCTGTGGGAATGGTATAGTTGAA
Mus spicilegus Adam24  (none) TTGAAGGTCTGTGGGAATGGTATAGTTGAA
Mus spretus Adam24  (none) TTGAAGGTCTGTGGGAATGGTATAGTTGAA
Mus caroli Adam24  (none) GTGAAGGTCTGTGGGAATGGTATAGTTGAA
Rattus norvegicus Adam24  (none) ATGAAGATCTGTGGGAACGGTGTAGTTGAT
Mus musculus musculus Adam26a  (none) CTGACAATATGTGGCAATAACTTGGTTGAA
Mus spretus Adam26a  (none) CTGACAATATGTGGCAATAACTTGGTTGAA
Mus musculus domesticus Adam26a  (none) CTGACAATATGTGGCAATAACTTGGTTGAA
Mus spicilegus Adam26  (none) CTGACCGTGTGTGGGAATAAGGTGGTTGAA
Mus musculus domesticus Adam26b  (none) CTGACCGTGTGTGGGAATAAGGTGGTTGAA
Mus musculus musculus Adam26b  (none) CTGACTGTGTGTGGGAATAAGGTGGTTGAA
Mus spretus Adam26b  (none) CTGACTGTGTGTGGGAATAAGGTGGTTGAA
Mus musculus domesticus Adam4a  (none) GTTCCTCGTTGTGGAAATAAGAGAGTGGAG
Mus musculus musculus Adam4a  (none) GTTCCTCGTTGTGGAAATAAGAGAGTGGAG
Mus spicilegus Adam4a  (none) GTTCCTCGTTGTGGAAATAAGAGAGTGGAG
Mus spretus Adam4a  (none) GTTCCTCGATGTGGAAATAAGAGAGTGGAG
Mus caroli Adam4a  (none) GTTCCTCGTTGTGGAAATAAGAAAGTAGAG
Mus musculus musculus Adam4b  (none) GTTCCTCGTTGTGGAAATAAGATAGTGGAG
Mus musculus domesticus Adam4b  (none) GTTCCTCGTTGTGGAAATAAGATAGTGGAG
Mus spicilegus Adam4b  (none) GTTCCTCGTTGTGGAAATAAGATAGTGGAG
Mus spretus Adam4b  (none) GTTCCTCGTTGTGGAAATAAGATAGTGGAG
Mus caroli Adam4b  (none) GTTCCTCGTTGTGGAAATAAGATAGTGGAG
Rattus norvegicus Adam4a  (none) GTTCCTCGTTGTGGAAATAAGGTAGTGGAT
Rattus norvegicus Adam4b  (none) GTTCCTCGTTGTGGAAATAAGATAGTGGAT
Oryctolagus cuniculus Adam6_1  (none) CAGACGCGCTGTGGAAACTTTTTAGTGGAA
Oryctolagus cuniculus Adam6_2  (none) CAGACGCGCTGTGGAAACTCTTTAGTGGAA
Rattus norvegicus Adam6  (none) TACAGGTTTTGTGGAAACTTCAAGATAGAT
Mus caroli Adam6a  (none) TATAACTTTTGTGGAAACTTCAAAATCGAT
Mus caroli Adam6b  (none) TATACGTTTTGTGGAAACTTCAAAGTAGAT
Mus musculus musculus Adam6a  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAT
Mus spicilegus Adam6a  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAC
Mus musculus domesticus Adam6a  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAT
Mus spretus Adam6a  (none) TATAGGTTTTGTGGAAACTTCAAAGTAGAC
Mus spicilegus Adam6b  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAC
Mus musculus domesticus Adam6b  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAT
Mus musculus musculus Adam6b  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAT
Mus spretus Adam6b  (none) TATAAGTTTTGTGGAAACTTCAAAGTAGAT
Mus musculus domesticus Adam1b  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus musculus musculus Adam1b  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus spicilegus Adam1b  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus spretus Adam1b  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus caroli Adam1b  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Cricetulus griseus Adam1b  (none) GCGACCCGTTGTGGAAATGGTGTGGTGGAG
Rattus norvegicus Adam1b  (none) GATGCCCATTGTGGAAACGGTGTGGTAGAG
Cavia porcellus Adam1  (none) GCTGCCACGTGTGGAAACGGTGTGGTGGAG
Heterocephalus glaber Adam1a  (none) GATGCCAGTTGTGGAAATGGTGAGGTGGAG
Oryctolagus cuniculus Adam1b  (none) GATGGAAACTGTGGAAACGGTGTGGTGGAC
Bos taurus Adam1b  (none) GATTCCACCTGTGGCAATGCCATTGTAGAA
Ovis aries Adam1b  (none) GCTTCCCGCTGTGGCGACGGCATTGTAGAT
Sus scrofa Adam1b  (none) AACGGCCGGTGTGGCAATGGTGTTGTGGAA
Oryctolagus cuniculus Adam1a  (none) CTTTCCCGCTGTGGAAACGGTGTGGTGGAG
Bos taurus Adam1a  (none) GCTTCCCGCTGTGGCGATGGCATTGTAGAA
Ovis aries Adam1a  (none) GCTTCCCGCTGTGGCGACGGCATTGTAGAA
Sus scrofa Adam1a  (none) AACGGCCGGTGTGGCAATGGTGTTGTGGAA
Cricetulus griseus Adam1a  (none) GCGACCCGTTGTGGAAATGGTGTGGTGGAG
Rattus norvegicus Adam1a  (none) GATGCCCATTGTGGAAACGGTGTGGTAGAG
Mus caroli Adam1a  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus musculus domesticus Adam1a  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus musculus musculus Adam1a  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus spicilegus Adam1a  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Mus spretus Adam1a  (none) GCTGCCAATTGTGGGAATGGTGTGGTGGAG
Oryctolagus cuniculus Adam2  (none) GATGCCGTTTGTGGTAACTCAATAGTGGAA
Myotis lucifugus Adam2  (none) GTTGGAGTTTGTGGTAATAAAAAAGTGGAA
Ictidomys tridecemlineatus Adam2  (none) GCGGCGGTGTGTGGGAATAAGGTTGTGGAG
Mus musculus domesticus Adam2  (none) ATGGCGGTCTGTGGGAATGGAGAGGTGGAA
Mus musculus musculus Adam2  (none) ATGGCGGTCTGTGGGAATGGAGAGGTGGAA
Mus spicilegus Adam2  (none) ATGGCGGTCTGTGGGAATGGAGAGGTGGAA
Mus spretus Adam2  (none) ATGGCGGTCTGTGGGAATGGAGAGGTGGAA
Mus caroli Adam2  (none) ATGGCGGTCTGTGGGAATGGAGAGGTGGAA
Rattus norvegicus Adam2  (none) ATGGCAGTCTGTGGGAATGGAGAGTTGGAA
Cavia porcellus Adam2  (none) AACCCGGTCTGCGGCAATAACAGGGTGGAA
Bos taurus Adam2  (none) AGTGCGGTTTGTGGTAATGGAAAAGTTGAA
Sus scrofa Adam2  (none) AGTGCAGTTTGTGGGAATGGAGAAGTCGAA
Vicugna pacos Adam2  (none) AGTGCAGTGTGTGGTAATGGAGAAGTCGAA
Equus caballus Adam2  (none) GATGCAGAGTGTGGTAATCAACAAGTGGAA
Felis catus Adam2  (none) TCTGTGGTTTGTGGTAATGGACAAGTGGAA
Ailuropoda melanoleuca Adam2  (none) GCTGCGGTTTGTGGTAATGGACAAGTGGAA
Felis catus Adam7  (none) ------------------------------
Canis lupus familiaris Adam7  (none) ------------------------------
Mustela putorius furo Adam7  (none) ------------------------------
Ailuropoda melanoleuca Adam7  (none) ------------------------------
Equus caballus Adam7  (none) ------------------------------
Vicugna pacos Adam7  (none) ------------------------------
Pteropus vampyrus Adam7  (none) ------------------------------
Sus scrofa Adam7  (none) ------------------------------
Bos taurus Adam7  (none) ------------------------------
Tursiops truncatus Adam7  (none) ------------------------------
Myotis lucifugus Adam7  (none) ------------------------------
Oryctolagus cuniculus Adam7  (none) ------------------------------
Ictidomys tridecemlineatus Adam7  (none) ------------------------------
Rattus norvegicus Adam7  (none) ------------------------------
Mus musculus domesticus Adam7  (none) ------------------------------
Mus caroli Adam7  (none) ------------------------------
Mus musculus musculus Adam7  (none) ------------------------------
Mus spicilegus Adam7  (none) ------------------------------
Mus spretus Adam7  (none) ------------------------------
Cavia porcellus Adam7  (none) ------------------------------
Oryctolagus cuniculus Adam32  (none) ------------------------------
Tursiops truncatus Adam32  (none) GCATCAATCTGTGGAAATGGCAGAGTGGAG
Sus scrofa Adam32  (none) GCATCAATCTGTGGCAATGGCAGAGTGGAG
Bos taurus Adam32  (none) ACAGAAATCTGTGGCAATGGCAGAGTGGAG
Mustela putorius furo Adam32  (none) GCAGCACTCTGCGGCAACGGCAGAGTGGAG
Canis lupus familiaris Adam32  (none) ACATCAATCTGTGGCAATGGCAGAGTGGAG
Ailuropoda melanoleuca Adam32  (none) GCATCAATCTGTGGTAACGGCAAAGTGGAG
Equus caballus Adam32  (none) CAATCCACGTGTGGCAACCGCAGAGTGGAG
Myotis lucifugus Adam32  (none) AAAGCAGTCTGTGGCAACGGCAAAGTGGAG
Cavia porcellus Adam32  (none) ------------------------------
Rattus norvegicus Adam32  (none) ------------------------------
Mus caroli Adam32  (none) ------------------------------
Mus musculus domesticus Adam32  (none) ------------------------------
Mus musculus musculus Adam32  (none) ------------------------------
Mus spicilegus Adam32  (none) ------------------------------
Mus spretus Adam32  (none) ------------------------------
Mus musculus domesticus Adam3  (none) GGATCGTATTGTGGTAACCATCTCCTGGAG
Mus musculus musculus Adam3  (none) GGATCGTATTGTGGTAACCATCTCCTGGAG
Mus spicilegus Adam3  (none) GGATCGTATTGTGGTAACCATCTCCTGGAG
Mus spretus Adam3  (none) GGATCGTATTGTGGTAACCATCTCCTGGAG
Mus caroli Adam3  (none) GGATCGTATTGTGGTAACCATCTCCTGGAG
Rattus norvegicus Adam3  (none) GCAAAAGTTTGTGGTAACTACATCCTGGAG
Oryctolagus cuniculus Adam3  (none) TCTGGAACTTGCGGCAATGGAATTCTGGAA
Felis catus Adam3  (none) ------ATTTGTGGTAATAAAATTGTGGAA
Canis lupus familiaris Adam3  (none) ------GCTTGTGGCAATGGAATTCTGGAA
Mustela putorius furo Adam3  (none) ------GCTTGTGGCAATGGAATTTTGGAA
Ailuropoda melanoleuca Adam3  (none) ------GCTTGTGGCAATGGAATTTTGGAA
Equus caballus Adam3  (none) ------ACTTGTGGCAATCAGGTTTTGGAA
Sus scrofa Adam3  (none) ------CAGAAGAAAAATCATACTGTGATT
Myotis lucifugus Adam3  (none) ------GAATGTGGCAATGGAATTGTGGAA
Cavia porcellus Adam3  (none) TCTGCCTCATGTGGCAATGGAATTGTGGAA
Bos taurus Adam3  (none) ------ATTTGCGGCAATGGAGTTCTGGAG
Ictidomys tridecemlineatus Adam3  (none) CCACCTGCTTGTGGAAATGGAGTTGTGGAA
Equus caballus Adam18  (none) CAATCAGTGTGTGGTAATGGGATTTTGGAA
Pteropus vampyrus Adam18  (none) CAATCAGTGTGTGGTAATGGAATTTTGGAA
Felis catus Adam18  (none) CAATCAGTATGTGGTAATGGGATTTTGGAA
Bos taurus Adam18  (none) CAATCAGTATGTGGTAATGGGATTTTGGAA
Sus scrofa Adam18  (none) CAATCGGTGTGTGGTAATGGGATTTTGGAA
Ictidomys tridecemlineatus Adam18  (none) AAACCAGTTTGTGGTAATGGAATTTTGGAA
Oryctolagus cuniculus Adam18  (none) CAAGCTGTGTGTGGTAATGGGGTTTTGGAA
Myotis lucifugus Adam18  (none) CAATCAGTGTGTGGTAATGGGATTTTGGAA
Rattus norvegicus Adam18  (none) CAATCCGTGTGCGGCAATGGAATCGTGGAA
Mus spicilegus Adam18  (none) CAAGCCGTGTGTGGCAATGGAATCATGGAA
Mus spretus Adam18  (none) CAAGCCGTGTGTGGCAATGGAATCATGGAA
Mus musculus musculus Adam18  (none) CAAGCCGTGTGTGGCAATGGAATCATGGAA
Mus caroli Adam18  (none) CAAGCCGTGTGTGGCAATGGAATCATGGAA
Mus musculus domesticus Adam18  (none) CAAGCCGTGTGTGGCAATGGAATCATGGAA
Mustela putorius furo Adam5  (none) ------------------------------
Ailuropoda melanoleuca Adam5  (none) ------------------------------
Felis catus Adam5  (none) ------------------------------
Canis lupus familiaris Adam5  (none) ------------------------------
Equus caballus Adam5  (none) ------------------------------
Sus scrofa Adam5  (none) ------------------------------
Bos taurus Adam5  (none) ------------------------------
Myotis lucifugus Adam5  (none) ------------------------------
Cavia porcellus Adam5  (none) ------------------------------
Ictidomys tridecemlineatus Adam5  (none) ------------------------------
Rattus norvegicus Adam5  (none) ------------------------------
Mus caroli Adam5  (none) ------------------------------
Mus spretus Adam5  (none) ------------------------------
Mus musculus domesticus Adam5  (none) ------------------------------
Mus musculus musculus Adam5  (none) ------------------------------
Mus spicilegus Adam5  (none) ------------------------------

Columns

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