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Matrix 18088 of Study 14534

About Citation title: "Interannual variation and host affiliations of endophytic fungi associated with ferns at La Selva, Costa Rica".
About Study name: "Interannual variation and host affiliations of endophytic fungi associated with ferns at La Selva, Costa Rica".
About This study is part of submission 14534 (Status: Published).

Matrices

Title: CRFSATE

Rows

Taxon Label Row Segments Characters 1?–30
Verticillium insectorum AB214655  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Xylaria cubensis AB376683  (none) ------------------------------
Xylaria cubensis AB376701  (none) ------------------------------
Xylaria curta AB376702  (none) ------------------------------
Annulohypoxylon moriforme AB376706  (none) ------------------------------
Xylaria laevis AB376709  (none) ------------------------------
Xylaria cubensis AB376715  (none) ------------------------------
Xylaria cubensis AB376725  (none) ------------------------------
Hypoxylon haematostroma AB376728  (none) ------------------------------
Hypoxylon perforatum AB376735  (none) ------------------------------
Hypoxylon cf symphyon AB376769  (none) ------------------------------
Hypoxylon dieckmannii AB376813  (none) ------------------------------
Hypoxylon duranii AB376815  (none) ------------------------------
Hypoxylon cf subgilvum AB376816  (none) ------------------------------
Hypoxylon cf trugodes AB376817  (none) ------------------------------
Annulohypoxylon nitens AB376819  (none) ------------------------------
Hypoxylon macrocarpum AB376824  (none) ------------------------------
Hypoxylon monticulosum AB376827  (none) ------------------------------
Chaetomium globosum AB449688  (none) ------------------------------
Guignardia sawadae AB454292  (none) ------------------------C-TGCG
Guignardia bidwellii AB454313  (none) ------------------------C-TGCG
Guignardia philoprina AB454319  (none) ------------------------C-TGCG
Guignardia alliacea AB454327  (none) ------------------------C-TGCG
Xylaria polymorpha AB512362  (none) ------------------------------
Roussoella hysterioides AB524622  (none) ------------------------------
Roussoella pustulans AB524623  (none) ------------------------------
Roussoellopsis tosaensis AB524625  (none) ------------------------------
Acremonium brachypenium AB540496  (none) ------------------------------
Acremonium dichromosporum AB540498  (none) ------------------------------
Geosmithia cylindrospora AF033386  (none) ------------------------------
Geosmithia emersonii AF033387  (none) ------------------------------
Geosmithia argillacea AF033389  (none) ------------------------------
Penicillium roseopurpureum AF033415  (none) ------------------------------
Penicillium waksmanii AF033417  (none) ------------------------------
Penicillium sartoryi AF033421  (none) ------------------------------
Penicillium westlingii AF033423  (none) ------------------------------
Penicillium paxilli AF033426  (none) ------------------------------
Chaetosphaeria ovoidea AF064641  (none) ------------------------------
Exserohilum mcginnisii AF081453  (none) ------------------------------
Annulatascus hongkongensis AF132319  (none) ------------------------------
Striatosphaeria codinaeophora AF178546  (none) ------------------------------
Ophiosphaerella agrostis AF191550  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Nemania aenea Var aureolatum AF201704  (none) ----CAAGGTCTCGGTTGGTGAACC-AGCG
Bionectria coronata AF210667  (none) ------------------------------
Bionectria pityrodes AF210672  (none) ------------------------------
Phaeosphaeriopsis glauco punctata AF250819  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Phaeosphaeriopsis obtusispora AF250822  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Phaeosphaeriopsis agavensis AF250823  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Drechslera avenae AF260327  (none) ----CAGGTCTCCCGTAGGTGAACC-TGCG
Microascus cirrosus AF275539  (none) ------------------------------
Pseudozyma flocculosa AF294690  (none) ----CAAGGTTTCTGTAGGTGAACC-TGCA
Pseudozyma aphidis AF294699  (none) ----CAAGGTATCTGTAGGTGAACC-TGCA
Magnaporthe grisea AF362554  (none) ------------------------------
Neurospora sublineolata AF388927  (none) -----------------GGTGAA-C-AGCG
Gelasinospora calospora AF388931  (none) -----------------GGTGAACC-AGCG
Microascus longirostris AF400865  (none) ------------------------------
Pestalotiopsis sinensis AF409966  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Pestalotiopsis versicolor AF409993  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Lanceispora sp BCP 3574 AF452032  (none) ------------------------------
Lanceispora sp BCP 3536 AF452034  (none) ------------------------------
Lanceispora sp HKUCC 7284 AF452035  (none) ------------------------------
Leiosphaerella sp HKUCC 7685 AF452036  (none) ------------------------------
Leiosphaerella sp HKUCC 6135 AF452037  (none) ------------------------------
Zignoella pulviscula AF466091  (none) ------------------------------
Taphrina caerulescens AF492081  (none) ------------------------------
Taphrina populina AF492106  (none) ------------------------------
Colletotrichum fragariae AJ301912  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Nemania chestersii AJ390430  (none) ------------------------------
Drechslera catenaria AY004803  (none) -------------CGTAGGTGAACC-TGCG
Drechslera andersenii AY004805  (none) ------------CCGTAGGTGAACC-TGCG
Hypoxylon fragiforme AY083829  (none) ------------------------------
Hyponectria buxi AY083834  (none) ------------------------------
Cladosporium colocasiae AY251075  (none) ------------------------------
Alternaria malorum AY251081  (none) -------------------TGAAGG-CGGG
Moristroma quercinum AY254051  (none) -----------------GGTGAACCATGCG
Moristroma japonicum AY254052  (none) ------------------------------
Teratosphaeria macowanii AY260096  (none) ----CAAGGTCTCCGTAGGTGAACC-TGCG
Annulatascus biatriisporus AY316352  (none) ------------------------------
Annulatascus velatisporus AY316354  (none) ------------------------------
Camarops petersii AY346265  (none) ------------------------------
Camarops tubulina AY346266  (none) ------------------------------
Ceratosphaeria lampadophora AY346270  (none) ------------------------------
Ophioceras tenuisporum AY346295  (none) ------------------------------
Stilbocrea macrostoma AY489725  (none) ------------------------------
Crinula caliciiformis AY544680  (none) ------------------------------
Lasiosphaeria rugulosa AY587952  (none) ------------------------------
Gelasinospora endodonta AY681191  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Rosellinia australis AY908997  (none) ------------------------------
Penicillium citrinum DQ123644  (none) ------------------------------
Cornipulvina ellipsoides DQ231441  (none) ------------------------------
Erythromada lanciospora DQ231442  (none) ------------------------------
Holwaya mucida DQ257356  (none) ------------------------------
Colletotrichum boninense DQ286167  (none) ------------------------------
Colletotrichum agaves DQ286221  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Davidiella tassiana DQ289799  (none) ------------------------------
Magnaporthe salvinii DQ341498  (none) ------------------------------
Physalospora zeicola DQ377881  (none) ------------------------------
Peziza badia DQ384574  (none) ------------------------------
Microascus trigonosporus DQ470958  (none) ------------------------------
Bulgaria inquinans DQ470960  (none) ------------------------------
Ophiostoma Cf rectangulosporium DQ539538  (none) ------------------------------
Cladosporium sphaerospermum DQ780351  (none) ------------------------------
Physalospora pyricola DQ810230  (none) ------------------------------
Annulohypoxylon atroroseum DQ840060  (none) ------------------------------
Hypoxylon monticulosum DQ840067  (none) ------------------------------
Hypoxylon subgilvum DQ840068  (none) ------------------------------
Nemania aenea DQ840070  (none) ------------------------------
Nemania chestersii DQ840072  (none) ------------------------------
Nemania serpens DQ840075  (none) ------------------------------
Rosellinia corticium DQ840078  (none) ------------------------------
Microdiplodia hawaiiensis DQ885897  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Teratosphaeria maxii DQ885899  (none) -------GGTCTCCGTAGGTGAACC-TGCG
Camarosporium mamanes DQ885900  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Teratosphaeria alistairii DQ885901  (none) ----CAAGGTCTCCGTAGGTGAACC-TGCG
Peziza infossa DQ974817  (none) ------------------------------
Xylaria venosula EF026149  (none) -----------TCCGTAGGTGAACC-TGCG
Spadicoides atra EF204506  (none) ------------------------------
Spadicoides bina EF204507  (none) ------------------------------
Spadicoides verrucosa EF204508  (none) ------------------------------
Acremonium alcalophilum EF543834  (none) ------------------------------
Pichia misumaiensis EF550306  (none) ------------------------------
Pichia lachancei EF550313  (none) ------------------------------
Aspergillus persii EF661399  (none) ------------------------------
Aspergillus sclerotiorum EF661401  (none) ------------------------------
Aspergillus bridgeri EF661404  (none) ------------------------------
Aspergillus sulphureus EF661409  (none) ------------------------------
Aspergillus elegans EF661414  (none) ------------------------------
Aspergillus ochraceus EF661420  (none) ------------------------------
Aspergillus melleus EF661426  (none) ------------------------------
Davidiella macrospora EF679369  (none) ------------------------------
Trichocoma paradoxa EU021600  (none) ------------------------------
Alternaria thalictrigena EU040211  (none) ----CAAGGTCTCCGTAGGTGAACC-TGCG
Ascocoryne cylichnium EU107266  (none) ------------------------------
Camaropella pugillus EU481406  (none) ------------------------------
Camaropella lutea EU481407  (none) ------------------------------
Capronia semiimmersa EU514695  (none) ------------------------------
Phialophora europaea EU514698  (none) ------------------------------
Phialophora reptans EU514699  (none) ------------------------------
Phialophora sessilis EU514700  (none) ------------------------------
Muraeriata africana EU527995  (none) ------------------------------
Muraeriata collapsa EU527996  (none) ------------------------------
Williopsis saturnus Var saturnus EU541541  (none) ------------------------------
Williopsis saturnus Var suaveolens EU544674  (none) ------------------------------
Anthostomella brabeji EU552098  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Anthostomella proteae EU552101  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Camarosporium brabeji EU552105  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Camarosporium leucadendri EU552106  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Capronia kleinmondensis EU552107  (none) -----------TCCGTAGGTGAACC-TGCG
Drechslera erythrospila EU552124  (none) ----CAAGGTCTCCGTAGGTGAACC-TGCG
Saccharata capensis EU552130  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Lophiostoma cynaroidis EU552138  (none) AGAACAACCGTTCCGTAGGTGAACC-TGCG
Lophiostoma fuckelii EU552139  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Lophiostoma macrostomum EU552141  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Lophiostoma chamaecyparidis EU552143  (none) CGCCTGGCTGTTCCGTAGGTGAACC-TGCG
Botryosphaeria Cf protearum EU552144  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Saccharata proteae EU552145  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Pyrenochaeta inflorescentiae EU552153  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Teratosphaeria parva EU707874  (none) -----------------GGTGAACC-TGCG
Teratosphaeria proteae arboreae EU707884  (none) ------------------------------
Xylaria curta EU715605  (none) ----------------------ACC-TGCG
Rosellinia necatrix EU715607  (none) --------GTCTCCGTTGGTGAACC-AGCG
Neurospora terricola EU715671  (none) --------GTCTCCGTTGGTGAACC-AGCG
Sordaria fimicola EU918704  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Lasiosphaeria ovina EU940159  (none) ------------------------------
F003  (none) ------------------------C-AGCG
F046  (none) ------------------------------
F051  (none) ---------------------------GCG
F070  (none) ---------------------------GCG
F072  (none) ------------------------A-CACG
F084  (none) ----------------------------CG
F101  (none) ------------------------------
F108  (none) ------------------------------
F114  (none) ------------------------------
F121  (none) ------------------------------
F136  (none) ------------------------------
F151  (none) ------------------------------
F152  (none) ------------------------------
F157  (none) ------------------------------
F160  (none) ------------------------------
F161  (none) ------------------------------
F163  (none) -----------------------------C
F166  (none) ------------------------------
F167  (none) ------------------------------
F170  (none) ------------------------------
F172  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
F174  (none) ------------------------------
F175  (none) ------------------------------
F176  (none) ------------------------------
F179  (none) ------------------------------
F185  (none) ------------------------------
F187  (none) ------------------------------
F188  (none) ------------------------------
F190  (none) ------------------------------
F193  (none) ------------------------------
F194  (none) ------------------------------
F195  (none) -----------------------------A
F198  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
F199  (none) ----AAACCGTTCCGTAGGTGAACC-TGCG
F201  (none) ---------------------------TTC
F234  (none) ------------------------C-TGCG
F237  (none) ------------------------C-TGCG
F242  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
F246  (none) ----AAACCGTTCCGTAGGTGAACC-TGCG
F247  (none) ----TAACTTAATCACAGGTGAACC-TGCG
F249  (none) ------------------------------
F252  (none) ------------------------------
F253  (none) ------------------------C-TGCG
F256  (none) ------------------------------
F259  (none) -----------------------AC-AGCG
F260  (none) ------------------------------
F261  (none) ---------------------------GCG
F271  (none) ------------------------------
F276  (none) ------------------------------
F292  (none) ------------------------------
F295  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
F299  (none) --------------------------CAGC
F308  (none) ------------------------------
F321  (none) ------------------------------
F327  (none) ----------------------ACC-AGCG
F337  (none) ----CAAGGTCTCCGTAGGTGAACC-AGCG
F342  (none) ------------------------------
F355  (none) ------------------------------
F359  (none) ------------------------------
F365  (none) ------------------------------
F388  (none) ------------------------------
F406a  (none) ------------------------------
F411  (none) ------------------------------
F416  (none) ------------------------------
F448  (none) ------------------------------
F476  (none) ------------------------------
F481  (none) ------------------------------
F488  (none) ----ACAAGGTCTCGTAGGTGAACC-AGCG
F489  (none) ------------------------------
F490a  (none) ------------------------------
F491  (none) ------------------------------
F493  (none) ------------------------------
F496  (none) ------------------------------
F498  (none) ------------------------------
F504  (none) ------------------------------
F516  (none) ------------------------------
F518  (none) ----CAAGGTCTCCGTAGGTGAACC-AGCG
F520  (none) ------------------------------
F524  (none) ------------------------------
F528  (none) ------------------------------
F530  (none) ------------------------------
F535  (none) ------------------------------
F537  (none) ------------------------------
F538  (none) ------------------------------
F540  (none) ------------------------------
F541  (none) ------------------------------
F543  (none) ----CAAGGTCTCCGTAGGTGAACC-AGCG
F545  (none) ------------------------------
F546  (none) ------------------------------
F560  (none) ------------------------------
Saccharata proteae FJ150707  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Gaeumannomyces medullaris FJ176854  (none) ------------------------------
Amphisphaeria umbrina FJ176863  (none) ------------------------------
Ascocoryne sarcoides FJ176886  (none) ------------------------------
Saccharata kirstenboschensis FJ372392  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Penicillium simile FJ376592  (none) ------------------------------
Guignardia citricarpa FJ538315  (none) ----CAAGGTTTCCGTAGGTGAACC-TGCG
Physalospora vaccinii FJ588249  (none) ------------------------------
Lauriomyces bellulus FJ839658  (none) ------------------------------
Lauriomyces heliocephalus FJ839659  (none) ------------------------------
Bipolaris zeicola GQ253957  (none) ------------------------------
Mycoarachis inversa GQ505991  (none) ------------------------------
Ophiostoma rectangulosporium GU134171  (none) ------------------------------
Monilochaetes infuscans GU180626  (none) ------------------------------
Xylaria striata GU300089  (none) -----------TCCGTAGGTGAACC-TGCG
Xylaria haemorrhoidalis GU322464  (none) -----------TCCGTAGGTGAACC-TGCG
Xylaria arbuscula Var plenofissura GU339495  (none) -----------TCCGTAGGTGAACC-TGCG
Xylaria venosula GU797434  (none) -----------------GGTGAACC-TGCG
Mycoleptodiscus indicus GU980693  (none) ------------------------------
Cladosporium oxysporum HM148119  (none) ------------------------------
Lasiosphaeriella noonae daniae HM171284  (none) ------------------------------
Leptosporella gregaria HM171289  (none) ------------------------------
Pestalotiopsis sydowiana HM190154  (none) -----------------------------G
Ophiostoma rectangulosporium HM363177  (none) ------------------------------
Penicillium minioluteum HM469414  (none) -----------TCCGTAGGTGAACC-TGCG
Nectria berolinensis HM484543  (none) ------------------------------
Nectria lamyi HM484544  (none) ------------------------------
Nectria miltina HM484547  (none) ------------------------------
Nectria pyrrhochlora HM484570  (none) ------------------------------
Nectria zanthoxyli HM484571  (none) ------------------------------
Nectria lamyi HM534898  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Nautosphaeria cristaminuta HQ111009  (none) ------------------------------
Remispora galerita HQ111015  (none) ------------------------------
Nemania serpens HQ115648  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Penicillium hirsutum HQ225719  (none) ------------------------------
Verticillium insectorum HQ248107  (none) ------------------------------
Pestalotiopsis theae HQ832793  (none) ----CAAGGTCTCCGTTGGTGAACC-AGCG
Puccinia popowiae JF263495  (none) --------------GTAGGTGAACC-TGCG
Nectriopsis squamulosa U17423  (none) ------------------------------
Lanspora coronata U46889  (none) ------------------------------
Williopsis saturnus Var subsufficiens U75960  (none) ------------------------------
Williopsis saturnus Var mrakii U94929  (none) ------------------------------

Columns

None of the columns has a description.