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Taxa
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Matrix 20136 of Study 15140
Citation title: "Codon-based phylogenetics introduces novel flagellar gene markers to oomycete systematics".
Study name: "Codon-based phylogenetics introduces novel flagellar gene markers to oomycete systematics".
This study is part of submission 15140
(Status: Published).
Matrices
Title: OCM1 AA exc3
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Achlya racemosa | (none) | -----------------AHVDTPKGDINMD |
| Achlya radiosa | (none) | ------------------------------ |
| Albugo candida | (none) | KNYQGNDCSDRTCGFGYAHVDTPKGDINFD |
| Albugo laibachii | (none) | KNYQGNDCSDRTCGFGYAHVDTPKGDINFD |
| Aphanomyces astaci | (none) | ---AGNDCAQRVCPFGFAHIDTPKGDLNMD |
| Aphanomyces cladogamus | (none) | -------------PFGFAHVDTPKGDLNMD |
| Aphanomyces cochlioides | (none) | KNYMGNDCAERICPFGYAHVDTPKGDLDMD |
| Aphanomyces euteiches | (none) | KNYMGNDCAERICPFGYAHVDTPKGDLDMD |
| Apodachlya brachynema | (none) | -----------ICPFAYAHVDTPKGDLNFD |
| Dictyuchus monosporus | (none) | ----------RVCPFG?A?VD???GDINMD |
| Ectocarpus siliculosus | (none) | SGYMANDCSERVCPFGLAHVDSPKGDLNMD |
| Halophytophthora operculata | (none) | --YQGNDCSDRTCLFTYAHVDTPRGDLDMD |
| Halophytophthora polymorphica | (none) | --YEGNDCSQRTCQFGYAHADTPKGDINMD |
| Halophytophthora vesicula | (none) | ---EGNDCSQRTCQFGYAHADTPKGDINMD |
| Lagenidium caudatum | (none) | ---QGNDCGDRTCLFGHAFVDTPKGDINMD |
| Myzocytiopsis sp | (none) | ---QGNDCADRTCLFGYAHVDTPRGDINMD |
| Phytophthora capsici | (none) | KNYQGNDCMDRTCQFGYAHTDTPKGDINMD |
| Phytophthora cinnamomi | (none) | ---QGNDCMDRTCQFGYAHADTPKGDINMD |
| Phytophthora cryptogea | (none) | ------------VSFGYAHADTPKGDINMD |
| Phytophthora drechsleri | (none) | ------------VSFGYAHADTPKG??N?D |
| Phytophthora erythroseptica | (none) | ------------CQFGYAHADTPKGDINMD |
| Phytophthora fragariae | (none) | ---QGNDCMERTCQFGYAHVDTPKGDIDMD |
| Phytophthora gonapodyides | (none) | --YEGNDCLDRTCQFGYAHADTPKGDINMD |
| Phytophthora heveae | (none) | --YQGNDCLDRTCQFDYAHADTPKGDINMD |
| Phytophthora hibernalis | (none) | -------------CIWLCHADTPKGDINMD |
| Phytophthora humicola | (none) | --YEGNDCLDRTCQ?DFAHADTPKGDINMD |
| Phytophthora ilicis | (none) | --YHGNDCLDRTCQFGYAHADTPKGDINMD |
| Phytophthora infestans | (none) | KNYEGNDCLDRTCQFGYAHADTPKGDIDYD |
| Phytophthora iranica | (none) | -------------CIRLCHADTPKGDINY? |
| Phytophthora katsurae | (none) | --YQGNDCLDRTCQFDYAHADTPKGDINMD |
| Phytophthora lateralis | (none) | -------------AFGYAHADTPKGDINMD |
| Phytophthora medicaginis | (none) | ------------VSFGYAHADTPKGDINMD |
| Phytophthora megasperma | (none) | ------------------------------ |
| Phytophthora mirabilis | (none) | --YEGNDCLDRTCQFGYAHADTPKGDIDYD |
| Phytophthora multivesiculata | (none) | ----------------YAHAVHAEGHQHAH |
| Phytophthora nicotianae | (none) | -------------CIRLRHADTPKGDINYD |
| Phytophthora phaseoli | (none) | --YEGNDCLDRTCQFGYAHADTPKGDIDYD |
| Phytophthora psychrophila | (none) | ---HGNDCLDRTCQFGYAHADTPKGDINMD |
| Phytophthora ramorum | (none) | KNYQGNDCLDRTCQFGYAHADTPKGDINMD |
| Phytophthora rubi | (none) | KNYQGNDCMERTCQFGYAHVDTPKGDIDMD |
| Phytophthora sinensis | (none) | ------------VQFGYAHVDTPKGDINMD |
| Phytophthora sojae | (none) | KNYQGNDCMDRTCQFGYAHVDTPKGDINMD |
| Phytophthora syringae | (none) | --YQGNDCFDRTCPFAYAHADTPKGDINMD |
| Phytophthora vignae | (none) | ------------VQFGYAHVDTPKGDINMD |
| Phytopythium helicoides | (none) | --------ARETCLFSYAHVDTPRGDLNMD |
| Phytopythium sindhum | (none) | -------------ALAYAHVDTPRGDLNMD |
| Phytopythium vexans | (none) | KNYQGNDCSERTCLFAYAHVDTPRGDLNMD |
| Plasmopara halstedii | (none) | ---------------WYAHADTPKGDINMD |
| Pythium acanthophoron | (none) | KNYQGNDCADRTCLFGYAHVDTPKGDINMD |
| Pythium anandrum | (none) | KNYQGNDCADRTCVFSRAHVDTPRGDLNMD |
| Pythium angustatum | (none) | KNY?GND?ADRTCLFGRAHVDTPKGDIDMD |
| Pythium aphanidermatum | (none) | KNYQGNDCGDRTCLFGRAHVDTPKGDINMD |
| Pythium aristosporum | (none) | KNYQGNDCGDRTCLFGRAHVDTPKGDINMD |
| Pythium arrhenomanes | (none) | KNYQGNDCGDRTCLFGRAHVDTPKGDINMD |
| Pythium coloratum | (none) | ----------RTCAFGRAHVDTPKGDINMD |
| Pythium cryptoirregulare | (none) | -------------PFGYAHVDTPKGDIDMD |
| Pythium cylindrosporum | (none) | KNYQG?DCADRTCPFDYAHVDTPKGDIDMD |
| Pythium cystogenes | (none) | ---------DRTCLFGYAHVDTPQGDINMD |
| Pythium dimorphum | (none) | KNYQGNDCADRTC?FGRAHVDTP?GDLNMD |
| Pythium grandisporangium | (none) | KGFEGNDCADRTCSFGFAFVDTPKGDIDMD |
| Pythium hydnosporum | (none) | -NYEGNDCADRTCPFGRSFVDTPRGDLNMD |
| Pythium hypogynum | (none) | KNYQGNDCADRTCPFGYAHIDTPKGDINMD |
| Pythium insidiosum | (none) | -----NDCSDRTCLFARAFVDTPKGDINMD |
| Pythium intermedium | (none) | KNYQGNDCADHTCPFGYAHVDTPKGDIDMD |
| Pythium irregulare | (none) | -------------PFDYAHVDTPKGDIDMD |
| Pythium iwayamai | (none) | KNYQGNDCADRMCPFDYAHVDTPKGDINMD |
| Pythium kunmingense | (none) | KNYQGNDCADRTCPFGYAHVDTPKGDIDMD |
| Pythium lutarium | (none) | KNYQGNDCGDRTCAF?RAHVDTPKGDIDMD |
| Pythium mamillatum | (none) | KNYQGNDCADRTCPFDYAHVDTPKGDIDMD |
| Pythium multisporum | (none) | -NYQGNDCADRTCQFGYAHVDTPKGDIDMN |
| Pythium myriotylum | (none) | KNYQGNDCADRTCLFGRAHIDTPKGDINMD |
| Pythium nagaii | (none) | KNYQGNDCADRTCPFGYAHVDTPKGDINMD |
| Pythium nodosum | (none) | KNYQGNDCADRTCLFGYAHVDTPKGDINMD |
| Pythium nunn | (none) | -----NDCADRTCLFGYAHADTPKGDINMD |
| Pythium okanoganense | (none) | KNYQGNDCADRTCPFGYAHVDTPKGDIDMD |
| Pythium oligandrum | (none) | ---EGNDCADRTCPFGRSFVDTPRGDLNMD |
| Pythium orthogonon | (none) | ------------CLFGYAHADTPKGDINMD |
| Pythium paddicum | (none) | KNYQGNDCADRTCPFGYAHVDTPRGDINMD |
| Pythium periplocum | (none) | KNYEGNDCADRTCPFGRSFVDTPRGDLNMD |
| Pythium phragmitis | (none) | KNYQGNDCADRTCLFGRAHVDTPKGDINMD |
| Pythium pleroticum | (none) | KNYQGNDCADRTCQF?YAHADTPKGDINMD |
| Pythium porphyrae | (none) | --------------------WIPQGDIDMD |
| Pythium prolatum | (none) | KNYQGNDCADRMCVFSRAHVDTPRGDLN?D |
| Pythium pyrilobum | (none) | KNYQGNDCADRTCLFGSAHVDTPKGDINMD |
| Pythium rhizosaccharum | (none) | KNYQGNDCADRTCQFGYAHVDTPKGDINMD |
| Pythium segnitium | (none) | KNYQGNDCADRTCQFGYAHVDTPKGDINMD |
| Pythium splendens | (none) | KNYQGNDCADHTCVFGYTHVGTPKGDTNMD |
| Pythium sukuiense | (none) | KNYQGNDCADRICAFGRAHVDTPKGDINMD |
| Pythium sulcatum | (none) | ---QGNDCADRTCLFGRAHVDTPKGDVNMD |
| Pythium ultimum | (none) | KNYQGNDCADRTCVFGYAHVDTPKGDINMD |
| Pythium ultimum var sporangiiferum | (none) | KNYQGNDCADRTCVFGYAHVDTPKGDINMD |
| Pythium undulatum | (none) | KNYQGNDCADRTC?F?R????T???D?NMD |
| Pythium violae | (none) | KNYQGNDCADRTCLFGYAHVDTPKGDVNMD |
| Pythium volutum | (none) | KNYQGNDCADRTCLFGRAHVDTPKGDINMD |
| Saprolegnia eccentrica | (none) | ------------------------------ |
| Saprolegnia ferax | (none) | ------------------------------ |
| Saprolegnia parasitica | (none) | KNFMGNDCALRICPFGFAHVDTPKGDINMD |
Columns
None of the columns has a description.
