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Citation
Taxa
Matrices
Trees
Analyses
Matrix 42661 of Study 15325
Citation title: "Diaporthe species from California vineyards".
Study name: "Diaporthe species from California vineyards".
This study is part of submission 15325
(Status: Published).
Matrices
Title: Diaporthe species from California vineyards TEF1-alpha
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Cytospora austromontana 1_WillowW21 | (none) | GTCAAAACACACACA----TCTTTCCGATA |
| Diaporthe alleghaniensis CBS_495_72 | (none) | GTTAGTAAATACCA------CAGTCACGGA |
| Diaporthe ambigua CBS_114015 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua SBen915 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua SBen919 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua SBen922 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua Wint925 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe australafricana CBS_111886 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Napa92 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana SBen926 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana STE_U_2655 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint910 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint911 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint912 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint913 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint915 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint918 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint922 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Wint923 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe beckhausii 138_27 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATT |
| Diaporthe cf nobilis CBS_116954 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe cf nobilis RG_2013_CBS_116953 | (none) | GTTAGTAAATATCA------CAGCCACGGA |
| Diaporthe chamaeropis CBS_454_81 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe cuppatea CBS_117499 | (none) | GTCAGTAAACATCACACATCCCACAGCATG |
| Diaporthe cynaroidis CBS_122676 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe eres CBS_109497 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa902 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa906 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa908 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa909 | (none) | GTTAGGAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa914 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa917 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa918 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa919 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa920 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Napa923 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe eres Pho15 | (none) | GTTAGTAAACATCA------CAGTCACGGA |
| Diaporthe foeniculacea CBS_187_27 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe infecunda CBS_133812 | (none) | GTCAGTAAATATCACACATGCCGCATCATG |
| Diaporthe lusitanicae CBS_123213 | (none) | GTCAGTAAACATCACGCATCCCACAGCATG |
| Diaporthe foeniculacea CBS_123208 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea Napa910 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea Napa912 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea Napa913 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea Napa916 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen901 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen903 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen905 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen907 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen911 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen917 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen918 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe foeniculacea SBen925 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe chamaeropis Wint901 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint903 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint905 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint909 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint914 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint917 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint919 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint920 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wint921 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe chamaeropis Wolf915 | (none) | GTTAGTAAACACCA------CAATCCCAGA |
| Diaporthe novem CBS_127270 | (none) | GTCAGTAAATATCGCACATCCCACAGCATG |
| Diaporthe perjuncta CBS_109745 | (none) | GTTAGTAAACATCG------CCATCACAGC |
| Diaporthe ambigua SBen902 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua SBen904 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua SBen906 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua SBen908 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua Wint904 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua Wint906 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua Wint907 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe ambigua Wint916 | (none) | GTCAGTAAACATCGAATG-CCTACGGCATA |
| Diaporthe novem Wint924 | (none) | GTCAGTAAATATCGCACATCCCACAGCATG |
| Diaporthe vaccinii CBS_160_32 | (none) | GTTAGTAAATACCA------CAATCACGGA |
| Diaporthe viticola CBS_113201 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe ampelina Wolf_902 | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Diaporthe ampelina Wolf_906 | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Diaporthe australafricana Napa904 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana Napa905 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe fukushii Napa911 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe ampelina Napa915 | (none) | GTTAGTAAACATCA------CAATAACAGC |
| Diaporthe cf nobilis Napa922 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe ampelina Pho06 | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Diaporthe ampelina Pho24 | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Phomopsis fukushii Pho01 | (none) | GTTAGTAAATATCA------CAGTCACGGA |
| Diaporthe novem Wint902 | (none) | GTCAGTAAATATCGCACATCCCACAGCATG |
| Diaporthe novem Wint908 | (none) | GTCAGTAAATATCGCACATCCCACAGCATG |
| Diaporthe ampelina CBS_114016 | (none) | GTTAGTAAACATCA------CAATAACAGC |
| Diaporthe novem Merc901 | (none) | GTCAGTAAATATCGCACATCCCACAGCATG |
| Diaporthe novem Merc902 | (none) | GTCAGTAAATATCGCACATCCCACAGCATG |
| Diaporthe australafrican Merc903 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana SBen910 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe sp SBen914 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe sp SBen916 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe sp SBen921 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe australafricana SBen927 | (none) | GTTAGTAAATATCAGAGCTACATTGCAATC |
| Diaporthe foeniculacea SBen928 | (none) | GTTAGTAAACACCA------CAATCCCAGC |
| Diaporthe ampelina UCD2408Tx | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Diaporthe ampelina Wolf907 | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Diaporthe ampelina Wolf911 | (none) | GTTAGTAAACATCA------CAATCACAGC |
| Diaporthe ampelina Wolf912 | (none) | GTTAGTAAACATCA------CAATCACAGC |
Columns
None of the columns has a description.
