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Taxa
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Analyses
Matrix 21786 of Study 15669
Citation title: "Gene transfers shaped the evolution of de novo NAD+ biosynthesis in eukaryotes".
Study name: "Gene transfers shaped the evolution of de novo NAD+ biosynthesis in eukaryotes".
This study is part of submission 15669
(Status: Published).
Matrices
Title: Nicotinate-Nucleotide Adenylyltransferase Alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Homo sapiens 18652051 | (none) | MEN--------------------------- |
| Mus musculus 57527870 | (none) | MDS--------------------------- |
| Danio rerio 528518142 | (none) | MAS--------------------------- |
| Nematostella vectensis 156405737 | (none) | MAA--------------------------- |
| Ciona intestinalis 459173389 | (none) | ------------------------------ |
| Strongylocentrotus purpuratus 390336005 | (none) | MPG--------------------------- |
| Oikopleura dioica 313242099 | (none) | MVT--------------------------- |
| Aplysia californica 524866320 | (none) | ------------------------------ |
| Lepeophtheirus salmonis 225712656 | (none) | MSR--------------------------- |
| Daphnia pulex 321453246 | (none) | MNK--------------------------- |
| Caligus rogercresseyi 225709256 | (none) | MSK--------------------------- |
| Branchiostoma floridae 260830087 | (none) | MAA--------------------------- |
| Caenorhabditis elegans 71997862 | (none) | MGT--------------------------- |
| Brugia malayi 170589299 | (none) | MEK--------------------------- |
| Ascaris suum 541047205 | (none) | MDG--------------------------- |
| Capitella teleta 443691813 | (none) | MAL--------------------------- |
| Echinococcus granulosus 556515322 | (none) | MNE----ATADSESYSSYSSSTSTSPRDPA |
| Loa loa 312066533 | (none) | MEK--------------------------- |
| Lottia gigantea 556108217 | (none) | MSA--------------------------- |
| Drosophila melanogaster 19528069 | (none) | MSA--------------------------- |
| Acyrthosiphon pisum 328720850 | (none) | MFL--------------------------- |
| Trichoplax adhaerens 196009472 | (none) | MAS--------------------------- |
| Ajellomyces dermatitidis 261205294 | (none) | MVD--------------------------- |
| Aspergillus niger 145244667 | (none) | MTD--------------------------- |
| Aspergillus oryzae 169769204 | (none) | MTD--------------------------- |
| Aspergillus nidulans 67522577 | (none) | MTE--------------------------- |
| Ashbya gossypii 302309350 | (none) | MDP--------------------------- |
| Debaryomyces hansenii 294655955 | (none) | MDP--------------------------- |
| Coccidioides posadasii 303311669 | (none) | MTG--------------------------- |
| Saccharomyces cerevisiae 6323360 | (none) | MDP--------------------------- |
| Schizosaccharomyces pombe 429241520 | (none) | MHT--------------------------- |
| Scheffersomyces stipitis 150951341 | (none) | MDP--------------------------- |
| Meyerozyma guilliermondii 146423687 | (none) | MDP--------------------------- |
| Neosartorya fischeri 119470062 | (none) | MTD--------------------------- |
| Penicillium chrysogenum 255932279 | (none) | MAI--------------------------- |
| Cryptococcus neoformans 405121504 | (none) | MAS----SEPSLFLTAASHTSTAEESRDPM |
| Ustilago maydis 71024819 | (none) | MPR----GGDEAGKHSDPHRSNDSNGHLES |
| Mortierella verticillata MVEG 05231 | (none) | MPP--------------------------- |
| Allomyces macrogynus AMAG 17335 | (none) | MSQ--------------------------- |
| Spizellomyces punctatus SPPG 01224 | (none) | MSS--------------------------- |
| Neurospora crassa 85086139 | (none) | MSS--------------------------- |
| Monosiga brevicollis 167526969 | (none) | MAG--------------------------- |
| Salpingoeca sp 326431706 | (none) | MFA--------------------------- |
| Entamoeba dispar 167380300 | (none) | MEE--------------------------- |
| Entamoeba histolytica 67472722 | (none) | MEE--------------------------- |
| Entamoeba invadens 471208618 | (none) | MQS--------------------------- |
| Dictyostelium fasciculatum 328874203 | (none) | MTQ--------------------------- |
| Dictyostelium purpureum 330845458 | (none) | ------------------------------ |
| Dictyostelium discoideum 66805693 | (none) | ------------------------------ |
| Polysphondylium pallidum 281208603 | (none) | MEK--------------------------- |
| Arabidopsis thaliana 42568561 | (none) | MDV--------------------------- |
| Glycine max 571506330 | (none) | MCS--------------------------- |
| Vitis vinifera 296089926 | (none) | MDI--------------------------- |
| Ricinus communis 255563474 | (none) | MDV--------------------------- |
| Populus trichocarpa 224123176 | (none) | MDP--------------------------- |
| Sorghum bicolor 242066962 | (none) | MEE--------------------------- |
| Physcomitrella patens 168067837 | (none) | MNA--------------------------- |
| Physcomitrella patens 168052241 | (none) | MSS--------------------------- |
| Physcomitrella patens 168052243 | (none) | MPL--------------------------- |
| Selaginella moellendorffii 302756067 | (none) | ------------------------------ |
| Volvox carteri 302828098 | (none) | MFG--------------------------- |
| Chlorella variabilis 307104732 | (none) | ------------------------------ |
| Chlamydomonas reinhardtii 159469087 | (none) | LNP--------------------------- |
| Coccomyxa subellipsoidea 545358533 | (none) | MFP--------------------------- |
| Cyanidioschyzon merolae 544210593 | (none) | MWV--------------------------- |
| Galdieria sulphuraria 545709277 | (none) | MYG--------------------------- |
| Porphyridium purpureum contig 3419.3 | (none) | M----------------------------- |
| Ectocarpus siliculosus 298705733 | (none) | MMSSQDV----------------------- |
| Schizochytrium aggregatum Schag1 83217 | (none) | MAR--------------------------- |
| Aplanochytrium kerguelense Aplke1 105217 | (none) | MST--------------------------- |
| Aurantiochytrium limacinum Aurli1 32548 | (none) | MSV--------------------------- |
| Saprolegnia diclina 530740957 | (none) | MR---------------------------- |
| Albugo laibachii 325192212 | (none) | MR---------------------------- |
| Phytophthora infestans 301120488 | (none) | MTR--------------------------- |
| Phytophthora ramorum JGI 2507661889 | (none) | MTPLVDI----------------------- |
| Phytophthora sojae 348676426 | (none) | LLKLLEI----------------------- |
| Perkinsus marinus 294890669 | (none) | MPN--------------------------- |
| Plasmodium berghei 68063625 | (none) | MIY--------------------------- |
| Plasmodium knowlesi 193810136 | (none) | MFN--------------------------- |
| Plasmodium falciparum 124513330 | (none) | MH---------------------------- |
| Plasmodium vivax 156099184 | (none) | MKV--------------------------- |
| Plasmodium cynomolgi 457873656 | (none) | MN---------------------------- |
| Plasmodium yoelii 82752821 | (none) | MLY--------------------------- |
| Tetrahymena thermophila 146165677 | (none) | MEK--------------------------- |
| Theileria annulata 65303484 | (none) | MSA--------------------------- |
| Theileria parva 71026135 | (none) | MNA--------------------------- |
| Babesia bovis 156087951 | (none) | MEE--------------------------- |
| Giardia lamblia 159108475 | (none) | MPC--------------------------- |
| Giardia intestinalis 253742205 | (none) | MT---------------------------- |
| Spironucleus salmonicida 558601652 | (none) | M----------------------------- |
| Leishmania infantum 146083652 | (none) | MPP--------------------------- |
| Leishmania major 157867676 | (none) | MPP--------------------------- |
| Trypanosoma cruzi 407838812 | (none) | MSD--------------------------- |
| Trypanosoma congolense 342181069 | (none) | MTY--------------------------- |
| Trypanosoma brucei 72389282 | (none) | MLL--------------------------- |
| Leishmania braziliensis 154335346 | (none) | MLS--------------------------- |
| Trichomonas vaginalis 154423037 | (none) | MTS--------------------------- |
| Buchnera aphidicola 15617045 | (none) | MK---------------------------- |
| Cand Riesia pediculicola 295698311 | (none) | MIR--------------------------- |
| Lamprocystis purpurea 521993334 | (none) | M----------------------------- |
| Xanthomonas oryzae 188577783 | (none) | M----------------------------- |
| Legionella drancourtii 493928026 | (none) | MH---------------------------- |
| Pseudoalteromonas sp 494620031 | (none) | M----------------------------- |
| Bermanella marisrubri 494076806 | (none) | MS---------------------------- |
| Halomonas elongata 307544784 | (none) | MAR--------------------------- |
| Oxalobacteraceae bacterium 522193879 | (none) | MV---------------------------- |
| Cycloclasticus pugetii 519006632 | (none) | MA---------------------------- |
| Cand Vesicomyosocius okutanii 148244464 | (none) | MQK--------------------------- |
| Hippea alviniae 550921245 | (none) | M----------------------------- |
| Gayadomonas joobiniege 516014004 | (none) | MSK--------------------------- |
| Veillonella parvula 490831099 | (none) | MVD--------------------------- |
| Alteromonas macleodii 407699945 | (none) | MSL--------------------------- |
| uncultured bacterium 406979593 | (none) | MQI--------------------------- |
| Clostridium tetani 28211675 | (none) | MK---------------------------- |
| Desmospora sp 497395288 | (none) | MKK--------------------------- |
| Aminicenantes bacterium 551142562 | (none) | MKT--------------------------- |
| Psychromonas ingrahamii 119944941 | (none) | MDI--------------------------- |
| Spiribacter sp 554595317 | (none) | ------------------------------ |
| Methylotenera mobilis 518740026 | (none) | M----------------------------- |
| Gilvimarinus chinensis 519052214 | (none) | MR---------------------------- |
| Psychromonas sp 470478781 | (none) | MPL--------------------------- |
| Methylomicrobium alcaliphilum 357405202 | (none) | ------------------------------ |
| Halomonas lutea 517847798 | (none) | MGM--------------------------- |
| Marinobacterium rhizophilum 522174335 | (none) | MSS--------------------------- |
| Methylotenera sp 519028046 | (none) | M----------------------------- |
| Rhodanobacter sp 495486361 | (none) | M----------------------------- |
| uncultured bacterium 406999011 | (none) | MP---------------------------- |
| Xenorhabdus bovienii 290476194 | (none) | MLH--------------------------- |
| Halomonas zhanjiangensis 517747105 | (none) | MSS--------------------------- |
| Escherichia coli 487633144 | (none) | MK---------------------------- |
| Hahella ganghwensis 521078440 | (none) | MP---------------------------- |
| Firmicutes bacterium 547821648 | (none) | M----------------------------- |
| Cand Kuenenia stuttgartiensis 91202924 | (none) | MM---------------------------- |
| Pedobacter arcticus 515829424 | (none) | MRH--------------------------- |
Columns
None of the columns has a description.
