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Matrix 1224 of Study 1574
Citation title: "Unraveling the evolutionary history of the liverworts (Marchantiophyta): multiple taxa, genomes and analyses".
This study was previously identified under the legacy study ID S1519
(Status: Published).
Matrices
Title: 5 DNA loci
Description: Legacy TreeBASE Matrix ID = M2725
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Acrolejeunea fertilis | (none) | ------------------------------ |
| Acromastigum exile | (none) | ---GGATTTCCCTAGTAGCGGCGAGCGAAC |
| Adelanthus lindenbergianus | (none) | ----GATTTCCCTAGTAGCGGCGAGCGAAC |
| Allisonia cockaynii | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Anastrophyllum michauxii | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Andreaea rothii | (none) | --AGGATT-CCCTAGTAACGGCGAGCGAAC |
| Andreaeobryum macrosporum | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Aneura pinguis Russia | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Aneura pinguis WN | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Anthelia julacea | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Anthoceros angustus | (none) | ------------------------------ |
| Anthoceros punctatus | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Apometzgeria frontipilis | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Apometzgeria pubescens | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Apotreubia nana | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Ascidiota blepharophylla | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Asterella africana | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Asterella grollei | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Asterella wallichiana | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Athalamia hyalina | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Athalamia pingius | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Austrofossombronia australis | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Austrofossombronia peruviana | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Balantiopsis diplophylla | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Bazzania affinis | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Blasia pusilla DUKE | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Blasia pusilla NC | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Jungermannia subelliptica | (none) | ------------------------------ |
| Bryopteris filicina | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Calycularia crispula | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Calypogeia muelleriana | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Cavicularia densa | (none) | ------------------------------ |
| Cephalozia catenulata | (none) | ------------------------------ |
| Cephaloziella hirta | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Ceratolejeunea coarina | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Chara connivens | (none) | ------------------------------ |
| Cheilolejeunea trifaria | (none) | ------------------------------ |
| Lophocolea appalachianus | (none) | --AGGATTTCCTTAGTAGCGGCGAGCGAAC |
| Chiloscyphys polyanthos | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Chlamydomonas reinhardtii | (none) | --AGGATTCCCCTAGTAACGGCGAGCGAAC |
| Chlorella vulgaris | (none) | ------------------------------ |
| Conocephalum conicum | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Conocephalum salebrosum | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Conocephalum japonicum | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Corsinia coriandrina | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Cryptomitrium himalayense | (none) | --------CCCTTAGTAGCGGCGAGCGAAC |
| Cryptothallus mirabilis | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Cyathodium tuberosum | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Cyclolejeunea convexistipa | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Dendrohypopterygium arbuscula | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Diplophyllum albicans | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Diplophyllum obtusifolium | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Drepanolejeunea biocellata | (none) | ------------------------------ |
| Dumortiera hirsuta Mexico | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Dumortiera hirsuta USA | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Equisetum telmateia | (none) | ------------------------------ |
| Exormotheca pustulosa | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Fossombronia angulosa | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Fossombronia foveolata | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Fossombronia pusilla | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Fossombronia sp. ined. | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Frullania albertii | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Frullania eboracensis | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Frullania moniliata | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Gackstroemia weindorferi | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Goebeliella cornigera | (none) | ------------------------------ |
| Greeneothallus gemmiparus | (none) | --AGGATTCCCCTAGTAACGGCGAGCGAAC |
| Gymnomitrion concinnatum | (none) | ------------------------GCGAAC |
| Gyrothyra underwoodiana | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Haplomitrium andinum | (none) | --AAGATTTCCCTAGTAGCGGCGAGCGAAC |
| Haplomitrium blumei | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAG |
| Haplomitrium gibbsiae DUKE | (none) | ------------------------------ |
| Haplomitrium gibbsiae Mt Arthur | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Haplomitrium hookeri Scotland | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Haplomitrium hookeri USA | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Haplomitrium mnioides | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAG |
| Harpanthus scutatus | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Hattorianthus erimonus | (none) | --AGGATT{GT}CCCTAGTAGCGGCGAGCG |
| Herbertus oldfieldianus | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Herbertus sakurai | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Herbertus subdentatus | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Herzogobryum teres | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Hookeria lucens | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Hymenophyton flabellatum | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Hymenophyton leptopodum | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Isotachis lyallii | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Isotachis multiceps | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Cephaloziella varians | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Jensenia connivens | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Jensenia spinosa | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Jubula hutchinsiae | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Jubula pennsylvanica | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Jubulopsis novaezelandiae | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Jungermannia exsertifolia | (none) | --AGGATTTC??TAG---CG????GCGAAC |
| Jungermannia crenuliformis | (none) | --TGGCTTTCCCTAGTAGCGGCGAGCGAAC |
| Jungermannia leiantha | (none) | ------------------------------ |
| Leiocolea heterocolpos | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Leiosporoceros dussii | (none) | ------------------------------ |
| Lejeunea cladogyna | (none) | ------------------------------ |
| Lepicolea attenuata | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Lepicolea ochroleuca | (none) | ------------------------------ |
| Lepicolea rara | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Lepidolaena clavigera | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Lepidozia reptans | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Lethocolea glossophylla | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Lobatiriccardia lobata | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Lophocolea heterophylla | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Nardia insecta | (none) | -------------------------CGAAC |
| Lunularia cruciata Mexico | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Lunularia cruciata Scotland | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Makinoa crispata | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Mannia androgyna | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Mannia fragrans | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Marchantia chenopoda | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Marchantia inflexa | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Marchantia paleacea | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Marchantia polymorpha | (none) | ---GGATTCCCCTAGTAGCGGCGAGCGAAC |
| Marsupella emarginata | (none) | ------------------------------ |
| Marsupidium latifolium | (none) | ---GGATTTCCCTAGTAGCGGCGAGCGAAC |
| Mastigolejeunea auriculata | (none) | ------------------------------ |
| Mastigophora diclados | (none) | ------------------------------ |
| Megaceros flagellaris | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Metzgeria conjugata | (none) | ---------CCTTAGTAACGGCGAGCGAAC |
| Metzgeria furcata | (none) | --AGGATT{GT}CCTTAGTAACGGCGAG{C |
| Metzgeria fruticola | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Metzgeria liebmanniana | (none) | --AGGATT{GT}CCTTAGTAACGGCGAG{C |
| Mnium hornum | (none) | ---------------TAACGGCGAGCGAAC |
| Moerckia blyttii | (none) | ------------------------------ |
| Moerckia flotoviana | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Monoclea gottschei elongata | (none) | -----ATCCCTCTA{GT}{AG}---GGCGA |
| Monoclea gottschei Long et al. | (none) | --AGGATTCCCTCAGTAGCGGCGAGCGAAC |
| Monoclea gottschei Shaw | (none) | --AGGATTCCCTCAGTAGCGGCGAGCGAAC |
| Monoselenium tenerum | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Myriocolea irrorata | (none) | ------------------------------ |
| Nardia scalaris | (none) | ---GGATTTC??TAG---CG????GCGAAC |
| Neohodgsonia mirabilis | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Neohodgsonia mirabilis DL | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Neotrichocolea bisset | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Nephroselmis olivacea | (none) | ------------------------------ |
| Noteroclada confluens Argentina | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Noteroclada confluens Venezuela | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Nowellia curvifolia | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Odontolejeunea lunulata | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Odontoschisma denudatum | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Pallavicinia lyellii ARK | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Pallavicinia rubristipa | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Pallavicinia xiphoides | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Pellia appalachiana | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Pellia endiviifolia | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Pellia epiphylla DUKE | (none) | --AGGTTTTCCCTAGTAACGGCGAGCGAAC |
| Pellia epiphylla NC | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Peltolepis quadrata | (none) | ------------------------------ |
| Petalophyllum ralfsii | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Phymatoceros bulbiculosus | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Phyllothallia nivicola | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Plagiochasma rupestre | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Plagiochasma wrightii | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Plagiochila austinii | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Pleurozia purpurea Bhutan | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Pleurozia purpurea USA | (none) | ------------------------------ |
| Podomitrium malaccense | (none) | ------------------------------ |
| Podomitrium phyllanthus | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Polytrichum pallidisetum | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Porella navicularis | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Porella pinnata | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Preissia quadrata USA | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Preissia quadrata Scotland | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Psilotum nudum | (none) | ------------------------------ |
| Ptilidium ciliare | (none) | --?GGATTTCCCTAGTAACGGCGAGCGAAC |
| Radula complanata | (none) | ------------------------------ |
| Radula perrottetii | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Reboulia hemisphaerica | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Riccardia capillacea | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Riccardia multifida | (none) | ------------------------------ |
| Riccardia fucoides | (none) | --AGGATTTCCTTAGTAACGGCGAGCGAAC |
| Riccia fluitans IOWA | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Riccia huebeneriana | (none) | ------------------------------ |
| Riccia ciliifera | (none) | --AGGATTCCCTTAGTAGCGGCGAGCGAAC |
| Ricciocarpos natans Australia | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Riella helicophylla | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Sauteria alpina | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Scapania nemorea IL | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Scapania nemorosa DUKE | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Schiffneria hyalina | (none) | ------------------------------ |
| Schistochila appendiculata | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Schistochila lehmanniana | (none) | ------------------------------ |
| Sphaerocarpos texanus DUKE | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Sphaerocarpos texanus IL | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Sphagnum cuspidatum | (none) | --AGGATTCCCCTAGTAACGGCGAGCGAAC |
| Sphagnum palustre | (none) | --AGGATTCCCCTAGTAACGGCGAGCGAAC |
| Stenorrhipis madagascariensis | (none) | ------------------------------ |
| Symphyogyna aspera | (none) | ---GGATTCCCCTAGTAACGGCGAGCGAAC |
| Symphyogyna brongniartii | (none) | ---GGATTCCCCTAGTA-CGGCGAGCGAAC |
| Symphyogyna hymenophyllum | (none) | --AGGATTCCCCTAGTAACGGCGAGCGAAC |
| Symphyogyna undulata | (none) | --AGGATTCCCCTAGTAACGGCGAGCGAAC |
| Takakia lepidozioides | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Takakia ceratophylla | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Targionia hypophylla CA | (none) | ------------------------------ |
| Targionia hypophylla Portugal | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Telaranea pulcherrima | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Temnoma pulchellum | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Tetralophozia setiformis | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Treubia lacunosa | (none) | ----GATTTCCCTAGTAACGGCGAGCGAAC |
| Treubia pygmaea | (none) | --AGGATTTCCCTAGTAACGGCGAGCGAAC |
| Triandrophyllum subtrifidum | (none) | ----GATTTCCCTAGTAGCGGCGAGCGAAC |
| Trichocolea tomentosa | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Tritomaria quinquedentata | (none) | --AGGATTTCCCTAGTAGCGGCGAGCGAAC |
| Verdoornia succulenta | (none) | ------------------------------ |
| Weisnerella denudata | (none) | --AGGATTCCCCTAGTAGCGGCGAGCGAAC |
| Xenothallus vulcanicolus | (none) | --{AT}?GATTCCCCTAGTAACGGCGAGCG |
Columns
None of the columns has a description.
