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Matrix 23497 of Study 16190
Citation title: "Nodal signalling determines biradial asymmetry in Hydra".
Study name: "Nodal signalling determines biradial asymmetry in Hydra".
This study is part of submission 16190
(Status: Published).
Matrices
Title: Tgf-beta gene superfamily alignment
Description: Fig E2
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Acropora digitifera Bmp2/4 | (none) | VNYCQRHPLYVDF-SEVGWND--WIVAP-P |
| Acropora digitifera Gdf5-like | (none) | KDSCRRKPMHVDF-KQLGWSN--WVIAP-R |
| Acropora digitifera Activin 2 | (none) | QQECCRRMLYVNF-KKIGW-D--WIIFP-E |
| Acropora digitifera Activin 1 | (none) | QQECCRRKLYVNF-TAQRW-D--WIIHP-S |
| Acropora digitifera Tgf3 | (none) | HKECRRRWVYVQF-KKLRWN---WIIAP-S |
| Acropora digitifera Nodal-related A | (none) | PSPCSRKDMMITS-SDFGKRDGLTLLHP-R |
| Acropora digitifera Tgf2 | (none) | VDRCSRRKLFVKF-RDLKFDK--WIIAP-R |
| Acropora digitifera Tgf4 | (none) | AGKCGVRNLTIYF-KDLGWDK--WFIAP-K |
| Acropora millepora Bmp2/4 | (none) | VNYCQRHPLYVDF-SEVGWND--WIVAP-P |
| Acropora millepora Gdf5-like | (none) | KDSCRRKPMHVDF-KQLGWSN--WVIAP-R |
| Acropora millepora Tgf5 | (none) | DSQCRLQTFVSNF-SMIGMGY--MIISPRN |
| Acropora millepora Nodal-related A | (none) | PSPCSRKDMMITS-SDFGKRDGLTLLHP-R |
| Acropora millepora Activin 2 | (none) | QQECCRRMLYVNF-KKIGW-D--WIIFP-E |
| Acropora millepora Activin 1 | (none) | QQECCRRKLYVNF-TAQSW-H--WIIHP-S |
| Acropora millepora Nodal-related B | (none) | GP-CSRRPMTVHF-RAHLNMK--QVIFP-R |
| Acropora millepora Tgf2 | (none) | VDRCSRRKLFVKF-RDLRFDK--WIIAP-R |
| Acropora millepora Tgf4 | (none) | AGKCGVRNLTIYF-KDLGWDK--WFIAP-K |
| Acropora millepora Tgf3 | (none) | HKECRRRWVYVQF-KKLRWN---WIIAP-S |
| Acropora millepora Tgf1 | (none) | LDICRKRRHAVRF-RDLKWNG--WIIAP-T |
| Branchiostoma floridae Activin | (none) | SNECCREKFYVDF-KDIAWDD--WIISP-K |
| Branchiostoma floridae Admp | (none) | FEPCTRRNLYVDF-DAIGWSG--WIISP-K |
| Branchiostoma floridae Bmp2/4 | (none) | KANCRRHSLYVDF-SDVGWND--WIVAP-P |
| Branchiostoma floridae Tgf1 | (none) | CKSCKRHSLYVDF-TELGWG---WIIAP-A |
| Branchiostoma floridae Bmp3 | (none) | --------MRVDF-ADIGWSD--WIISP-K |
| Branchiostoma floridae Bmp5-8 | (none) | PHVCQRRSLYVSF-RDLGWQD--WIIAP-D |
| Branchiostoma floridae Nodal-related | (none) | VEECRRHDYHVVF-DDIILPE--FILQP-P |
| Branchiostoma floridae Gdf5-7 | (none) | ---CMRRSLQVSF-HDLGWDD--WIIAP-T |
| Branchiostoma floridae Gdf8/Tgfb-like | (none) | PRSCCRRSLVVSF-KDIGWDG--WVMEP-A |
| Branchiostoma floridae Lefty | (none) | SNRCCRSENYIDF-SDLPFAEQ-FILEP-R |
| Branchiostoma floridae Myostatin | (none) | EERCCRYPLQVDF-REFGW-D--WIIAP-N |
| Branchiostoma floridae Nodal | (none) | TP-CKKVEFWVDF-DHIGWGT--WIIYP-K |
| Branchiostoma floridae Univin | (none) | GNICKRRKLYIRF-KDVGWDD--WIIAP-Q |
| Biomphalaria glabrata Nodal | (none) | KVNCQLHNFEVDF-NTIGWGQ--WIIHP-K |
| Cladonema pacificum Gdf8/Tgfb-like | (none) | SSDCCLDNFYVSF-KAIGD----WIRNP-V |
| Cladonema pacificum Bmp5-8 | (none) | NASCGRRPLYIGF-KDLGWND--WILAP-A |
| Cladonema pacificum Bmp2/4 | (none) | KEKCRLRNFFLDF-KDVAWDE--WIIAP-T |
| Cladonema pacificum Nodal-related | (none) | KKMCRRKNMVVDF-QELGWGN--WLLSP-T |
| Drosophila melanogaster Dpp | (none) | DDTCRRHSLYVDF-SDVGWDD--WIVAP-L |
| Drosophila melanogaster Myoglianin | (none) | DMRCCRYPLKVNF-TSFGWH---FVVAP-T |
| Danio rerio InhibinbA | (none) | ARVCCKRQFYVNF-KDIGWND--WIIAP-S |
| Danio rerio Admp | (none) | KMACQRQPLYVDF-EEIGWSG--WIVSP-K |
| Danio rerio Bmp10 | (none) | GNQCKKSSLYVDF-KDIGWDS--WILAP-T |
| Danio rerio Bmp2a | (none) | KANCRRHSLYVDF-SDVGWND--WIVAP-P |
| Danio rerio Bmp3 | (none) | PRNCARRYLKVDF-ADIGWSE--WIISP-K |
| Danio rerio Bmp4 | (none) | NRNCRRHALYVDF-SDVGWND--WIVAP-P |
| Danio rerio Bmp5 | (none) | RQACKKHELYVSF-RDLGWQD--WIIAP-E |
| Danio rerio Bmp6 | (none) | KTACRKHDLYVSF-RELSWQD--WIIAP-E |
| Danio rerio Bmp7 | (none) | KQACKKHELYVSF-RDLGWQD--WIIAP-E |
| Danio rerio Gdf11 | (none) | ESRCCRYPLTVDF-EAFGW-D--WIIAP-K |
| Danio rerio Gdf5 | (none) | KQRCNRKQLHVNF-KEMGWDD--WIIAP-L |
| Danio rerio Gdf6A | (none) | KSRCSKKALHVNF-KELGWDD--WIIAP-L |
| Danio rerio Gdf7 | (none) | RTRCSRKPLHVNF-KELGWDD--WIIAP-L |
| Danio rerio Gdf8 | (none) | ESRCCRYPLTVDF-EDFGW-D--WIIAP-K |
| Danio rerio Lefty1 | (none) | REMCCREQYFINF-RALTWTQY-WIIEP-S |
| Danio rerio Nodal-related | (none) | KPLCKKVDMWVDF-DQIGWSD--WIVYP-K |
| Danio rerio Tgfb2 | (none) | QDNRCLRSLYIDFKKDLGWR---WIHEP-K |
| Danio rerio Tgfb3 | (none) | EENCCVRKLYIDFRQDLGWR---WIHEP-K |
| Danio rerio Vgr1 | (none) | SNVCKPRRLYIDF-KDVGWQD--WIIAP-Q |
| Gallus gallus Nodal | (none) | RSLCRRVDMMVDF-EQTGWGS--WIVYP-K |
| Hydra magnipapillata Activin-like 1 | (none) | SEECCRSSITINF-KDLGWES--WILAP-K |
| Hydra magnipapillata Activin-like 2 | (none) | DASCCSRPVYVSF-EDLSWN---WVLSP-K |
| Hydra magnipapillata Activin-like 3 | (none) | DASCCSRPFYVSF-QDLKWN---WVLSP-K |
| Hydra magnipapillata Tgf4 | (none) | AKVCGVEPLNVPL-ELIDWQK--LFIYP-T |
| Hydra magnipapillata Tgf3 | (none) | SKLCGVEPLVVPL-ELIDWHN--LFIMP-K |
| Hydra magnipapillata Bmp2/4 | (none) | QDLCHLHPFEFDL-VKVGWNE--FVLYP-S |
| Hydra magnipapillata Bmp5-8a | (none) | ISDCGKHLLYVSF-KDIGWSD--WIIAP-D |
| Hydra magnipapillata Bmp5-8b | (none) | GSRCDKHSLYIRF-KDIGWN---LIIAP-E |
| Hydra magnipapillata Bmp5-8c | (none) | GSRCDKHPLYIGF-KDLGWSD--WIIAP-D |
| Hydra magnipapillata Activin-like 4 | (none) | SVSCCSRPVYISF-EDINWR---WVLSP-K |
| Hydra magnipapillata Nodal-related | (none) | K-KCRRKSMKVNL-SELKWDK--WFMNP-I |
| Hydra magnipapillata Tgf1 | (none) | NVGCRKKNMFFKF-RDYSEFS--NVLIP-K |
| Hydra magnipapillata Tgf2 | (none) | KNICSVKQLFVPL-KKAGWNN--LFLYP-D |
| Lottia gigantea Tgf2 | (none) | TGQCCKLPSFVNF-SDLGLDD--RIVTP-N |
| Lottia gigantea Admp | (none) | KRSCTKQDMYVDF-DEIGWSG--WIISP-K |
| Lottia gigantea Bmp2/4 | (none) | KNECKRHALYVDF-GDVGWND--WIVAP-T |
| Lottia gigantea Bmp5-8 | (none) | NLPCKRHSLYVSF-RDLGWQD--WIIAP-D |
| Lottia gigantea Tgf1 | (none) | EISCCREPVLFNF-EEAGLG---WIIAP-T |
| Lottia gigantea Myostatin | (none) | EKRCCRHPLEVDF-VDFGWD---WVIAP-I |
| Lottia gigantea Tgf3 | (none) | ESRCCRNVVKIKA-QDIFP----QIIAP-D |
| Lottia gigantea Nodal | (none) | NSGCQLHDFEVDF-NSIGWGQ--WIIHP-K |
| Lymnaea stagnalis Nodal | (none) | KENCQLHNFEVDF-NTIGWGQ--WIIHP-K |
| Mnemiopsis leidyi Tgf1b | (none) | AFPRQKVKFDLNL-VDIGWDS--WMLIP-K |
| Mnemiopsis leidyi Tgf4 | (none) | GEKCKLEPLYINF-RDLGWES--WVIAP-P |
| Mnemiopsis leidyi Myostatin | (none) | QKKCCRYHYFVKF-ADLGMD---WILAP-D |
| Mnemiopsis leidyi TgfbA | (none) | PRQCCKKDHWITF-KEVGLDH--IILEP-Q |
| Mnemiopsis leidyi Tgf2 | (none) | QHRCTMMEFYVNF-TKLGWGS--KIIHP-Q |
| Mnemiopsis leidyi Nodal-related | (none) | SPHCRVRNLMVNF-NKIGLN---SVMAP-L |
| Mnemiopsis leidyi Tgf3 | (none) | EGKCGVRLLYLQF-EKDMSIP--SIRAP-Q |
| Mnemiopsis leidyi Tgf1a | (none) | NYHCRRQDLWINF-DEIGWD---FVITP-K |
| Mus musculus InhibinbA | (none) | VNICCKKQFFVSF-KDIGWND--WIIAP-S |
| Mus musculus InhibinbB | (none) | TSLCCRQQFFIDF-RLIGWND--WIIAP-T |
| Mus musculus Bmp10 | (none) | GNYCKKTPLYIDF-KEIGWDS--WIIAP-P |
| Mus musculus Bmp2 | (none) | KSSCKRHPLYVDF-SDVGWND--WIVAP-P |
| Mus musculus Bmp3 | (none) | PRNCARRYLKVDF-ADIGWSE--WIISP-K |
| Mus musculus Bmp4 | (none) | NKNCRRHSLYVDF-SDVGWND--WIVAP-P |
| Mus musculus Bmp5 | (none) | KQACKKHELYVSF-RDLGWQD--WIIAP-E |
| Mus musculus Bmp6 | (none) | KTACKKHELYVSF-QDLGWQD--WIIAP-K |
| Mus musculus Bmp7 | (none) | RQACKKHELYVSF-RDLGWQD--WIIAP-E |
| Mus musculus Gdf1 | (none) | VGTCRTRRLHVSF-REVGWHR--WVIAP-R |
| Mus musculus Gdf11 | (none) | ESRCCRYPLTVDF-EAFGW-D--WIIAP-K |
| Mus musculus Gdf3 | (none) | RNFCHRHQLFINF-QDLGWHK--WVIAP-K |
| Mus musculus Gdf5 | (none) | KARCSRKALHVNF-KDMGWDD--WIIAP-L |
| Mus musculus Gdf6 | (none) | RLRCSRKPLHVNF-KELGWDD--WIIAP-L |
| Mus musculus Gdf7 | (none) | RSRCSRKSLHVDF-KELGWDD--WIIAP-L |
| Mus musculus Gdf8 | (none) | ESRCCRYPLTVDF-EAFGW-D--WIIAP-K |
| Mus musculus Lefty1 | (none) | GTRCCRQEMYLDL-QGMKWAEN-WILEP-P |
| Mus musculus Nodal | (none) | SQLCRRVKFQVDF-NLIGWGS--WIIYP-K |
| Mus musculus Tgfb1 | (none) | EKNCCVRQLYIDFRKDLGWK---WIHEP-K |
| Mus musculus Tgfb2 | (none) | QDNCCLRPLYIDFKRDLGWK---WIHEP-K |
| Mus musculus Tgfb3 | (none) | EENCCVRPLYIDFRQDLGWK---WVHEP-K |
| Nematostella vectensis Activin | (none) | MRECCRQEFYVSF-EEMGWDN--WILVP-R |
| Nematostella vectensis Bmp2/4 | (none) | PQYCQRHPLYVDF-TDVGWND--WIVAP-P |
| Nematostella vectensis Bmp5-8 | (none) | KKVCQRQALHVSF-RKLRWQD--WVIAP-E |
| Nematostella vectensis Gdf5-like | (none) | KRKCRRKRMYVDF-RLLGWSD--WIIAP-Q |
| Nematostella vectensis Gdf8 | (none) | ERRCCRYELTVDF-EKFSWN---WIIAP-K |
| Oscarella carmela Tgf3 | (none) | EDVCKRHPLLVNF-TDVGWF---HIIHP-P |
| Oscarella carmela Tgf2 | (none) | NKVCRRKKLNFSF-VEMAWGN--WIVAP-L |
| Oscarella carmela Activin-like | (none) | QERCCRMPLTITL-EDLGWSS--WVFAP-S |
| Oscarella carmela Tgf1 | (none) | NGVCSRRSYYVDF-QKIGWS---HIVRP-L |
| Oscarella carmela Tgfb1 | (none) | LDNCCIREFYIDFKKDLGWT---WIIQP-K |
| Oscarella carmela Tgfb2 | (none) | SGCCGLNELYVDFHRDLGFH---WIIQP-S |
| Saccoglossus kowalevskii Activin-like | (none) | ISICCRKSFYVSF-EDIHWND--WIIEP-S |
| Saccoglossus kowalevskii Admp | (none) | KTPCSKQKLYVDF-EEIGWSG--WIISP-R |
| Saccoglossus kowalevskii Bmp10-like | (none) | KNACQRQPMYVHF-KDIGWDE--WIIAP-K |
| Saccoglossus kowalevskii Bmp2/4 | (none) | KLNCKRHELYVDF-NDVGWND--WIVAP-P |
| Saccoglossus kowalevskii Bmp3-like | (none) | WKLCGRHVMRVDF-QLIGWNA--YVISP-K |
| Saccoglossus kowalevskii Bmp5-8 | (none) | DRSCKKRSLVVSF-RELGWQD--WIIAP-D |
| Saccoglossus kowalevskii Gdf8/11-like | (none) | EERCCRYPLVVDF-VELTW-D--WIIAP-K |
| Saccoglossus kowalevskii Lefty | (none) | SETCCRRPKYISF-RNMEWTNR-WIIEP-R |
| Saccoglossus kowalevskii NodalA | (none) | HP-CERVELIVDF-DKIGWGS--WIIFP-K |
| Saccoglossus kowalevskii Tgfb2 | (none) | ETNCCLRQLYIDFKKDLGWT---WIHAP-Q |
| Saccoglossus kowalevskii Univin-like | (none) | ADICKRHPLYVNF-REVGWHD--WIIAP-A |
| Strongylocentrotus purpuratus Bmp2/4 | (none) | KANCRRHELYVDF-SDVHWND--WIVAP-A |
| Strongylocentrotus purpuratus Bmp3 | (none) | TNVCDRHSMNVDF-QAIGWDD--YVIAP-A |
| Strongylocentrotus purpuratus Lefty | (none) | EHRCCRRRKYVDF-RDLSWTSR-WIIEP-A |
| Strongylocentrotus purpuratus Nodal | (none) | GP-CRRIDMDVDF-GRIGWDE--WIIYP-K |
| Strongylocentrotus purpuratus Univin | (none) | TNLCQRHRLFVSF-RDVGWEN--WIIAP-M |
| Tribolium castaneum Activin | (none) | GNQCCKQRFYVSF-KQLGWDD--WVIAP-Q |
| Tribolium castaneum Gdf8 | (none) | EPLCCRYPLTVDF-EEFGW-D--FIIAP-K |
| Xenopus laevis InhibinbB | (none) | TNLCCRQQFYIDF-RLIGWND--WIIAP-A |
| Xenopus laevis InhibinbC | (none) | SNLCCRKDYYVDF-KDIGWND--WIIKP-E |
| Xenopus laevis Admp | (none) | QLPCQRHPLYVDF-EEIGWSG--WIISP-R |
| Xenopus laevis Bmp2 | (none) | KSSCRRHPLYVDF-SDVGWND--WIVAP-P |
| Xenopus laevis Bmp3 | (none) | PRNCARRYLKVDF-ADIGWSE--WIISP-K |
| Xenopus laevis Bmp4 | (none) | NKHCRRHSLYVDF-SDVGWND--WIVAP-P |
| Xenopus laevis Bmp6 | (none) | KTACRKHELYVSF-QDLGWQD--WIIAP-K |
| Xenopus laevis Bmp7 | (none) | KQACKKHELFVSF-RDLGWQD--WIIAP-E |
| Xenopus laevis Vg-1 | (none) | SNICKKRRLYVEF-KDVGWQN--WVIAP-Q |
| Xenopus laevis Derriere | (none) | SNICKKRRLYIDF-KDVGWQN--WVIAP-R |
| Xenopus laevis Gdf6 | (none) | RLRCSKKPLHVNF-KELGWDD--WIIAP-L |
| Xenopus laevis Gdf7 | (none) | KTRCSKKPLLVNF-KELGWDD--WIIAP-L |
| Xenopus laevis Lefty | (none) | DNICCREEYFINF-RELTWTQY-WIIEP-A |
| Xenopus laevis Ndr1 | (none) | KPLCRRVDMIVDF-EDIGWSS--WIVYP-K |
| Xenopus laevis Ndr2A | (none) | KTLCRRVDMIVDF-EKIEWGD--RIVYP-K |
| Xenopus laevis Tgfb1 | (none) | GPNCCVKPLYINFRKDLGWK---WIHEP-K |
| Xenopus laevis Tgfb2 | (none) | QDNCCLRPLYIDFKKDLGWK---WIHEP-K |
| Xenopus tropicalis Bmp10-like | (none) | GNYCKKTPLYIDF-GEIGWNS--WIIAP-Q |
| Xenopus tropicalis Bmp5-like | (none) | KQACKKHELYVSF-RDLGWED--WIIAP-E |
| Xenopus tropicalis Gdf11-like | (none) | ESRCCRYPLTVDF-EAFGW-D--WIIAP-K |
| Xenopus tropicalis Gdf5 | (none) | KARCSKKPLHVNF-KDMGWDD--WIIAP-L |
| Xenopus tropicalis Gdf6 | (none) | RLRCSKKPLHVNF-KELGWDD--WIIAP-L |
| Xenopus tropicalis Gdf8-like | (none) | ESRCCRYPLTVDF-EAFGW-D--WIIAP-K |
Columns
None of the columns has a description.
