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Matrix 23501 of Study 16190
Citation title: "Nodal signalling determines biradial asymmetry in Hydra".
Study name: "Nodal signalling determines biradial asymmetry in Hydra".
This study is part of submission 16190
(Status: Published).
Matrices
Title: Prd/Pitx transcription factor gene superfamily alignment
Description: Fig E6
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Acropora digitifera Mixer-like | (none) | KQDVKRKRKNLTKEQLEILESVYRKEKYPH |
| Acropora millepora Mixer-like | (none) | KQDVKRKRKNLTKEQLEILESVYKKEKYPH |
| Nematostella vectensis Mixer-like | (none) | RADIKRKRRNLTKRQQKILETAYSTIKYPT |
| Danio rerio Mixer | (none) | LFTHRRKRTNFTQQQIDVLEKVYLDTKYPD |
| Mus musculus MixerL1 | (none) | SAPQRRKRTSFSSEQLQLLELVFRQTMYPD |
| Danio rerio Uncx4.1 | (none) | GCKRRRTRTNFTGWQLEELEKAFNESHYPD |
| Mus musculus Uncx4.1 | (none) | GCKRRRTRTNFTGWQLEELEKAFNESHYPD |
| Lottia gigantea Unc4.1 | (none) | AAKRRRTRTNFTGWQLEELEKAFNDSHYPD |
| Saccoglossus kowalevskii Unc4.1 | (none) | SGKRRRTRTNFNGWQLEELEKAFNDSHYPD |
| Branchiostoma floridae Unc4 | (none) | PPKRRRTRTNFNSWQLEELERAFQESHYPD |
| Drosophila melanogaster Unc4 | (none) | AAKRRRSRTNFNSWQLEELERAFSASHYPD |
| Branchiostoma floridae Unc4c | (none) | KPRRMRVRTNFTSWQLEALERAFETTHYPD |
| Saccoglossus kowalevskii Unc4c-like | (none) | KSRRMRVRTNFAAWQLDELERAFETTHYPD |
| Acropora digitifera Unc4c | (none) | KPRRMRVRTNFSPWQLEQLERAFETTHYPD |
| Acropora millepora Unc4c | (none) | KPRRMRVRTNFSPWQLEQLERAFETTHYPD |
| Nematostella vectensis Unc4c | (none) | ---RMRVRTNFSPWQLEELEHAFETTHYPD |
| Acropora digitifera Unc4.1 | (none) | LPKKRRSRTNFDAWQLGELERVFKKTQYPD |
| Acropora millepora Unc4.1 | (none) | LPKKRRSRTNFDAWQLGELERVFKKTQYPD |
| Nematostella vectensis Unc4.1 | (none) | LPKRRRSRTNFDSWQLEELEKIYHHNQYPD |
| Hydra magnipapillata Unc4.1 | (none) | ------MRTNFSPWQLEELETAFKKSYYPD |
| Tribolium castaneum Alx | (none) | KRKQRRYRTTFTSYQLEELEKAFSRTHYPD |
| Drosophila melanogaster Alx | (none) | KRKQRRYRTTFTSFQLEELEKAFSRTHYPD |
| Oscarella carmela Arx-likeB | (none) | KRKQRRNRTTFTAQQLEEMEKVFSRTHYPD |
| Danio rerio Arx-like | (none) | KRKQRRYRTTFTSYQLEELERAFQKTHYPD |
| Branchiostoma floridae Q50 | (none) | KRKQRRYRTTFTSYQLEELERAFAKTHYPD |
| Mnemiopsis leidyi PRD61 | (none) | ---QRRNRTTFSSVQLHELERAFQQSHYPD |
| Ciona intestinalis 118343665 | (none) | KRKQRRYRTTFSAFQLEELERAFQKTHYPD |
| Acropora digitifera Arx | (none) | KRKQRRYRTTFTSLQLEELERAFSKTHYPD |
| Acropora millepora Arx | (none) | KRKQRRYRTTFTSLQLEELERAFSKTHYPD |
| Nematostella vectensis Arx | (none) | KRKQRRYRTTFTSYQLEELERAFAKTHYPD |
| Oscarella carmela Arx-likeA | (none) | PRKQRRYRTTFSPAQLQMLEDAFSKTHYPD |
| Trichoplax adhaerens 196002946 | (none) | ---RKRYRTTFTSQQLEELERAFELAPYPD |
| Amphimedon queenslandica Arx-likeB | (none) | KGKQRRHRTNFTSHQLEELEKAFEKTRYPD |
| Oscarella carmela Arx-likeC | (none) | KRKQRRYRTTFSSVQLEELEHAFEKTHYPD |
| Acropora digitifera Alx | (none) | KRKKRRNRTTFTSFQLEEMERIFQKTHYPD |
| Acropora millepora Alx | (none) | KRKKRRNRTTFTSFQLEEMERIFQKTHYPD |
| Nematostella vectensis Alx | (none) | KRKKRRNRTTFTAYQLEEMERVFQKTHYPD |
| Saccoglossus kowalevskii Alx | (none) | KRKKRRNRTTFTSFQLDEMEKVFQRTHYPD |
| Branchiostoma floridae Alx-like | (none) | KKKKRRNRTTFTSFQLEEMERVFQKTHYPD |
| Mus musculus ALX1 | (none) | SSKKRRHRTTFTSLQLEELEKVFQKTHYPD |
| Danio rerio Alx1 | (none) | SSKKRRHRTTFTSAQLEELEKVFQKTHYPD |
| Mnemiopsis leidyi PRD43 | (none) | ---SRRFRTTFTSCQLQALEGAFQQTHYPD |
| Amphimedon queenslandica Arx-likeA | (none) | KRQQRRFRTTFTSYQLQELEAAFAKTHYPD |
| Branchiostoma floridae Rx | (none) | GEKPKRNRTTFSTRQLQELERAFRQTHYPD |
| Saccoglossus kowalevskii Rx-like | (none) | G-KPKRSRTTFSSRQLQELERAFRRTHYPD |
| Amphimedon queenslandica Arx-likeC | (none) | IMKSKRNRTTFTAHQLDELEMIFRQTHYPD |
| Cladonema pacificum Otp | (none) | PSKQKRHRTRFSPAQLNELERYFSKTHYPD |
| Lottia gigantea Otp | (none) | PSKQKRHRTRFTPAQLNELERSFAKTHYPD |
| Saccoglossus kowalevskii Otp | (none) | PLKQKRHRTRFTPAQLNELERNFAKTHYPD |
| Danio rerio OtpB | (none) | QQKQKRHRTRFTPAQLNELERSFAKTHYPD |
| Mus musculus OTP | (none) | QQKQKRHRTRFTPAQLNELERSFAKTHYPD |
| Drosophila melanogaster Otp | (none) | QQDQKRHRTRFTPAQLNELERCFSKTHYPD |
| Trichoplax adhaerens Otp | (none) | ---PKRHRTRFTPGQLSELERCFSKTHYPD |
| Ciona intestinalis Otp | (none) | VTKSKRHRTRFAPSQLSELERSFSSTHYPD |
| Acropora digitifera Otp | (none) | GVKQKRHRTRFTPAQLNELERCFARTHYPD |
| Acropora millepora Otp | (none) | GVKQKRHRTRFTPAQLNELERCFARTHYPD |
| Nematostella vectensis Otp | (none) | AAKQKRHRTRFTPAQLNELERCFARTHYPD |
| Hydra magnipapillata Otp | (none) | HSKQKRHRTRFTQTQLNELERYFNKTHYPD |
| Hydra magnipapillata Rx | (none) | RQKLRRNRTTFTTYQLHQLERSFDKTQYPD |
| Trichoplax adhaerens Rx | (none) | ---LRRSRTTFTTLQLHQLERAFEKTQYPD |
| Tribolium castaneum Rx | (none) | KKKHRRNRTTFTTYQLHELERAFEKSHYPD |
| Mus musculus Rx | (none) | KKKHRRNRTTFTTYQLHELERAFEKSHYPD |
| Danio rerio Rx1 | (none) | KKKHRRNRTTFTTYQLHELERAFEKSHYPD |
| Lottia gigantea Rx | (none) | KKKHRRNRTTFTTYQLHELERAFEKSHYPD |
| Drosophila melanogaster Rx | (none) | KKKHRRNRTTFTTYQLHELERAFEKSHYPD |
| Branchiostoma floridae Rax | (none) | KKKHRRNRTTFTTFQLHELERAFEKSHYPD |
| Saccoglossus kowalevskii Rx | (none) | KKKHRRNRTTFTTFQLHELERAFEKSHYPD |
| Acropora digitifera Rx | (none) | TKKHRRNRTTFTTFQLHELEQAFEKSHYPD |
| Acropora millepora Rx | (none) | TKKHRRNRTTFTTFQLHELEQAFEKSHYPD |
| Nematostella vectensis Rx | (none) | KKKLRRNRTTFTTFQLHELERAFEKSHYPD |
| Lottia gigantea Pax6 | (none) | RQKLRRNRTTFCQSQLEVLEQEFLKTHYPG |
| Acropora digitifera Pax6b | (none) | ---LRRNRTTFTSEQLDILEREFEKTHYPG |
| Saccoglossus kowalevskii Eyegone | (none) | KKKSRRSRTTFSGDQLDVLEKEFDKTHYPC |
| Drosophila melanogaster Eyegone | (none) | EPKFRRNRTTFSPEQLEELEKEFDKSHYPC |
| Nematostella vectensis PaxC | (none) | KRKLRRNRTTFTPDQLEMLEKEFEKSHYPD |
| Cladonema pacificum ArxC | (none) | KRKQRRYRTTFTQFQLDELERAFDKTHYPD |
| Cladonema pacificum ArxD | (none) | ----RRYRTTFTQLQLDELERAFEKTHYPD |
| Cladonema pacificum ArxB | (none) | RRGHRRNRTTFTRQQLEELEKLFDSTHYPD |
| Cladonema pacificum ArxA | (none) | PRKLRRSRTTFTTYQLHQLERAFDKTQYPD |
| Acropora millepora 1217446 | (none) | RSYQRRNRTKFTPEQIEELESAFKKTQYPD |
| Danio rerio Pax3 | (none) | KRKQRRSRTTFTAEQLEELERAFERTHYPD |
| Mus musculus Pax7 | (none) | KRKQRRSRTTFTAEQLEELEKAFERTHYPD |
| Branchiostoma floridae Pax3/7 | (none) | KRKQRRSRTTFTPEQLEELEKAFERTHYPD |
| Lottia gigantea Pax3/7 | (none) | TRKMRRNRTTFSGEQLEELEKVFEKTHYPD |
| Acropora digitifera Pax3/7a | (none) | ARKQRRSRTKFTHAQLNALEKAFQKTQYPD |
| Acropora millepora Pax3/7a | (none) | ARKQRRSRTKFTHAQLNALEKAFQKTQYPD |
| Nematostella vectensis PaxD2 | (none) | TRKQRRSRTKFTSKQVDELEKAFLKTQYPD |
| Drosophila melanogaster Gooseberry | (none) | KRKQRRSRTTFSNDQIDALERIFARTQYPD |
| Acropora digitifera Pax3/7b | (none) | SRKPRRGRTKFSLKQVDELEKAFAKTHYPD |
| Acropora millepora Pax3/7b | (none) | SRKPRRGRTKFSLKQVDELEKAFAKTHYPD |
| Nematostella vectensis PaxD | (none) | CHKPRRSRTRFTVSQTDELERAFRKTHYPD |
| Mus musculus Pax6 | (none) | KRKLQRNRTSFTQEQIEALEKEFERTHYPD |
| Danio rerio Pax6 | (none) | KRKLQRNRTSFTQEQIEALEKEFERTHYPD |
| Branchiostoma floridae Pax6 | (none) | KRKLQRNRTSFTQEQIEALEKEFERTHYPD |
| Saccoglossus kowalevskii Pax6 | (none) | KRKLQRNRTSFTQYQIETLEKEFERTHYPD |
| Acropora digitifera Pax6a | (none) | HKIVRRQRTTFSGEQIEQLEKTFEKTHYPD |
| Acropora millepora Pax6a | (none) | HKIVRRQRTTFSGEQIEQLEKTFEKTHYPD |
| Nematostella vectensis PaxB | (none) | SKMSRRQRTNFTDEQIEKLEKVFEKTHYPD |
| Lottia gigantea Dmbx1 | (none) | HRKQRRSRTAFTNQQLAALEKTFGKTHYPD |
| Saccoglossus kowalevskii Dmbx | (none) | HRKQRRSRTAFTNQQLAALEKTFAKTHYPD |
| Mus musculus Dmbx1a | (none) | HRKQRRSRTAFTAQQLEALEKTFQKTHYPD |
| Branchiostoma floridae Dmbx | (none) | HRKQRRSRTAFTSQQLAALEKCFQKTHYPD |
| Danio rerio Dmbx1 | (none) | QQKQRRSRTAFSVSQLQALEKAFQQTQYPD |
| Acropora digitifera DmbxB | (none) | RRAPRRSRTAFTHQQLGILEKAFSKTHYPD |
| Acropora millepora DmbxB | (none) | RRAPRRSRTAFTHQQLGILEKAFSKTHYPD |
| Nematostella vectensis DmbxB | (none) | RRGSRRTRTAFTHQQLTALEKVFSKTHYPD |
| Nematostella vectensis DmbxA | (none) | RAKHRRTRTAFTHQQLQILESTFSKTHYPD |
| Nematostella vectensis DmbxC | (none) | KKKPRRMRTCFTPYQLQVLENTFCNTHYPD |
| Acropora digitifera DmbxD | (none) | GRKIRRTRTTFNQFQLETLERTFARTHYPD |
| Nematostella vectensis DmbxD | (none) | GRKIRRTRTTFNQFQLDTLERAFSRTHYPD |
| Hydra magnipapillata Dmbx | (none) | GRKHRRVRTAFTHHQLTTLERTFETSHYPD |
| Acropora digitifera OtxA | (none) | PRKQRRERTTFTKAQLEILEELFTKTKYPD |
| Acropora millepora OtxA | (none) | PRKQRRERTTFTKAQLEILEELFTKTKYPD |
| Acropora millepora OtxB | (none) | PRKQRRERTTFTKAQLEILDELFAKTKYPD |
| Acropora digitifera OtxB | (none) | PRKQRRERTTFTKAQLEILDELFAKTKYPD |
| Acropora digitifera OtxC | (none) | PRKQRRERTTFTKAQLEILEELFSKTKYPD |
| Nematostella vectensis OtxB | (none) | PRKQRRERTTFTKNQLEILEELFAKTRYPD |
| Nematostella vectensis OtxC | (none) | PRKQRRERTTFTKNQLEILEELFAKTRYPD |
| Nematostella vectensis OtxA | (none) | TRKQRRERTTFTKNQLEVLEELFAKTRYPD |
| Cladonema pacificum OtxB | (none) | ----RRERTTFTKSQLEILEDLFTKTHYPD |
| Hydra magnipapillata OtxB | (none) | PRKQRRERTTFTKSQLEILEELFLKTHYPD |
| Danio rerio OTX1b | (none) | PRKQRRERTTFTRSQLDILEALFAKTRYPD |
| Mus musculus OTX1 | (none) | PRKQRRERTTFTRSQLDVLEALFAKTRYPD |
| Danio rerio Otx2 | (none) | PRKQRRERTTFTRAQLDVLEALFAKTRYPD |
| Tribolium castaneum Otx2 | (none) | QRKQRRERTTFTRAQLDVLEALFGKTRYPD |
| Drosophila melanogaster Otx | (none) | TRKQRRERTTFTRAQLDVLEALFGKTRYPD |
| Branchiostoma floridae Otx | (none) | PRKQRRERTTFTRAQLDVLEALFAKTRYPD |
| Lottia gigantea Otx | (none) | PRKQRRERTTFTRAQLDVLESLFQKTRYPD |
| Ciona intestinalis OTX | (none) | SRKQRRERTTFTRAQLDILEALFGKTRYPD |
| Saccoglossus kowalevskii Otx | (none) | PRKQRRERTTFTRAQLDILESLFGKTRYPD |
| Tribolium castaneum Otx1 | (none) | PRKQRRERTTFTRAQLDLLEGLFAKTRYPD |
| Acropora digitifera OtxD | (none) | PRKQRRERTTFTKAQLKLLDELFAKTKYPD |
| Hydra magnipapillata OtxA | (none) | PRKQRRERTTFTKFQLEILDNLFKETKYPD |
| Cladonema pacificum OtxA | (none) | PRKQRRERTTFTKGQLEILENLFRETKYPD |
| Hydra magnipapillata Otx1/2 | (none) | PPKRRRERTTFTKAQLDVLEDMFGKTMYPD |
| Tribolium castaneum Pitx1 | (none) | TKRQRRQRTHFTSQQLQELEATFARNRYPD |
| Drosophila melanogaster Ptx1 | (none) | NKRQRRQRTHFTSQQLQELEHTSSRNRYPD |
| Lottia gigantea Pitx2 | (none) | KKRQRRQRTHFTSQQLQELEATFARNRYPD |
| Danio rerio Pitx2 | (none) | KKRQRRQRTHFTSQQLQELEATFQRNRYPD |
| Mus musculus Pitx2 | (none) | KKRQRRQRTHFTSQQLQELEATFQRNRYPD |
| Danio rerio Pitx3 | (none) | KKKQRRQRTHFTSQQLQELEATFQRNRYPD |
| Saccoglossus kowalevskii Pitx2 | (none) | NRRQRRQRTHFTSQQLQELEAHFARNRYPD |
| Ciona intestinalis Pitx | (none) | KRRQRRQRTHFTSQQLQELEALFARNRYPD |
| Branchiostoma floridae Pitx2 | (none) | RRRQRRQRTHFTSQQLQELEASFARNRYPD |
| Trichoplax adhaerens Pitx | (none) | KRRPRRQRTHFTSYQLQELEAAFARNRYPD |
| Acropora digitifera Pitx | (none) | KRKQRRQRTHFTSYQLQEMEAMFARNRYPD |
| Acropora millepora Pitx | (none) | KRKQRRQRTHFTSYQLQEMEAMFARNRYPD |
| Nematostella vectensis Pitx | (none) | KRKQRRQRTHFTSFQLQQLEGTFGRNRYPD |
| Hydra magnipapillata Pitx | (none) | DNRIRRQRTHFTVTQLHRLETCFARNRYPD |
| Cladonema pacificum Pitx | (none) | DHRIRRQRTHFTVTQLQKLEACFARNRYPD |
| Acropora digitifera Gsc | (none) | PKRKRRHRTIFTEEQLDLLEGTFQKTHYPD |
| Acropora millepora Gsc | (none) | PKRKRRHRTIFTEEQLDLLEGTFQKTHYPD |
| Nematostella vectensis Gsc | (none) | PKRKRRHRTIFTEEQLELLETTFQKTHYPD |
| Lottia gigantea Gsc | (none) | QKRKRRHRTIFTEEQLEQLENTFHKTHYPD |
| Branchiostoma floridae Gsc | (none) | -RRKRRHRTIFTEEQLELLEKTFEKTHYPD |
| Tribolium castaneum Gsc | (none) | PKRKRRHRTIFSEEQLEQLEATFEQTHYPD |
| Drosophila melanogaster Gsc | (none) | PKRKRRHRTIFTEEQLEQLEATFDKTHYPD |
| Ciona intestinalis Gsc | (none) | AKRKRRHRTIFTEDQLEALENMFQKTHYPD |
| Danio rerio Gsc | (none) | CRRKRRHRTIFTDEQLEALENLFQETKYPD |
| Mus musculus Gsc | (none) | CRRKRRHRTIFTDEQLEALENLFQETKYPD |
| Trichoplax adhaerens Gsc | (none) | ---KRRHRTIFTDEQIAELEKLYEQTQYPD |
| Cladonema pacificum Gsc | (none) | STNKRRQRTIFTEHQLHVLEQMFSRTHYPD |
| Hydra magnipapillata Gsc | (none) | HFLKRRHRTIFSDEQLNVLERLFNKTHYPD |
| Hydra magnipapillata Arx-like | (none) | IENNKRNRTIFSKKQSCVLEDVFKKTHYPD |
Columns
None of the columns has a description.
