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Matrix 23732 of Study 381
Citation title: "Phylogenetic analyses of DNA and allozyme data suggest that Gonioctena leaf beetles (Coleoptera; Chrysomelidae) experienced convergent evolution in their history of host-plant family shifts.".
This study was previously identified under the legacy study ID S324
(Status: Published).
Matrices
Title: Encyclia chloroplast combined
Description: combined matrix rpl32-trnL + ycf1
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Bletia purpurea 225 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Artorima erubescens 135 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Broughtonia sanguinea 67 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia adenocarpon 07 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia adenocaula 32 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia adenocaula GAS6851 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia aenicta 195 | (none) | -TTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia aenicta JAL14 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia alata 20 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia alata 25 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia alata 76 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia ambigua 200 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia angustiloba 38 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia aspera 31 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia asperula 136 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia atrorubens | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia atrorubens 24 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia betancourtiana 06 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia bipapularis 22 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia bractescens 140 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia bractescens OAX60 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia bractescens QR62 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia calderoniae OAX69 | (none) | TTTGG--G--AAAAAAAGGAT---C-TTTA |
| Encyclia calderoniae | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia candollei 149 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia ceratistes 154 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia ceratistes 169 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia ceratistes MX101 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia ceratistes VE63 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia chiapasensis 218 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia chloroleuca 115 | (none) | TTTGG-GA--AAAAAAAGGAT--TCTTTTA |
| Encyclia chloroleuca 74 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia chloroleuca OAX77 | (none) | TTTG------AAAAAAAAGAT---C-TTTA |
| Encyclia cordigera x E. hanburyi G13 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia cordigera AraVE02 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia cordigera CH58 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia dickinsoniana 201 | (none) | TTTGGGAA--AAAAAAAGGAT---C-TTTA |
| Encyclia dickinsoniana 98 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia diota 165 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia diota OAX04 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia fucata 44 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia garciae-esquivelii 26 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia gravida 78 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia halbingeriana 215 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia hanburyi 191 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia hanburyi G12 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia hanburyi Granados457 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia huertae 43 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia incumbens 138 | (none) | TTTGG-GA--AAAAAAAGGAT--CCTTTTA |
| Encyclia incumbens 75 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia incumbens 90 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia kennedyi 207 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia leucantha 13 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia leucantha 33 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia megalantha 39 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia meliosma 196 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia meliosma GUE18 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia microbulbon GAS7446 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia microbulbon OAX05 | (none) | TTTGGAAA--AAAAAAAGGAT---C-TTTA |
| Encyclia naranjapatensis 121 | (none) | TTTGG-AA--AAAAAAAGGAT-TCCTTTTA |
| Encyclia nemat X bract 48 | (none) | TTTGG-GA--AAAAAAAGGAT---C-TTTA |
| Encyclia nematocaulon CICY01 | (none) | -TTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia nematocaulon OAX56 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia nematocaulon YUC57 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia nizandensis 28 | (none) | TTTGG-AA--AAAAAAAGGAT---CTTTTA |
| Encyclia nizandensis 99 | (none) | TTTGG-AA--AAAAAAAGGAT---CTTTTA |
| Encyclia nizandensis Perez2475 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia nizandensis Perez2476 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia nizandensis Perez2478 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia nizandensis TIPO228 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia oestlundii 34 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia ovulum 213 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia papillosa CH16 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia parviflora 12 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia parviflora 172 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia pollardiana 42 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia profusa 100 | (none) | TTTGG-AA--AAAAAAGGGATT-CCTTTTA |
| Encyclia huertae 83 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia randii 49 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia remotiflora 29 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia rzedowskiana OAX11 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia selligera 137 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia selligera 190 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia selligera 89 | (none) | TTTGG--A--AAAAAAAGGAT--TC--TTA |
| Encyclia hanburyi 17 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia spatella 214 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia spatella MO202 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia stellata ZuVE19 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia suaveolens | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia trachycarpa JAL08 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia trachychila 182-B | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia tuerckheimii 188 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia tuerckheimii 194 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Encyclia uxpanapensis VER23 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Encyclia uxpanapensis VER85 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Euchile citrina 71 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Laelia rubescens 73 | (none) | TTTGG-AA--AAAGAAAGGAT---C-TTTA |
| Nidema boothii 51 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Prosthechea varicosa 72 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
| Prosthechea cochleata 53 | (none) | TTTGG--A--AAAAAAAGGAT---C-TTTA |
| Prosthechea livida 52 | (none) | TTTGG-AA--AAAAAAAGGAT---C-TTTA |
Columns
None of the columns has a description.
