TreeBASE Search-Matrix 33647 of study 18010

@ARTICLE{TreeBASE2Ref24889, author = {jing L? and Haicui Suo and Rong Yi and Qibin Ma}, title = {Glyma11g13220, a homolog of the vernalization pathway gene VERNALIZATION 1 from soybean [Glycine max (L.) Merr.], promotes flowering in Arabidopsis thaliana.}, year = {2015}, keywords = {Glyma11g13220, Flowering time, Vernalization pathway, Soybean}, doi = {10.1186/s12870-015-0602-6}, url = {http://}, pmid = {}, journal = {BMC Plant Biology}, volume = {15}, number = {232}, pages = {1--12}, abstract = {Background: The precise timing of flowering is fundamental to successful reproduction, and has dramatic significance for crop yields. Although prolonged low temperatures are not required for flowering induction in soybean, vernalization pathway genes have been retained during the evolution of this species. Little information is currently available in regarding these genes in soybean. Results: We were able to detect the expression of Glyma11g13220 in different organs at all monitored developmental stages in soybean. Glyma11g13220 expression was higher in leaves and pods than in shoot apexes and stems. In addition, Glyma11g13220 was responsive to photoperiod and low temperature in soybean. Furthermore, Glyma11g13220 was found to be a nuclear-localized protein. Over-expression of Glyma11g13220 in an Arabidopsis Columbia-0 (Col-0) background resulted in early flowering. Quantitative real-time PCR analysis revealed that transcript levels of flower repressor FLOWERING LOCUS C (FLC), and FD decreased significantly in transgenic Arabidopsis compared with wild-type Col-0, while the expression of VERNALIZATION INSENSITIVE 3 (VIN3) and FLOWERING LOCUS T (FT) noticeably increased. Conclusions: Our results suggest that Glyma11g13220, a homolog of Arabidopsis VRN1, is a functional protein. Glyma11g13220, which is responsive to photoperiod and low temperature in soybean, may participate in the vernalization pathway in Arabidopsis and help regulate flowering time. Arabidopsis VRN1 and Glyma11g13220 exhibit conserved as well as diverged functions.} }

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Matrix 33647 of Study 18010

Citation title: "Glyma11g13220, a homolog of the vernalization pathway gene VERNALIZATION 1 from soybean [Glycine max (L.) Merr.], promotes flowering in Arabidopsis thaliana.".

Study name: "Glyma11g13220, a homolog of the vernalization pathway gene VERNALIZATION 1 from soybean [Glycine max (L.) Merr.], promotes flowering in Arabidopsis thaliana.".

This study is part of submission 18010 (Status: Published).

Matrices

Title: F2 Glyma11g13220, a homolog of the vernalization pathway

Rows

Taxon Label	Row Segments	Characters 1?–30
Glycine max Glyma11g13220	(none)	---------------------------MRD
Glycine max Glyma11g13231	(none)	------------------------------
Glycine max Glyma12g05261	(none)	----------------------MYLYQVSF
Glycine max Glyma14g08641	(none)	------------------------------
Glycine max Glyma17g36490	(none)	------------------------------
Glycine max Glyma14g08630	(none)	------------------------------
Glycine max Glyma17g36471	(none)	------------------------------
Arabidopsis thaliana AT3G06220	(none)	-------------------------ATGGC
Arabidopsis thaliana AT5G18000	(none)	------------------------------
Glycine max Glyma20g01130	(none)	------------------------------
Glycine max Glyma07g21160	(none)	------------------------------
Arabidopsis thaliana AT3G18990 VRN1	(none)	------------------------------
Glycine max Glyma07g19395	(none)	------------------------------
Glycine max Glyma09g20150	(none)	MLQINISSSQEAIALFFFFFISFSALLSQK
Glycine max Glyma20g24211	(none)	------------------------------
Glycine max Glyma12g05250	(none)	------------------------------
Arabidopsis thaliana AT4G34400	(none)	------------------------------
Arabidopsis thaliana AT3G06160	(none)	------------------------------
Glycine max Glyma20g24222	(none)	------------------------------
Arabidopsis thaliana AT5G18090	(none)	------------------------------
Arabidopsis thaliana AT1G16640	(none)	------------------------------
Arabidopsis thaliana AT1G49480	(none)	------------------------------
Glycine max Glyma01g11755	(none)	------------------------------
Arabidopsis thaliana AT1G49475	(none)	---------------------------MRN
Arabidopsis thaliana AT4G01580	(none)	------------------------------
Glycine max Glyma08g44640	(none)	------------------------------
Glycine max Glyma03g40651	(none)	------------------------------
Arabidopsis thaliana AT5G57720	(none)	------------------------------
Arabidopsis thaliana AT3G53310	(none)	------------------------------
Glycine max Glyma07g35040	(none)	------------------------------
Glycine max Glyma11g13350	(none)	------------------------------

Columns

None of the columns has a description.