TreeBASE Search-Matrix 214 of study 1950

@ARTICLE{TreeBASE2Ref14662, author = {Todd Barkman and Joel R McNeal and S. H. Lim and Gwen Coat and Henrietta B. Croom and Nelson D. Young and Claude W. dePamphilis}, title = {Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants}, year = {2007}, keywords = {}, doi = {}, url = {}, pmid = {}, journal = {BMC Evolutionary Biology}, volume = {}, number = {}, pages = {}, abstract = {Background Some of the most difficult phylogenetic questions in evolutionary biology involve identification of the free-living relatives of parasitic organisms, particularly those of parasitic flowering plants. Consequently, the number of origins of parasitism and the phylogenetic distribution of the heterotrophic lifestyle among angiosperm lineages is unclear. Results Here we report the results of a phylogenetic analysis of 102 species of seed plants designed to infer the position of all haustorial parasitic angiosperm lineages using three mitochondrial genes: atp1, coxI, and matR. Overall, the mtDNA phylogeny agrees with independent studies in terms of non-parasitic plant relationships and reveals at least 11 independent origins of parasitism in angiosperms, eight of which consist entirely of holoparasitic species that lack photosynthetic ability. From these results, it can be inferred that modern-day parasites have disproportionately evolved in certain lineages and that the endoparasitic habit has arisen by convergence in four clades. In addition, reduced taxon, single gene analyses revealed multiple horizontal transfers of atp1 from host to parasite lineage, suggesting that parasites may be important vectors of horizontal gene transfer in angiosperms. Furthermore, in Pilostyles we show evidence for a recent host-to-parasite atp1 transfer based on a chimeric gene sequence that indicates multiple historical xenologous gene acquisitions have occurred in this endoparasite. Finally, the phylogenetic relationships inferred for parasites indicate that the origins of parasitism in angiosperms are strongly correlated with horizontal acquisitions of the invasive coxI group I intron. Conclusions Collectively, these results indicate that the parasitic lifestyle has arisen repeatedly in angiosperm evolutionary history and results in increasing parasite genomic chimerism over time.} }

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Matrix 214 of Study 1950

Citation title: "Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants".

This study was previously identified under the legacy study ID S1932 (Status: Published).

Matrices

Title: 18S

Description: Legacy TreeBASE Matrix ID = M1038

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Rows

Taxon Label	Row Segments	Characters 1?–30
Sclerotinia sclerotiorum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Orbilia delicatula	View	GAT-GAA--GCCA-TGC-A---TGT-CTA-
Neobulgaria premnophila	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Monilinia laxa	View	------------------------------
Monilinia fructicola	View	------------------------------
Microglossum viride	View	------------------------------
Leotia lubrica	View	------------------------------
Cudonia confusa	View	---------------------------TA-
Sphaerophorus globosus	View	------------------------------
Mycocalicium albonigrum	View	------------------------------
Leifidium tenerum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Cyphelium inquinans	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Stereocaulon ramulosum	View	GAT-TAA--GCCA-TGC-A---TGT-CCA-
Siphula ceratites	View	------------------------------
Porpidia crustulata	View	------------------------------
Pilophorus acicularis	View	GAT-TAA--GCCA-TGC-A---TGT-CCA-
Lecanora dispersa	View	GAT-TAC---CCA-TGA-A---TGT-CTA-
Cladonia bellidiflora	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Cladia aggregata	View	---------------------------TA-
Chaenothecopsis savonica	View	----------------C-A---TGT-CTA-
Bunodophoron scrobiculatum	View	GAT-TAA--GCCA-TGC-A---TGT-CCA-
Neolecta irregularis	View	------------------------------
Saccharomyces barnettii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pichia membranaefaciens	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Hypomyces chrysospermus	View	-----------CA-TGC-A---TGT-CTA-
Hypocrea lutea	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Chaetopsina fulva	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Balansieae sp.	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Thermoascus crustaceus	View	------------------------------
Talaromyces flavus	View	------------A-TGC-A---TGT-CTA-
Verticillium dahliae2	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Verticillium dahliae1	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Epichloe baconii	View	------------A-TGC-A---TGT-CTA-
Glomerella glycines	View	----------GCA-TGC-A---TGT-CTA-
Claviceps purpurea	View	------------A-TGC-A---TGT-CTA-
Cordyceps capitata	View	------------A-TGC-A---TGT-CTA-
Spicellum roseum	View	GAT-TAA--GCCTATGC-A--GTGT-CTA-
Ascovaginospora stellipala	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Fusarium equiseti	View	------------------------------
Botrytis cinerea	View	------------------------------
Verticillium psalliotae	View	------------A-TGC-A---TGT-CTA-
Symbion of Hamiltonaphis styrac	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Nectria cinnabarina	View	------------------------------
Fusarium culmorum	View	------------------------------
Verticillium lecanii	View	------------A-TGC-A---TGT-CTA-
Gibberella pulicaris	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Diplodia tumefaciens	View	------------------------------
Kirschsteiniothelia maritima	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Magnaporthe grisea	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Xylaria carpophila	View	------------A-TGC-A---TGT-CTA-
Obolarina dryophila	View	------------------------------
Trichothecium roseum	View	--------------TGC-A---TGT-CTA-
Sarcinomyces crustaceus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Phaeosclera dematioides	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Monacrosporium haptotylum	View	------A--GCCA-TGC-A---TGT-CTA-
Monacrosporium gephyropaga	View	------A--GCCA-TGC-A---TGT-CTA-
Monacrosporium ellipsospora	View	------A--GCCA-TGC-A---TGT--TA-
Duddingtonia flagrans	View	------A--GCCA-TGC-A---TGT-CTA-
Dactylella rhopalota	View	------A--GCCA-TGC-A---TGT-CTA-
Dactylella oxyspora	View	------A--GCCA-TGC-A---TGT-CTA-
Coniosporium perforans	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Coniosporium apollinis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Arthrobotrys robusta	View	------A--GCCA-TGC-A---TGT-CTA-
Arthrobotrys dactyloides	View	------A--GCCA-TGC-A---TGT-CTA-
Arthrobotrys conoides	View	------A--GCCA-TGC-A---TGT-CTA-
Pseudallescheria ellipsoidea	View	------------A-TGC-A---TGT-CTA-
Pseudallescheria boydii	View	----------CCA-TGC-A---TGT-CTA-
Petriella setifera	View	----------CCA-TGC-A---TGT-CTA-
Microascus cirrosus	View	------------A-TGC-A---TGT-CTA-
Lomentospora prolificans	View	------------A-TGC-A---TGT-CTA-
Graphium tectonae	View	------------A-TGC-A---TGT-CTA-
Chaetomium elatum	View	------------A-TGC-A---TGT-CTA-
Ceratocystis fimbriata	View	----------CCA-TGC-A---TGT-CTA-
Spathularia flavida	View	-----------------------GC-TTA-
Talaromyces emersonii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Talaromyces eburneus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Talaromyces bacillisporus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Penicillium chrysogenum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Paecilomyces variotii	View	------------------------------
Paecilomyces tenuipes 2	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Neosartorya fischeri	View	------------A-TGC-A---TGT-CTA-
Monascus purpureus	View	------------A-TGC-A---TGT-CTA-
Merimbla ingelheimense	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Hemicarpenteles ornatus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Hamigera avellanea	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Geosmithia putterillii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Geosmithia namyslowskii	View	------------A-TGC-A---TGT-CTA-
Geosmithia lavendula	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Geosmithia cylindrospora	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Fennellia flavipes	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Eurotium rubrum	View	-----------CA-TGC-A---TGT-CTA-
Eurotium herbariorum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Eupenicillium javanicum	View	------------A-TGC-A---TGT-CTA-
Eupenicillium crustaceum	View	GAT-TA---GCCA-TGC-A---TGT-CTA-
Eremascus albus	View	------------A-TGC-A---TGT-CTA-
Emericella nidulans	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Chromocleista malachitea	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Chaetosartorya cremea	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Byssochlamys nivea	View	------------A-TGC-A---TGT-CTA-
Aspergillus zonatus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Aspergillus avenaceus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Ascosphaera apis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Blumeria graminis	View	------------------------------
Elaphomyces maculatus	View	------------------------T-CTA-
Elaphomyces leveillei	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Elaphomyces aculeatus	View	GAT-TAA--GCCA-TGC------GT-CTA-
Westerdykella dispersa	View	-----------CA-TGC-A---TGT-CTA-
Sporormia lignicola	View	-----------CA-TGC-A---TGT-CTA-
Phaeosphaeria nodorum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Mycosphaerella mycopappi	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Dothidea insculpta	View	-----------CA-TGC-A---TGT-CTA-
Dothidea hippophaeos	View	------------------------T-CTA-
Cucurbitaria elongata	View	-----------CA-TGC-A---TGT-CTA-
Cucurbitaria berberidis	View	-----------CA-TGC-A---TGT-CTA-
Cucurbidothis pithyophila	View	-----------CA-TGC-A---TGT-CTA-
Clathrospora diplospora	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Botryosphaeria ribis	View	-----------CA-TGC-A---TGT-CTA-
Botryosphaeria rhodina	View	-----------CA-TGC-A---TGT-CTA-
Aureobasidium pullulans	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Valsa leucostoma	View	------------A-TGC-A---AGT-CTA-
Endothia gyrosa	View	----TAA--GCCA-TGC-A---AGT-CTA-
Cryphonectria radicalis	View	----TAA--GCCA-TGC-A---AGT-CTA-
Cryphonectria parasitica	View	----TAA--GCCA-TGC-A---AGT-CTA-
Cryphonectria havanensis	View	----TAA--GCCA-TGC-A---AGT-CCA-
Cryphonectria cubensis	View	----TAA--GCCA-TGC-A---AGT-CTA-
Cyttaria darwinii	View	------------A-TGC-A---TGT-CTA-
Sarcinomyces phaeomuriformis	View	GTT-TAA--GCCA-TGC-A---TGT-CTA-
Phaeococcomyces exophialae	View	------------------A---TGT-CTA-
Phaeoannellomyces elegans	View	GCT-TAA--GCCA-TGC-A---TGT-CTA-
Nadsoniella nigra	View	------------A-TGC-A---TGT-CTA-
Herpotrichia juniperi	View	------------A-TGC-A---TGT-CTA-
Herpotrichia nigra	View	-----------CA-TGC-A---TGT-CTA-
Exophiala mansonii	View	---------GCCA-TGC-A---TGT-CTA-
Exophiala jeanselmei	View	GCT-TAC--GCCA-TGC-A---TGT-CTA-
Exophiala dermatitidis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Capronia pilosella	View	-----------CA-TGC-A---TGT-CTA-
Capronia mansonii	View	GCT-TAA--GCCA-TGC-A---TGT-CTA-
Thelomma mammosum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Texosporium sancti-jacobi	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Stenocybe pullatula	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Sphinctrina turbinata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Holleya sinecauda	View	GAT-TAA--GCC-ATGC-ATGT----CTA-
Endomyces sp.	View	G-T-T-A--GCCA-TGC-A---TGT-CTA-
Dipodascopsis uninucleata	View	------------A-TGC-A---TGT-CTA-
Candida albicans	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Saitoella complicata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Schizosaccharomyces japonicus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Taphrina californica	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Taphrina wiesneri	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Taphrina deformans	View	------------A-TGC-A---TGT-CTA-
Protomyces inouyei	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pneumocystis carinii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Xerocomus chrysenteron	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Cronartium ribicola	View	GAT-TAA--GCCA-TGC-----TGT-CTA-
Ustilago maydis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Fusarium oxysporum	View	------------------------------
Hypomyces polyporinus	View	------------------------------
Tolypocladium cylindrosporum	View	------------A-TGC-A---TGT-CTA-
Nectria haematococca	View	------------------------------
Diatrype disciformis	View	------------------A---TGT-CTA-
Gibberella avenacea	View	------------------------------
Fusarium cerealis	View	------------------------------
Fusarium merismoides	View	------------------------------
Neolecta vitellina	View	---------------GC-A---TGT-CTA-
Auxarthron zuffianum	View	------------A-TGC-A---TGT-CTA-
Blastomyces dermatitidis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Chrysosporium parvum	View	------------A-TGC-A---TGT-CTA-
Coccidioides immitis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Ctenomyces serratus	View	------------A-TGC-A---TGT-CTA-
Gymnoascoideus petalosporus	View	------------A-TGC-A---TGT-CTA-
Ajellomyces capsulatum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Onygena equina	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Renispora flavissima	View	------------A-TGC-A---TGT-CTA-
Trichophyton rubrum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Uncinocarpus reesii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Ophiostoma stenoceras	View	------------A-TGC-A---TGT-CTA-
Ophiostoma ulmi	View	------------A-TGC-A---TGT-CTA-
Sporothrix schenckii	View	-----------------------GT-CTA-
Diploschistes ocellatus	View	------------------------------
Graphis scripta	View	------------C-CGT-A---GGT-CTA-
Solorina crocea	View	------------A-TGC-A---TGT-CTA-
Nephroma arcticum	View	------------A-TGC-A---TGT-CTA-
Peltigera neopolydactyla	View	------------A-TGC-A---TGT-CTA-
Aleuria aurantia	View	------------------------------
Ascobolus lineolatus	View	------------------------------
Ascodesmis sphaerospora	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Ascozonus woolhopensis	View	----TAA--GCCA-TGC-A---TGT-CTA-
Balsamia magnata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Balsamia vulgaris	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Barssia oregonensis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Boudiera acanthospora	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Caloscypha fulgens	View	-----------CA-TGC-A---TGT-CTA-
Cazia flexiascus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Choiromyces meandriformis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Choiromyces venosus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Cookeina sulcipes	View	------A--GCCA-TGC-A---TGT-CTA-
Desmazierella acicola	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Dingleya verrucosa	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Discina macrospora	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Disciotis venosa	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Fischerula subcaulis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Geopyxis carbonaria	View	-----------CA-TGC-A---TGT-CTA-
Glaziella aurantiaca	View	------------A-TGC-A---TGT-CTA-
Gyromitra esculenta1	View	------------A-TGC-A---TGT-CTA-
Gyromitra esculenta2	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Gyromitra melaleucoides	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Gyromitra montana	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Helvella lacunosa	View	GAT-TAA--GCCA-TGC-A---TGT-GTG-
Hydnotrya cerebriformis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Hydnotrya tulasnei	View	------------A-TGC-A---TGT-CTA-
Byssonectria terrestris	View	------------------------T-CTA-
Labyrinthomyces varius	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Leucangium carthusianum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Microstoma protracta	View	--------------TGC-A---TGT-CTA-
Morchella elata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Morchella esculenta	View	GAT-TAA--GCCA-TGC-A---AGT-CTA-
Otidea leporina	View	------------------------------
Pachyphloeus melanoxanthus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Paurocotylis pila	View	------------A-TGC-A---TGT-CTA-
Peziza badia	View	------------------------------
Peziza quelepidotia	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Peziza succosa	View	------------A-TGC-A---TGT-CTA-
Pseudorhizina californica	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pulvinula archeri	View	-----------CA-TGC-A---TGT-CTA-
Pyronema domesticum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Reddellomyces donkii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Rhizina undulata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Sarcoscypha austriaca	View	------------------------------
Sarcosoma globosum	View	------------------------------
Scutellinia scutellata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Tarzetta catinus	View	------------------------------
Terfezia arenaria	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Terfezia terfezioides	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Thecotheus holmskjoldii	View	-----AA--GCCA-TGC-A---TGT-CTA-
Thelebolus stercoreus	View	---------------GC-G--GAG---TAA
Terichophaea hybrida	View	------------A-TGC-A---TGT-CTA-
Tuber borchii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Tuber excavatum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Tuber gibbosum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Tuber magnatum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Tuber panniferum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Tuber rapaeodorum	View	------------A-TGC-A---TGT-CTA-
Underwoodia columnaris	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Urnula hiemalis	View	------------A-TGC-A---TGT-CTA-
Verpa bohemica	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Verpa conica	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Wilcoxina mikolae	View	-----------CA-TGC-A---TGT-CTA-
Wynnella silvicolor	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Glomerella cingulata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Alternaria alternata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Alternaria brassicae	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Alternaria brassicicola	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Alternaria raphani	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Cochliobolus sativus	View	-----------CA-TGC-A---TGT-CTA-
Leptosphaeria bicolor	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Leptosphaeria doliolum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Leptosphaeria maculans	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Phaeosphaeria microscopica	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Lophiostoma crenatum	View	--------------TGC-A---TGT-CTA-
Monodictys castaneae	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Ophiobolus herpotrichus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pleospora betae	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pleospora herbarum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pleospora rudis	View	------------------------------
Pyrenophora trichostoma	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Pyrenophora tritici-repentis	View	--------------TGC-A---TGT-CTA-
Setosphaeria rostrata	View	------------A-TGC-A---TGT-CTA-
Rhytisma salicinum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Camarops microspora	View	------------------------------
Kionochaeta spissa	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Neurospora crassa	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Podospora anserina	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Sordaria fimicola	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Amylocarpus encephaloides	View	------------------------------
symbiont of Lasioderma serricor	View	GAT-TAA--GCCA-TGC-A---AGT-CTA-
Unidentified	View	-----------------------GT-CTA-
Rhytidhysteron rufulum	View	------------A-TGC-A---TGT-CTA-
Aliquandostipite khaoyaiensis	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Dendrographa leucophaea f. mino	View	------------------------------
Capnodium dematum	View	GAT-TAA--GCCA-TGC-A---TGT--TA-
Aspergillus flavus	View	---------------------------TA-
Aspergillus fumigatus	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Aspergillus terreus	View	----------------------------A-
Eremothecium gossypii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Ajellomyces capsulatus	View	--------------------------CTA-
Gaeumannomyces graminis var. gr	View	------------------------T-ATA-
Metarhizium anisopliae	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Erysiphe orontii	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Phyllactinia guttata	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Calicium adspersum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Meliolina sydowiana	View	GAT-TAG----CA-TGC-A---TGT-CTA-
Meliola niessliana	View	AAG-TAA---CCA-TGC-A---TGT-CTA-
Meliola juddiana	View	TTG-TTA--GCCA-TGC-A---TGT-CTA-
Microsporum audouinii	View	------------------------------
Hypoxylon nummularium	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Helminthosporium velutinum	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-
Helminthosporium solani	View	GAT-TAA--GCCA-TGC-A---TGT-CTA-

Columns

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