Go to search
Citation
Taxa
Matrices
Trees
Analyses
Matrix 38300 of Study 19919
Citation title: "Glycoside hydrolases family 20 (GH20) represent putative virulence factors that are shared by animal pathogenic oomycetes, but are absent in phytopathogens".
Study name: "Glycoside hydrolases family 20 (GH20) represent putative virulence factors that are shared by animal pathogenic oomycetes, but are absent in phytopathogens".
This study is part of submission 19919
(Status: Published).
Matrices
Title: Glycoside hydrolases family 20 Protein Alignment
Description: Sequence alignement used to infer Figure 1
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Streptomyces toyocaensis | (none) | PRFGWRGAMLDVSRHFFSVDEVKRYIDQIA |
| Streptomyces olivaceoviridis | (none) | PRYGWRGAMLDVSRHFFTVDEVKRYIDQLA |
| Streptomyces cyaneogriseus | (none) | PRYAWRGAMLDVARHFFTVDEVKRYIDQIA |
| Trichoderma harzianum Hex2 | (none) | PKYPHRGLLLDVSRHWFEVSDIERTIDALA |
| Beauveria bassiana KGQ03395 | (none) | PKFPHRGMVLDVSRHWFAVEDIKHTIDALA |
| Beauveria bassiana | (none) | PKFPHRGMVLDVSRHWFAVEDIKHTIDALA |
| Magnaporthe grisea | (none) | PLYPHRGILFDTARQWYPVVNLLRTIDAMA |
| Trichoderma harzianum Hex1 | (none) | PKYPHRGIMLDLARNYQTIDDIKRTIDAMS |
| Trichoderma atroviride | (none) | PNYPHRGVMLDLARTYQTVADIKRTIDAMS |
| Entamoeba histolytica Hex1 | (none) | PRFKWRGLMVDPSRNPLSPLMFKRIIDTLA |
| Entamoeba histolytica Hex2 | (none) | PRLQWRGLMIDVARNSFSRSAFVKIINAMA |
| Drosophila melanogaster Hex2 | (none) | PAFSHRGVLLDTARNFVPLKFIRSTLDAMA |
| Drosophila pseudoobscura Hex2 | (none) | PAFPHRGVLLDTSRNFIPLRYLRSTLDAMA |
| Apis mellifera Hex2 | (none) | PTFPYRGLLIDTGRQFFPVERLKRVIDGMA |
| Drosophila melanogaster Hex3 | (none) | PKFRYRGLMLDTSRHFFSVESIKRTIVGMG |
| Drosophila pseudoobscura Hex3 | (none) | PKFRYRGLMLDTSRHFFSVEAIKRTIVGMG |
| Fenneropenaeus chinensis | (none) | PTFPYRGTLLDTSRNFFSVKSIERTLDAMA |
| Anopheles gambiae | (none) | PAFPHRGLALDTSRNFIDLESLRRTLDGMA |
| Drosophila melanogaster Hex1 | (none) | PVYKWRGLLLDTSRNYYSVKSIKRTLEGMA |
| Drosophila pseudoobscura Hex1 | (none) | PKFKWRGLLLDTSRNYYSVKAIKRTLDGMA |
| Bombyx mori Hex1 | (none) | PVYPYRGILLDTARNFYSIDSIKRTIDAMA |
| Manduca sexta | (none) | PVYPYRGILLDTARNYYTIDAIKKTIDAMA |
| Trichoplusia ni | (none) | PTYPYRGILLDTARNYYSIDSIKATIDGMA |
| Choristoneura fumiferana | (none) | PVYPYRGILLDTARNYYTIDSIKKTIDAMA |
| Ostrinia furnacalis | (none) | PVYPYRGILLDTARNYYSIESIKRTIEAMA |
| Aphanomyces astaci | (none) | PAYKYRGVMLDTARNFHSMAAIKRLVRTMG |
| Aphanomyces invadans | (none) | PAFPHRGITLDTSRNFYSIGAIKRVLDGMG |
| Saprolegnia diclina | (none) | PAYSHRGIVLDTSRNYFSIESLRRLIDTMA |
| Achlya hypogyna | (none) | PAYSHRGIVLDTARNYYSIDSLKRLVDTMG |
| Saprolegnia parasitica | (none) | PAYRHRGVVLDTSRQYYSVAAIRRLLDGMG |
| Thraustotheca clavata | (none) | PFYPHRGVSLDTSRQFYSVASIRRLLDGMG |
| Dictyostelium discoideum | (none) | PRYPWRGFMVDSARHYIPKNMILHMIDSLG |
| Blastocystis hominis | (none) | PRFPHRGILMDTSRHFESLPSIKKLIDSMT |
| Lagenidium giganteum | (none) | PRFAHRGLLIDTSRHFLAIPTILRALDSMA |
| Capsaspora owczarzaki | (none) | PRFSHRGLLVDTSRHFEPVPTLKAVIESMS |
| Arabidopsis thaliana Hex 2 | (none) | PRFSYRGLLIDTSRHYLPLPVIKNVIDSMT |
| Oryza sativa Hex3 | (none) | PRFPYRGLLIDTSRHYLPVTVIKKVIDTMA |
| Oryza sativa Hex5 | (none) | PRFPYRGLLIDTSRHYLPVPVIKSVIDSMT |
| Oryza sativa Hex2 | (none) | PRFAFRGLLLDTSRHFLPVDVIKQVIDSMS |
| Arabidopsis thaliana Hex3 | (none) | PRFGYRGLLIDTSRHYLPIDVIKQIIESMS |
| Solanum lycopersicum | (none) | PRFAYRGLLLDTSRHYLPIEIIKQIIESMS |
| Solanum tuberosum | (none) | PRFAYRGLLLDTSRHYLPIEIIKQIIESMS |
| Phaeodactylum tricornutum | (none) | PVYPYRGLMIDTARHFLPLPLILQNLDAME |
| Bombyx mori Hex2 | (none) | PRYAHRGLLVDTSRHYISMSNILLILDAMA |
| Spodoptora frugiperda Hex1 | (none) | PRYTYRGLLIDTSRHYLSVANILKTLDAME |
| Spodoptera frugiperda Hex2 | (none) | PKYTHRGLLVDTSRHYITVPTLLKTLDAME |
| Danio rerio Hex1 | (none) | PRFAFRGLLLDTSRHYLPLHAILKTLDAMA |
| Homo sapiens Hex1 | (none) | PRFPHRGLLLDTSRHYLPLSSILDTLDVMA |
| Pan troglodytes Hex1 | (none) | PRFPHRGLLLDTSRHYLPLSSILDTLDVMA |
| Mus musculus Hex2 | (none) | PRFPHRGVLLDTSRHYLPLSSILDTLDVMA |
| Rattus norvegicus Hex1 | (none) | PRFPHRGILLDTSRHYLPLSSILNTLDVMA |
| Danio rerio Hex2 | (none) | PRFAHRGILLDSSRHFLPLKVILANLEAMA |
| Homo sapiens Hex2 | (none) | PRFSHRGILIDTSRHYLPVKIILKTLDAMA |
| Pan troglodytes Hex2 | (none) | PRFSHRGILIDTSRHYLPVKIILKTLDAMA |
| Mus musculus | (none) | PRFPHRGILIDTSRHFLPVKTILKTLDAMA |
| Rattus norvegicus Hex2 | (none) | PRFPHRGILIDTSRHYLPVKTIFKTLDAMA |
| Apis mellifera Hex1 | (none) | ARLPHRGLLLDTSRHYLPIHDILLTLDAMS |
| Tribolium castaneum | (none) | PRFPHRGFLLDTSRHFEPVRIILQMLDAMA |
| Aedes aegypti | (none) | PRFSHRGLLVDTSRHFVTLCTLIKILDGMA |
| Oriza sativa Hex1 | (none) | PLYPHRGLMLDTGRTYFPVADILRTIDAMA |
| Oriza sativa Hex4 | (none) | PHFTHRGILLDTARNFYPVRDILHTLRAMA |
| Arabidopsis thaliana Hex1 | (none) | PLFGHRGVLLDTSRNYYGVDDIMRTIKAMS |
| Candida albicans | (none) | PNFKHRGLMIDSGRNFLTVDSILEQIDIMA |
| Cordyceps bassiana | (none) | PNYPYRGVMVDSGRNFISVQKLQEQIDGLA |
| Metarhizium anisopliae | (none) | PNYPYRGVMVDTGRNFISANKIKEQIDGLA |
| Neotyphodium sp. | (none) | PKYPYRGVMVDTGRNFISVSKIKEQIDGLA |
| Coccidiodes posadasii | (none) | PLYPVRGIMIDTARNFISVKKIFEQLDGMA |
| Aspergillus nidulans | (none) | PLYPYRGLMVDTGRNFISVRKLHEQLDGMA |
| Aspergillus oryzae | (none) | PLYPYRGIMLDTGRNFVSLPKIFEQLEGMS |
Columns
None of the columns has a description.
