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Citation
Taxa
Matrices
Trees
Analyses
Matrix 3111 of Study 2018
Citation title: "Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras - Sporothrix schenckii complex".
This study was previously identified under the legacy study ID S2010
(Status: Published).
Matrices
Title: ITS
Description: Legacy TreeBASE Matrix ID = M3751
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Ophiostoma africanum DQ316197 | (none) | ?????????????????????????????? |
| Ophiostoma africanum DQ316200 | (none) | ?????????????????????????????? |
| Ophiostoma aurorae CMW19362 | (none) | TCATTACAGAG-TTTAAAAACTCCCAACCC |
| Ophiostoma aurorae CMW19363 | (none) | TCATTACAGAG-TTTAAAAACTCCCAACCC |
| Ophiostoma dentifundum AY495434 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Ophiostoma dentifundum AY495435 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Ophiostoma fusiforme AY280481 T | (none) | TCATTACAGAGTTTTCTAAACTCCCAACCC |
| Ophiostoma fusiforme AY280484 | (none) | TCATTACAGAGTTTTCTAAACTCCCAACCC |
| Ophiostoma lunatum AY280485 T | (none) | TCATTACAGAGTTTTCTAAACTCCCAACCC |
| Ophiostoma lunatum AY280486 | (none) | TCATTACAGAGTTTTCTAAACTCCCAACCC |
| Ophiostoma nigrocarpum AY280489 | (none) | TCATTACCGAGTTCCAGCAACTCCCAACCC |
| Ophiostoma nigrocarpum AY280490 | (none) | TCATTACCGAGTTCCAGCAACTCCCAACCC |
| Ophiostoma palmaculminatum DQ316191 | (none) | ?????????????????????????????? |
| Ophiostoma palmaculminatum DQ316192 | (none) | ?????????????????????????????? |
| Ophiostoma phasma DQ316219 | (none) | ?????????????????????????????? |
| Ophiostoma phasma DQ316222 | (none) | ?????????????????????????????? |
| Ophiostoma protearum DQ316201 | (none) | ?????????????????????????????? |
| Ophiostoma protearum DQ316203 | (none) | ?????????????????????????????? |
| Ophiostoma splendens DQ316205 | (none) | ?????????????????????????????? |
| Ophiostoma splendens DQ316215 | (none) | ?????????????????????????????? |
| Ophiostoma stenoceras AF484459 | (none) | TCATTACAGAGTTTTCTAAACTCCCAACCC |
| Ophiostoma stenoceras AF484462 T | (none) | TCATTACAGAGTTTTCTAAACTCCCAACCC |
| Sporothrix albicans CBS302.73 T | (none) | ---????????--????????????????? |
| Sporothrix humicola AF484471 | (none) | TCATTACAGAG--TTACAAAACTCCAACCC |
| Sporothrix humicola AF484472 | (none) | TCATTACAGAG--TTACAAAACTCCAACCC |
| Sporothrix inflata AY495426 T | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix inflata AY495431 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix lignivora CMW18597 | (none) | TCATTACTGAGTTCTAGCAACTCCCAACCC |
| Sporothrix lignivora CMW18598 | (none) | TCATTACTGAGTTCTAGCAACTCCCAACCC |
| Sporothrix lignivora CMW18599 | (none) | TCATTACTGAGTTCTAGCAACTCCCAACCC |
| Sporothrix lignivora CMW18600 | (none) | TCATTACTGAGTTCTAGCAACTCCCAACCC |
| Sporothrix lignivora CMW18601 | (none) | TCATTACTGAGTTCTAGCAACTCCCAACCC |
| Sporothrix nivea CBS150.87 | (none) | ???????????--????????????????? |
| Sporothrix pallida CBS131.56 | (none) | TCATTACAGAG--TTACAGAAC????ACCC |
| Sporothrix pallida CBS182.63 | (none) | ???????????--????????????????? |
| Sporothrix schenckii AB089139 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122038 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122039 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122041 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122042 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122046 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122047 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122048 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB122050 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB128000 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB128002 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB128004 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB128005 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB128006 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AB128010 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii AF484467 | (none) | TCATTACAGAGTTTTCACAACTCCCAACCC |
| Sporothrix schenckii v. luriei AB128012 | (none) | TCATTACCGAGTTCTCACGACTCCCAACCC |
| Sporothrix stylites AF484468 | (none) | TCATTACAGAG--TTACAAAACTCCAACCC |
| Sporothrix stylites CMW14541 | (none) | TCATTACAGAG--TTACAGAACTCC?ACCC |
| Sporothrix stylites CMW14542 | (none) | ???????????--TTACAAAACTCCAATCC |
| Sporothrix stylites CMW14543 T | (none) | TCATTACAGAG--TTACAGAACTTCAACCC |
| Sporothrix stylites CMW14544 | (none) | TCATTACAGAG--TTACAGAACTTCAACCC |
Columns
None of the columns has a description.
