CiteULike CiteULike
Delicious Delicious
Connotea Connotea

Matrix 3164 of Study 2044

About Citation title: "Phylogeny and intraspecific variability of holoparasitic Orobanche (Orobanchaceae) inferred from plastid rbcL sequences".
About This study was previously identified under the legacy study ID S2043 (Status: Published).

Matrices

Title: rbcL nucleotide and indels

Description: Legacy TreeBASE Matrix ID = M3826

Rows

Taxon Label Row Segments Characters 1?–30
Orobanche artemisiae campestris  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche minor 3  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche minor 1  (none) ????????????TGTTAAAGAGTACAAATT
Orobanche crenata  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche amethystea 2  (none) ????????????TGTTAAAGAGTACAAATT
Orobanche hederae 2  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche hederae 3  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche amethystea 1  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche hederae 1  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche pubescens  (none) ATTC?AAGCGGGTGTTAAAGAGTACAAATT
Orobanche teucrii  (none) ????????CGGGTATTAAAGAGTACAAATT
Tozzia alpina  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Harveya purpurea  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Harveya squamosa  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Bartsia alpina  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Buchnera floridana  (none) ATTCAAAGCAGGTGTTAAAGAGTACAAATT
Pedicularis foliosa  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Castilleja linariifolia  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Seymeria pectinata  (none) ATTCAAAGCGGGTGTTAAGGAGTACAAATT
Melampyrum lineare  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Lathraea clandestina  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAACT
Lindenbergia philippinensis  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Lindenbergia sp  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche lutea  (none) ????????????TATTAAAGAGTACAAATT
Orobanche rapum genistae 2  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche fasciculata  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAACT
Hyobanche sanguinea  (none) ATTCAAAGCGGGTGTTAAGGAGTACAAATT
Hyobanche atropurpurea  (none) ATTCAAAGCGGGTGTTAAGGAGTAAAAATT
Cycnium racemosum  (none) ATTCAAA??GGGTGTTAAAGAGTACAAATT
Alectra sessiliflora  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Alectra orobanchoides  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Striga gesnerioides  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Striga asiatica  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Cistanche phelypaea 2  (none) ????AAGGCGGGTGTTAAAGAATACAAATT
Cistanche phelypaea 1  (none) ????AAGGCGGGTGTTAAAGAATACAAATT
Boschniakia hookeri 2  (none) ?????????GGGTGTTAATGAGTAAAAATT
Boschniakia strobilacea  (none) ATTCAAAGCGGGTGTTAATGAGTAAAAATT
Boschniakia hookeri 1  (none) ???????????????????GAGTAAAAATT
Orobanche alsatica  (none) ????AAAGCGGGTGTTAAAGAGTATAAATT
Orobanche bartlingii  (none) ?????????GGGTGTTAAAGAGTACAAATT
Orobanche caryophyllacea  (none) ????AAAGCGGGTATTAAAGAGTACAAATT
Orobanche aconiti lycoctoni  (none) ATTCAAAGTGGGTGTTAAAGAGTACAAATT
Orobanche ramosa  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche gracilis  (none) ATTAAAA?CGGGTGTTAAAGAGTACAAATT
Orobanche nana 2  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche nana 1  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche mutelii  (none) ?TTCAAAGCGGGTGTTAAAGAGTACCAATT
Orobanche spec nov  (none) ????????CGGGTGTTAAAGAGTACAAATT
Orobanche minor 4  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche minor 5  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche minor 2  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche cf gracilis  (none) ????????????CGTTAAAGAGTACAAATT
Orobanche rapum genistae 1  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche rigens 2  (none) ?TTC?AAGCGGGTGTTAAAGAGTACAAATT
Orobanche rigens 1  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAATT
Orobanche coerulescens  (none) ????????????TGTTAAAGAGTACAAATT
Orobanche cernua  (none) ATTCAAAG----------------------
Orobanche cumana  (none) ATTCAAAG----------------------
Orobanche cernua cernua  (none) ATTCAAAG----------------------
Orobanche cernua australiana  (none) ATTCAAAG----------------------
Orobanche tunetana  (none) ????AAAGCGGGTGTTAAAGAGTACAAATT
Orobanche transcaucasica  (none) ????AAAGCGGGTGTTAAAGAGTACAAATT
Orobanche californica  (none) ????????????TGTTAAAGAGTACAAACT
Orobanche corymbosa 2  (none) ATTCAAAGCGGGTGTTAAAGAGTACAAACT
Orobanche corymbosa 1  (none) ????????????TGTTAAAGAGTACAAACT
Orobanche uniflora  (none) ????????????TGTTAAAGAGTACAAACT

Columns

None of the columns has a description.