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Matrix 3168 of Study 2048

About Citation title: "Phylogenetic relationships of glassfrogs (Centrolenidae) based on mitochondrial and nuclear genes".
About This study was previously identified under the legacy study ID S2047 (Status: Published).

Matrices

Title: Nuclear Dataset

Description: Legacy TreeBASE Matrix ID = M3830

Rows

Taxon Label Row Segments Characters 1?–30
Hyalinobatrachium chirripoi UCR 17424  (none) AAAAAGGGCAAAGCCACTAGCGAAGAGCGG
Hyalinobatrachium cf pellucidum QCAZ 29438  (none) AAAAAGGGCAAAGCCACTAGCGA{AG}GAG
Hyalinobatrachium cf pallidum MHNLS 17881  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium cf munozorum QCAZ 31056  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium aff munozorum CBG 1099  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium aff ignioculus SMNS 12251  (none) -------------CCACTAGTGAAGAACGA
Hyalinobatrachium aff bergeri MTDD 46305  (none) AAAAAGGGCAAAGCCACTAGCGAAGAGCGA
Hyalinobatrachium bergeri MHNC 5676  (none) -------------CCACTAGCGAAGAGCGA
Centrolene hesperium MHNSM 25802  (none) ------GGCAAAGCCACCATTGAAGAACGA
Centrolene notostictum MAR 510  (none) ------GGCAAAGCCACCATTGAAGAACGA
Centrolene antioquiense NRPS 014  (none) ------GGCAAAGCCACCATTGAAGAACGA
Cochranella puyoensis DFCH USFQ D285  (none) ------GGCAAAGCCACCAAGGAAGAACGA
Centrolene tayrona MAR 546  (none) ------GGCAAAGCCACCAACGAAGAACGA
Centrolene tayrona MAR 545  (none) ------GGCAAAGCCACCAACGAAGAACGA
Centrolene tayrona MAR 544  (none) ------GGCAAAGCCACCAACGAAGAACGA
Hyalinobatrachium aff mondolfii MB 260  (none) -------------CCACCAGCGAAGAACGA
Oreobates quixensis  (none) ------------------------------
Hyalinobatrachium aff iaspidiense MB 247  (none) -------------CCACCAGCGAAGAACGA
Cochranella cf amelie MHNC 5646  (none) -------------CCACCAATGAAGAACGA
Cochranella oyampiensis MB 165  (none) -------------CCACCAATGAAGAACGA
Xenopus laevis  (none) AAAAACCTCAGTGCCACCAAAGAAGAGAAA
Telmatobius truebae  (none) AAAAATGCCAAAGCCACCAAAGAAGAACGT
Stefania evansi  (none) AAAAAATCCAAAGCCACCAAAGAAGAACAA
Sphaenorhynchus lacteus  (none) -------------CACCTGTGGAAGAAAGA
Spea bombifrons  (none) ------------------------------
Smilisca fodiens  (none) ------------------------------
Scinax crospedospilus  (none) ------------------------------
Scarthyla goinorum  (none) -------------CCCCCTTGGAAGAACGA
Pseudis paradoxa  (none) AAAAACGGCAAAGCCCCCATGGAAGAACGA
Pristimantis curtipes  (none) AAAAATGGCAAAGCCCCAATTGAAGAGCGT
Physalaemus cuvieri  (none) ----------CCCCCACCGAAGAGAGA---
Phyllomedusa tomopterna  (none) -------------CCACTGTAGAAGAACGA
Nymphargus wileyi QCAZ 27435  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Cochranella vozmedianoi MHNLS 17877  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Nymphargus siren KU 179171  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus rosada MHUA 4308  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus posadae QCAZ 26023  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus pluvialis KU 173224  (none) AAAAAGGGCAAAGCCACCAAGGAGGAACGA
Nymphargus mixomaculata MTD 45200  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus megacheira KU 143272  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus griffithsi QCAZ 31768  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus cochranae QCAZ 31113  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus aff posadae AVV 119  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Nymphargus aff cochranae QCAZ 31340  (none) AAAAAGGGCAAAGCGACCAAGGAAGAACGA
Nymphargus bejaranoi CBG 1488  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Litoria manya  (none) ------------------------------
Lithobates catesbeianus  (none) ------------------------------
Leptodactylus didymus  (none) ------------------------------
Lepidobatrachus laevis  (none) AAAAATTCCAAAGCCACCAAAGAAGAACAA
Hypsiboas boans  (none) ------------------------------
Hyloxalus nexipus  (none) AAACATGCCAAAGCCACCAATGAAGAACGA
Hyla cinerea  (none) AAAAACGGCAAAGCTCCCGTAGAAGAACGG
Hemiphractus proboscideus  (none) AAAAATTCCAAAGCTACCAAAGAAGAACAA
Hyalinobatrachium vireovittatum CH 5330  (none) AAAAAGGGCAAAGCCACTAGCGAAGAGCGA
Hyalinobatrachium valerioi UCR 17418  (none) AAAAAGGGCAAAGCCACTAGCGAAGAACGA
Hyalinobatrachium taylori MHNLS 17141  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium tatayoi MHNLS 17174  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium sp MIZA 317  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium pulveratum USNM 538588  (none) AAAAAGGGCAAAGCCACTAAAGAAGAACGA
Hyalinobatrachium pallidum MHNLS 17238  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium orocostale MHNLS 17247  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium orientale MHNLS 17878  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium nouraguensis SNMS 12247  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium mondolfii MHNLS 17119  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium ignioculus BPN 1315  (none) AAAAAGGGCAAAGCCACTAGTGAAGAACGA
Hyalinobatrachium ibama MAR 503  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium iaspidiense MHNLS 17126  (none) -------------CTACCAGCGAAGAACGA
Hyalinobatrachium fragile MHNLS 17161  (none) -------------CCACCAGCGAAGAACGA
Hyalinobatrachium fleischmanni USNM 559092  (none) AAAAAGGGCAA{AG}GCCACCAGCGAAGAA
Hyalinobatrachium fleischmanni QCAZ 22303  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium eurygnathum CFBH 5729  (none) -------------CCACCAATGAAGAACGA
Hyalinobatrachium eccentricum MHNLS 17335  (none) -------------CCACTAGTGAAGAACGA
Hyalinobatrachium duranti MHNLS 16493  (none) AAAAAGGGCAAAGCCACCAGCGAAGAACGA
Hyalinobatrachium crurufasciatum MHNLS 16475  (none) AAAAAGGGCAAAGCCACTAGTGAAGAACGA
Hyalinobatrachium colymbiphyllum UCR 17423  (none) AAAAAGGGCAAAGCCACTAGCGAAGAGCGA
Hyalinobatrachium chirripoi USNM 538586  (none) AAAAAGGGCAAAGCCACTAGCGAAGAGCGA
Hyalinobatrachium aureoguttatum QCAZ 32105  (none) AAAAAGGGCAAAGCCACT{AG}GCGAAGAA
Hyalinobatrachium antisthenesi MHNLS 17909  (none) AAAAAGGGCAAAGTCACCAATGAAGAACGA
Gastrotheca marsupiata  (none) ?????????????CCACCAAAGAAGAACAA
Gastrophryne carolinensis  (none) ------------------------------
Flectonotus fitzgeraldi  (none) AAAAATTCTAAAGCCACCAAAGAAGAACAA
Duellmanohyla soralia  (none) -------------CTCCCGTAGAAGAACGA
Dendropsophus nanus  (none) -------------CCCCTGTAGAAGAAAGA
Dendrophryniscus minutus  (none) AAAAATGCCAAAGCCACCAAAGAAGAACGA
Cochranella susatamai MAR 337  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella spinosa USNM 538863  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella spiculata MHNSM 24867  (none) AAAAAGGGCAAAGCCACCAATGAAGAGCGA
Cochranella sp CBG 1096  (none) -------------CCACCAAGGAAGAACGA
Cochranella savagei MHUA 4094  (none) AAAAAGGGCAAAGCCACCATTGAAGAACGA
Cochranella revocata MHNLS 17319  (none) -------------CAACCAGCGAAGAACGA
Cochranella punctulata MHUA 4071  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella nola CBG 814  (none) -------------CCACCAAGGAAGAACGA
Cochranella nola CBG 1094  (none) -------------CCACCAAGGAAGAACGA
Cochranella midas  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella mache QCAZ 27747  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella helenae MHNLS 17139  (none) AAAAAGGGCAAACCCACCAATGAAGAACGA
Cochranella helenae MHNLS 17128  (none) -------------CCACCAATGAAGAACGA
Cochranella granulosa USNM 559082  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella flavopunctata QCAZ 32265  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella euknemos CH 5109  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella daidalea MHUA 3271  (none) AAAAAGGGCAAAGCCACC{AG}TTGAAGAA
Cochranella castroviejoi MHNLS 16446  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella albomaculata USNM 534151  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Cochranella cf spiculata CBG 806  (none) -------------CCACCAATGAAGAACGA
Cochranella adiazeta MAR 483  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Ceratophrys cornuta  (none) AAAAATTCAAAAGCCACCAAAGAAGAACAG
Centrolene venezuelense  (none) -AAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene sp MHUA 4099  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Centrolene prosoblepon  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Centrolene pipilatum KU 178154  (none) -AAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene peristictum QCAZ 22312  (none) AAAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene gorzulai BPN 1193  (none) AAAAAGGGCAAAGCCTCCAATGAAGAACGA
Centrolene mariaelenae QCAZ 31729  (none) AAAAAGGGCAAAGCCACCAAAGAAGAACGA
Centrolene litorale QCAZ 27693  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Centrolene lema KU 181128  (none) AAAAAGGGCAAAGCCTCCAATGAAGAACGA
Centrolene ilex UCR 16861  (none) AAAAAGGGCAAAGCCACCAATGATGAACGA
Centrolene hybrida MAR 347  (none) AAAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene grandisonae QCAZ 22310  (none) AAAAAGGGCAAAGCCACCAAGGAAGAACGA
Centrolene gorzulai MHNLS 1603  (none) AAAAAGGGCAAAGCCTCCAATGAAGAACGA
Centrolene geckoideum KU 17801  (none) AAAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene callistommum QCAZ 28555  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Centrolene aff buckleyi MAR 371  (none) AAAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene buckleyi KU 178031  (none) ------------------------------
Centrolene bacatum QCAZ 22728  (none) AAAAAGGGCAAAGCCACCATTGAAGAACGA
Centrolene andinum JMG 366  (none) AAAAAGGGCAAAGCCACCAATGAAGAACGA
Centrolene altitudinale  (none) -------------CCACCATTGAAGAACGA
Caudiverbera caudiverbera  (none) ------------------------------
Atelopus peruensis  (none) ------------------------------
Anotheca spinosa  (none) ------------------------------
Allophryne ruthveni  (none) AAAAAGGGCAAAGCCACCAGAGAAGAACGA
Allobates trilineatus  (none) AAAAACGGCAAAGCTCCC{AG}TAGAAGAA
Agalychnis spurrelli  (none) ------------------------------
Acris crepitans  (none) ------------------------------

Columns

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