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Matrix 3209 of Study 2068

About Citation title: "Phylogenetic placement of the enigmatic parasite, Polypodium hydriforme, within the Phylum Cnidaria".
About This study was previously identified under the legacy study ID S2067 (Status: Published).

Matrices

Title: 18S rDNA

Description: Legacy TreeBASE Matrix ID = M3871

Rows

Taxon Label Row Segments Characters 1?–30
Abietinaria filicula 91608  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Adelopora crassilabrum ALst51  (none) ------------------------------
Agalma elegans AY937313  (none) --------------AGTCATATGCTTGTCT
Aglaophenia tubiformis 81766  (none) -----------AGTAGTCATATGCTTGTCT
Amphiporus sp. AF119077  (none) ----------------TCATATGCTTGTCT
Amphisbetia minima 91629  (none) ------------------------------
Anthohebella parasitica 85034  (none) -TGATCCTGCCAGTAGTCATATGCTTGTCT
Antipathes galapagensis  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Apolemia sp CWD101 AY937331  (none) --------------AGTCATATGCTTGTCT
Atolla vanhoeffeni AF100942  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Aurelia sp. Ephyra AGC170 18S  (none) ------------------------------
Balano sp.  (none) ??????????????????????????????
Beroe ovata AF293694  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Bimeria vestita 92014  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Bougainvillia carolinensis 91705  (none) ----------CAGTAGTCATATGC-TGTCT
Brinckmannia hexactinellidophila 92074  (none) ---ATCCTGCCAGTAGTCATATGCTTGTCT
Buddenbrockia plumatellae 68655311  (none) ------------------------------
Caenorhabditis elegans X03680  (none) TTGATTCTGTCAGC-GCGATATGCTCAAGT
Candelabrum cocksii AY920758  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Candida albicans  (none) ??????????????????????????????
Carybdea rastonii AF358108  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Tripedalia MND094  (none) ------------------------------
Turritopsis dohrnii 91981  (none) ??????????????????????????????
Urechis caupo AF342805  (none) ??????????????????????????????
Velella sp AF358087  (none) ??????????????????????????????
Zanclea prolifera 92681  (none) ??????????????????????????????
Zyzzyzus calderi 92083  (none) ??????????????????????????????
Catostylus sp.  (none) ------------------------------
Cephalodiscus gracilis  (none) ??????????????????????????????
Chironex fleckeri AF358104  (none) ----------------AAGCTTGCTTGTCT
Chiropsalmus sp AF358103  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Chordodes morgani  (none) ??????????????????????????????
Chrysaora melanaster AF358099  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Cladocoryne floccosa 92247  (none) ------------------------------
Clava multicornis 91965  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Clavactinia gallensis 96191  (none) -TGATCCTGCCAGTAGTCATATGCTTGTCT
Clytia noliformis 92240  (none) --GATCCTGCCAGTAGTCATATGCTTGTCT
Cordagalma cordiforme AY937317  (none) --------------AGTCATATGCTTGTCT
Cordylophora caspia 92133  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Corydendrium sp. 92000  (none) ------------------------------
Craterolophus convolvulus AY845344  (none) -------------TAGTCATATGCTTGTCT
Crypthelia cryptotrema ALst11  (none) ----------------------TGCTTGTC
Darwin carybdeid sp AF358105  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Diclidophora denticulata  (none) ??????????????????????????????
Dicoryne conybearei 92128  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Dipurena ophiogaster 92472  (none) ------------------------------
Ectopleura dumortieri 91691  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Eudendrium racemosum 85266  (none) ------------------------------
Euphysora bigelowi 92365  (none) ------------------------------
Fabienna sphaerica AY920767  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Garveia sp. AY920766  (none) -------------------TATGCTTGTCT
Halecium muricatum 82344  (none) ------------------------------
Haliclystus octoradiatus AY845346  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Haliclystus sanjuanensis AF358102  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Halistemma rubrum AY937358  (none) --------------AGTCATATGCTTGTCT
Halopteris minuta 91651  (none) -------------------------TGT{C
Harrimania sp.  (none) ??????????????????????????????
Hydra circumcincta AF358080  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Hydractinia symbiolongicarpus hysy  (none) ------------------------------
Hydrichthella epigorgia 92719  (none) ------------------------------
Hydrichthys boycei 92095  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Koellikerina fasciculate 92173  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Kudoa trifolia AM183300  (none) -------TGCCAGTGGTCATATGCTCGTCT
Kudoa unicapsula AM490334  (none) ------------------------------
Lepidopora microstylus ALst96  (none) ------------------------------
Leuckartiara octona 92078  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Leucosolenia sp AF100945  (none) ----------------TGATATGCTCGTCT
Limnocnida tanganyicae AY920755  (none) --GATCCTGCCAGTAGTCATATGCTTGTCT
Limulus polyphemus U91490  (none) --GATCCTGCCAGTAGTCATATGCTTGTTT
Lizzia blondina 92167  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Meara stichopi  (none) ??????????????????????????????
Melicertum octocostatum AY920757  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Milnesium tardigradum U49909  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Mnemiopsis leidyi AF293700  (none) TTGATCCTGCTTGTAGTCATATGCTTGTCT
Moerisia sp AF358083  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Monosiga brevicollis AF084618  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Montastraea franksi  (none) ??????????????????????????????
Mucor racemosus  (none) ??????????????????????????????
Mycale fibrexilis  (none) ??????????????????????????????
Myxobolus dogieli 152013653  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Myxobolus EF370481  (none) --------------AGATATACGCTTTTCT
Nanomia bijuga AY937338  (none) --------------AGTCATATGCTTGTCT
Nausithoe rubra AF358095  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Nectopyramis sp.  (none) ??????????????????????????????
Octophialucium indicum 82205  (none) ---GTCCTGCCAGTAGTCATATGCTTGTCT
Olindias phosphorica AY920753  (none) ---------CCAGTAGTCATATGCTTGTCT
Oncorhynchus kisutch AF030250  (none) --------------AG-CATATGCTTGTCT
Pachycordyle pusilla 92101  (none) --GATCCTGCCAGTAGTCATATGCTTGTCT
Pandea sp AY920765  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Parvicapsula limandae 149133674  (none) TTGATCCTGCCAGTAG-CATATGCTTGTCT
Parvicardium minimum DQ279942  (none) ----------------TTATATGCTTGTCT
Pennaria disticha AY920762  (none) --------------AGTCATATGCTTGTCT
Peripatus sp. AY210837  (none) --------------AGTCATATGCTTGTCT
Petromyzon marinus  (none) ??????????????????????????????
Phacellophora camtschatica AF358096  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Phascolopsis gouldii  (none) ??????????????????????????????
Phoronis vancouverens  (none) ??????????????????????????????
Physophora hydrostatica AY937342  (none) --------------AGTCATATGCTTGTCT
Placopecten magellanicus X53899  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Pleurobrachia bachei AF293677  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Plumularia setacea 85056  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Podocoryne carnea AF358092  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Polyorchis penicillatus AF358090  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Polypodium NA 18s PF13  (none) ------------------------------
Polypodium Russia Lindner  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Porpita sp. AF358086  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Priapulus caudatus Z38009  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Proboscidactyla ornate 92017  (none) ---------------GTCATATGCTTGTCT
Proceraea cornuta  (none) ??????????????????????????????
Pruvotella grisea 91999T  (none) -----CCTGCCAGTAGTCATATGCTTGTCT
Pseudocrypthelia pachypoma ALst72  (none) ------------------------------
Ptychodera flava AF278681  (none) --------------AGTCATATGCTTGTCT
Pycnophyes sp. Tjarno AY859598  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Raja schmidt  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Ralpharia gorgoniae 92092  (none) ------------------------------
Rathkea octopunctata 92298  (none) ------------------------------
Rhizogeton nudus 91626  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Saccharomyces cerevisiae  (none) ------------------------------
Saccoglossus kowalevskii  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Salpingoeca infusionum AF100941  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Scrippsia pacifica AF358091  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Solanderia ericopsis 85041  (none) ATGATCCTGCCAGTAGTCATATGCTTGTCT
Stenostomum leucops  (none) ??????????????????????????????
Strongylocentrotus purpuratus  (none) ??????????????????????????????
Styela plicata L12444  (none) ------------------------------
Stylochus zebra AF342801  (none) --------------AGTCATATGCTTGTCT
Suberites ficus  (none) ??????????????????????????????
Sulculeolaria quadrivalvis AY937353  (none) --------------AGTCATATGCTTGTCT
Tenebrio molitor X07801  (none) ----TCCTGCCAGTAGTCATATGCTTGTCT
Thalia democratica  (none) --------------AGTCATATGCTTGTCT
Triakis semifasciata AF212180  (none) TTGATCCTGCCAGTAGTCATATGCTTGTCT
Tricho matsut  (none) ------------------------------

Columns

None of the columns has a description.