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Citation
Taxa
Matrices
Trees
Analyses
Matrix 3244 of Study 2108
Citation title: "A Phylogenomic study of birds reveals their evolutionary history".
This study was previously identified under the legacy study ID S2079
(Status: Published).
Matrices
Title: EEF2
Description: Legacy TreeBASE Matrix ID = M3909
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Oceanodroma tethys | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Opisthocomus hoazin | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGTT |
| Otidiphaps nobilis | (none) | AAAGTTTGCTGCCAAGGGTGATTCCCAGAT |
| Oxyura jamaicensis | (none) | ???GTTTGCTGCCAAGGGTGACGCCCAGCT |
| Pandion haliaetus | (none) | AAAGTTCGCTGCCAAAGGTGATGCCCAGCT |
| Passer montanus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Pedionomus torquatus | (none) | AAAGTTTGCTGCTAAGGGTGATGCCCAGCT |
| Pelecanoides urinatrix | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Pelecanus occidentalis | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Phaenicophaeus curvirostris | (none) | ???GTTTGCTGCCAAGGGTGATGCCC??CT |
| Phaethon lepturus | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Phaethon rubricauda | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Phaethornis griseogularis | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Phalacrocorax carbo | (none) | AAAGTTTGCTGCTAAGGGTGATGCCCAGCT |
| Pharomachrus auriceps | (none) | AAAGTTTGCTGCCAAGGGAGATGCTCAGCT |
| Phegornis mitchellii | (none) | TAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Phodilus badius | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Phoenicopterus chilensis | (none) | AAAGTTTGCCGCCAAGGGTGATGCCCAGCT |
| Phoeniculus purpureus | (none) | AAAGTTTGCTGCTAAGGGAGATGCCCAGCT |
| Picathartes gymnocephalus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Pipra coronata | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Pitta guajana | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Platycercus elegans | (none) | ?????????????????????????????? |
| Ploceus cucullatus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Podargus strigoides | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Podiceps auritus | (none) | AAAGTTTGCTGCTAAAGGTGATGCCCAGCT |
| Psittacula alexandri | (none) | AAAGTTCGCTGCCAAGGGGGATGCCCAGCT |
| Psittacus erithacus | (none) | AAAGTTCGCTGCCAAAGGGGAAGCCCAGCT |
| Psophia crepitans | (none) | AAAGTTTGCTGCTAAGGGTGATGCGCAGCT |
| Pterocles namaqua | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Puffinus griseus | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Rallus limicola | (none) | AAAGTTTGCTGCCAAAGGTGAATCCCAGCT |
| Regulus calendula | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Rhea americana | (none) | AAAGTTTGCTGCCAAGGGTGAGGCCCAACT |
| Rhynochetos jubatus | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Rollulus rouloul | (none) | AAAGTTTGCTGCTAAGGGTGATGCCCAGAT |
| Rostratula benghalensis | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Sagittarius serpentarius | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Sapayoa aenigma | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Sarcoramphus papa | (none) | ?????????????????GTGATGCCCAGCT |
| Sarothrura elegans | (none) | CAAGTTTGCTGCTAAGGGAGATGGCCAGCT |
| Scopus umbretta | (none) | AAAGTTCGCCGCCAAGGGTGATGCCCAGCT |
| Scytalopus magellanicus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Smithornis rufolateralis | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Speotyto cunicularia | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Steatornis caripensis | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Streptoprocne zonaris | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Strix occidentalis | (none) | ??????TGCTGC??AGGGTGATGCCCAGCT |
| Struthio camelus | (none) | AAAGTTCGCTGCCAAGGGTGAGGCCCAACT |
| Sylvia nana | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Syrrhaptes paradoxus | (none) | ????TTCGCTGCCAAGGGTGATG???AGCT |
| Tauraco erythrolophus | (none) | AAAGTTTGCTGCGAAGGGGGATGCCCAGCT |
| Thamnophilus nigrocinereus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Thinocorus orbignyianus | (none) | AAAGTTTGCTGCTAAGGGTGATGCTCAGCT |
| Tinamus guttatus | (none) | AAAGTTTGCTGCCAAGGGTGAGGCTCAGCT |
| Tockus camurus | (none) | AAAGTTTGCAGCCAAGGGAGACGCACAGCT |
| Todus angustirostris | (none) | ?????????????????????????????? |
| Treron vernans | (none) | AAAGTTTGCTGCCAAGGGTGATTCCCAGAT |
| Trogon personatus | (none) | AAAGTTCGCTGCCAAGGGAGATGCGCAGCT |
| Turdus falklandii | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Turnix sylvatica | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Tyrannus tyrannus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Tyto alba | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Upupa epops | (none) | AAAGTTCGCTGCTAAGGGAGACGCTCAGCT |
| Urocolius indicus | (none) | AAAGTTTGCTGCCAAGGGCGAGGCCCAGCT |
| Vidua chalybeata | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Alligator mississippiensis | (none) | ?????????????????????????????? |
| Gavialis gangeticus | (none) | ?????????????????????????????? |
| Acanthisitta chloris | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAG{A |
| Aegotheles insignis | (none) | AAAGTTTGCTGCCAAGGGGGACGCCCAGCT |
| Aerodramus vanikorensis | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Alcedo leucogaster | (none) | ?????????????????????????????T |
| Alectura lathami | (none) | GAA-TTTGCTGCCAAGGGTGATGCCCAGCT |
| Alisterus scapularis | (none) | AAAGTTCGCTGCCAAGGGGGATGCCCAGCT |
| Anas platyrhynchos | (none) | AAAGTTTGCTGCCAAGGGTGACGCCCAGCT |
| Anhinga anhinga | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAACT |
| Anser erythropus | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGAT |
| Anseranas semipalmata | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Apteryx australis | (none) | AAAGTTTGCTGCCAAGGGTGAGGCCCAACT |
| Aramus guarauna | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Ardea herodias | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Arenaria interpres | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Aythya americana | (none) | AAAGTTTGCTGCCAAGGGTGACGCCCAGCT |
| Balaeniceps rex | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Batrachostomus septimus | (none) | ??AGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Biziura lobata | (none) | ??????????????AGGGGGATGCCCAGCT |
| Bombycilla garrulus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Brachypteracias squamigera | (none) | AAAGTTTGCTGCCAAGGGTGATGCTCAGCT |
| Bucco macrodactylus | (none) | ?????????????????????TGCCCAGAT |
| Bucorvus abyssinicus | (none) | AAAGTTCGCGGCCAAGGGAGATGCCCAGCT |
| Burhinus bistriatus | (none) | ?????????????????????????????? |
| Buteo jamaicensis | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Cacatua sulphurea | (none) | AAAGTTCGCTGCAAAGGGGGATGCCCAGCT |
| Capito niger | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGAT |
| Caprimulgus longirostris | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAACT |
| Cariama cristata | (none) | AAAGTTTGCGGCCAAGGGTGAGGCCCAACT |
| Casuarius casuarius | (none) | GAAGTTCGCTGCCAAGGGTGAGGCCCAACT |
| Cathartes aura | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Centropus viridis | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Chalcopsitta cardinalis | (none) | AAAGTTCGCTGCCAAGGGGGATGCCCAGCT |
| Charadrius vociferus | (none) | AAAGTTTGCTGCGAAGGGTGATGCCCAGCT |
| Chauna torquata | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Choriotis kori | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Ciconia ciconia | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Climacteris erythrops | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Coccyzus americanus | (none) | TAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Cochlearius cochlearius | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Colibri coruscans | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Colinus cristatus | (none) | GAAGTTTGCTGCCAAGGGCGATGCCCAGAT |
| Colius colius | (none) | GAAGTTCGCTGCCAAGGGAGAAGCCCAGCT |
| Columba livia | (none) | AAAGTTTGCTGCCAAGGGTGATTCCCAGAT |
| Columbina passerina | (none) | GAAGTTTGCTGCCAAGGGTGATTCCCAGAT |
| Coracias caudata | (none) | AAAGTTTGCTGCTAAGGGTGATGCCCAGCT |
| Corvus corone | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Corythaeola cristata | (none) | AATGTTCGCTGCTAAGGGTGATGCCCAGCT |
| Coturnix coturnix | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGAT |
| Coua cristata | (none) | GAAGTTTGCTGCGAAGGGCGATGCCCAGCT |
| Crax alector | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGAT |
| Crotophaga sulcirostris | (none) | ?????????????????GCGATGCCCAGCT |
| Crypturellus soui | (none) | ?????????????????????????????? |
| Cuculus canorus | (none) | ?????????????????????????????? |
| Daptrius ater | (none) | AAAGTTCGCGGCTAAGGGCGATGCCCAGCT |
| Dendrocolaptes certhia | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Diomedea nigripes | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Dromaius novaehollandiae | (none) | AAAGTTCGCTGCCAAGGGTGAGGCCCAACT |
| Dromas ardeola | (none) | ?????????????????????????????? |
| Dryocopus pileatus | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Eudocimus albus | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Eudromia elegans | (none) | AAAGTTCGCTGCCAAGGGTGAGGCTCAGCT |
| Eudyptula minor | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Eupodotis ruficrista | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Eurostopodus macrotis | (none) | ?????????????????????????????? |
| Eurypyga helias | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Falco mexicanus | (none) | GAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Fregata magnificens | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Fringilla montifringilla | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Galbula albirostris | (none) | ???????GCTGCTAAGGGTGATGCCCAACT |
| Gallus gallus | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGAT |
| Gampsonyx swainsonii | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Gavia immer | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Geococcyx californianus | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Geotrygon montana | (none) | AAAGTTCGCTGCCAAGGGTGATTCCCAGAT |
| Grallaria varia | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Grus canadensis | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Haematopus ostralegus | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Heliornis fulica | (none) | CAAGTTTGCTGCCAAGGGTGACGCCCAGCT |
| Hemiprocne mystacea | (none) | ???GTTTGCTGCCAAGGGTGATGCCCAGCT |
| Herpetotheres cachinnans | (none) | GAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Himantornis haematopus | (none) | ???????????????????????CCCAGCT |
| Indicator maculatus | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Jacana jacana | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Larus marinus | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Leptosomus discolor | (none) | GAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Malacorhynchus membranaceus | (none) | GAAGTTTGCTGCCAAGGGTGACGCCCAGCT |
| Malurus melanocephalus | (none) | AAAGTTTGCTGCCAAGGGAGATGCCCAGCT |
| Megalaima virens | (none) | ?????????????????????????????? |
| Megapodius eremita | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Menura novaehollandiae | (none) | ?????????????????????????????? |
| Merops nubicus | (none) | ?????????????????????????????? |
| Mesitornis unicolor | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Micrastur semitorquatus | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
| Micropsitta finschii | (none) | AAAGTTTGCTGCCAAGGGGGATGCCCAGCT |
| Mionectes macconnelli | (none) | ?????????????????????????????? |
| Momotus momota | (none) | ?????TCGCTGCCAAGGGCGATGCCCAGCT |
| Monias benschi | (none) | AAAGTTTGCTGCCAAGGGCGATGCCCAGCT |
| Morus bassanus | (none) | AAAGTTCGCTGCCAAGGGTGATGCCCAGCT |
| Nothoprocta perdicaria | (none) | AAAGTTTGCTGCCAAGGGTGAGGCTCAGCT |
| Numida meleagris | (none) | GAAGTTTGCTGCCAAGGGTGATGCCCAGAT |
| Nyctibius bracteatus | (none) | ???GTTCGCTGCCAACGGTGATGCCCAGCT |
| Nyctibius grandis | (none) | AAAGTTCGCTGCCAAAGGTGATGCCCAGCT |
| Oceanites oceanicus | (none) | AAAGTTTGCTGCCAAGGGTGATGCCCAGCT |
Columns
None of the columns has a description.
