@ARTICLE{TreeBASE2Ref14810,
author = {Jason E Bond and Amy K Stockman},
title = {An integrative method for delimiting cohesion species: finding the population-species interface in a group of Californian trapdoor spiders with extreme genetic divergence and geographic structuring.},
year = {2008},
keywords = {},
doi = {10.1080/10635150802302443},
url = {},
pmid = {},
journal = {Systematic Biology},
volume = {57},
number = {4},
pages = {628--646},
abstract = {Here we present an objective, repeatable approach to delineating species when populations are divergent and highly structured geographically using the Californian trapdoor spider species complex Aptostichus atomarius Simon as a model system. This system is particularly difficult because under strict criteria of geographical concordance coupled with estimates of genetic divergence, an unrealistic number of population lineages would qualify as species (20-60). Our novel phylogeographic approach, which is generally applicable but particularly relevant to highly structured systems, uses genealogical exclusivity to establish a topological framework to examine lineages for genetic and ecological exchangeability in an effort to delimit cohesion species. Both qualitative assessments of habitat and niche-based distribution modeling are employed to evaluate selective regime and ecological interchangeability among genetic lineages; adaptive divergence among populations is weighted more heavily than simple geographical concordance. Based on these analyses we conclude that five cohesion species should be recognized.}
}
Matrix 3306 of Study 2110

Citation title:
"An integrative method for delimiting cohesion species: finding the population-species interface in a group of Californian trapdoor spiders with extreme genetic divergence and geographic structuring.".

This study was previously identified under the legacy study ID S2114
(Status: Published).
Matrices
Title: ITS: ITS1, 5.8S, ITS2
Description: Legacy TreeBASE Matrix ID = M3995
Rows
|
Taxon Label |
Row Segments |
Characters 1?–30 |
| Aptostichus atomarius MY2610 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY2514 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY2618 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY2472 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3320 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3312 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3130 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3310 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3292 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3305 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3325 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3465 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3518 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3505 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3489 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3492 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3491 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY301 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3542 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGG-AA |
| Aptostichus atomarius MY3248 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3352 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
| Aptostichus atomarius MY3098 |
(none)
|
GGCCGCAAGGTCGCGCCGGCGTGCCGGAAA |
Columns
None of the columns has a description.