@ARTICLE{TreeBASE2Ref17672,
author = {Jeffrey K. Stone and David S. Gernandt},
title = {A reassessment of Hemiphacidium, Rhabdocline, and Sarcotrochila (Hemiphacidiaceae)},
year = {2005},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Mycotaxon},
volume = {91},
number = {},
pages = {115--126},
abstract = {The presence or absence of an iodine reactive ascus tip has been applied inconsistently in Hemiphacidiaceae. The genera Hemiphacidium (I-) and Sarcotrochila (I+) have been differentiated based on the reaction despite a high degree of morphological and ecological similarity, while in the genus Rhabdocline, the iodine reaction has been used to differentiate species and circumscribe subspecies. Molecular phylogenetic analyses indicate that currently recognized subspecies of R. weirii are non-monophyletic while those of R. pseudotsugae form distinct sister lineages. The polyphyly of R. weirii suggests that the presence or absence of an I+ ascus pore is not a good predictor of species circumscriptions. To de-emphasize the importance of the iodine reaction in classification within Hemiphacidiaceae and to promulgate a classification more consistent with relationships revealed by molecular phylogenetics, we propose that Hemiphacidium be synonymized under Sarcotrochila and that subspecies of Rhabdocline pseudotsugae and R. weirii be raised to species rank. The following new combinations are proposed: Sarcotrochila longispora, S. plana, S. convexa, Rhabdocline oblonga, R. obovata, and R. epiphylla.}
}
Matrix 45017 of Study 1327
Citation title:
"A reassessment of Hemiphacidium, Rhabdocline, and Sarcotrochila (Hemiphacidiaceae)".
This study was previously identified under the legacy study ID S1253
(Status: Published).
Matrices
Title: Cingulum on Molars in Placentalia
Rows
|
Taxon Label |
Row Segments |
Characters 1?–30 |
| Zalambdalestes |
(none)
|
000000 |
| Maelestes |
(none)
|
111111 |
| Prokennalestes |
(none)
|
000000 |
| Kennalestes |
(none)
|
111111 |
| Protungulatum |
(none)
|
111111 |
| Didolodus |
(none)
|
111111 |
| Tiuclaenus |
(none)
|
111111 |
| Leptictis |
(none)
|
111111 |
| Pleuraspidotherium |
(none)
|
111000 |
| Arctocyon |
(none)
|
111111 |
| Phenacodus |
(none)
|
111111 |
| Ocepeia |
(none)
|
111111 |
| Altacreodus |
(none)
|
111111 |
| Didelphodus |
(none)
|
000000 |
| Puercolestes |
(none)
|
111110 |
| Maiorana |
(none)
|
111111 |
| Pararyctes |
(none)
|
111111 |
| Simpsonotus |
(none)
|
111111 |
| Notostylops |
(none)
|
111111 |
| Isotemnus |
(none)
|
111111 |
| Oldfieldthomasia |
(none)
|
111111 |
| Ultrapithecus |
(none)
|
111111 |
| Notopithecus |
(none)
|
111111 |
| Henricosbornia |
(none)
|
111111 |
| Colbertia |
(none)
|
111111 |
| Trigonostylops |
(none)
|
111111 |
| Miguelsoria |
(none)
|
111111 |
| Diadiaphorus |
(none)
|
111111 |
| Proterotherium |
(none)
|
111111 |
| Asmithswoodwardia |
(none)
|
111111 |
| Pronycticebus |
(none)
|
111111 |
| Magnadapis |
(none)
|
111111 |
| Megaladapis |
(none)
|
111111 |
| Hapalemur griseus 3354 |
(none)
|
000111 |
| Hapalemur griseus 3356 |
(none)
|
111111 |
| Lemur catta |
(none)
|
110100 |
| Eulemur mongoz |
(none)
|
111110 |
| Varecia |
(none)
|
110111 |
| Eulemur fulvus |
(none)
|
110110 |
| Eulemur macaco |
(none)
|
110100 |
| Prolemur |
(none)
|
000111 |
| Lepilemur |
(none)
|
000111 |
| Indri |
(none)
|
000111 |
| Propithecus coquereli |
(none)
|
000111 |
| Propithecus verreauxi |
(none)
|
000111 |
| Avahi |
(none)
|
000111 |
| Phaner |
(none)
|
000111 |
| Nycticebus coucang 719 |
(none)
|
000110 |
| Nycticebus coucang 54 |
(none)
|
000111 |
| Perodicticus |
(none)
|
000111 |
| Galago |
(none)
|
000110 |
| Otolemur |
(none)
|
000110 |
| Loris |
(none)
|
000111 |
| Tarsius |
(none)
|
111111 |
| Ateles belzebuth |
(none)
|
000111 |
| Ateles paniscus |
(none)
|
000111 |
| Lagothrix |
(none)
|
000111 |
| Callicebus |
(none)
|
111111 |
| Pithecia |
(none)
|
111111 |
| Cebus olivaceus |
(none)
|
000111 |
| Cebus apella |
(none)
|
000111 |
| Saimiri |
(none)
|
110111 |
| Aotus |
(none)
|
000111 |
| Alouatta |
(none)
|
000111 |
| Colobus |
(none)
|
111111 |
| Pliocolobus |
(none)
|
111111 |
| Procolobus |
(none)
|
111111 |
| Presbytis |
(none)
|
000111 |
| Pygathris |
(none)
|
000111 |
| Rhinopithecus |
(none)
|
000111 |
| Trachypithecus auratus 306 |
(none)
|
011111 |
| Trachypithecus auratus 961 |
(none)
|
011111 |
| Nasalis |
(none)
|
000111 |
| Cercopithecus alboangularis |
(none)
|
000111 |
| Cercopithecus ascanius |
(none)
|
000111 |
| Cercopithecus cephus 1808 |
(none)
|
000111 |
| Cercopithecus cephus 434 |
(none)
|
010111 |
| Cercopithecus nictitans |
(none)
|
000111 |
| Chlorocebus |
(none)
|
011111 |
| Cercocebus |
(none)
|
111111 |
| Erythrocebus |
(none)
|
111111 |
| Macaca fascicularis |
(none)
|
111111 |
| Macaca sylvanus |
(none)
|
111111 |
| Mandrillus |
(none)
|
111111 |
| Papio cynocephalus |
(none)
|
111111 |
| Papio anubis |
(none)
|
111111 |
| Theropithecus |
(none)
|
111111 |
| Gorilla |
(none)
|
100111 |
| Pan troglodytes 445 |
(none)
|
111111 |
| Pan troglodytes 227 |
(none)
|
000111 |
| Hylobates |
(none)
|
111111 |
| Pongo |
(none)
|
000111 |
| Homo |
(none)
|
000111 |
| Allocebus |
(none)
|
111111 |
| Cheirogalus |
(none)
|
111111 |
| Microcebus |
(none)
|
110111 |
| Nomascus |
(none)
|
111111 |
| Cynocephalus |
(none)
|
000000 |
| Galeopterus |
(none)
|
000000 |
| Tupaia tana |
(none)
|
000110 |
| Tupaia glis |
(none)
|
000100 |
| Esthonyx |
(none)
|
111111 |
| Alcidedorbignya |
(none)
|
111111 |
| Pantolambda |
(none)
|
111111 |
| Coryphodon |
(none)
|
111001 |
| Bemalambda |
(none)
|
111111 |
| Rhinopoma |
(none)
|
000110 |
| Saccolaimus |
(none)
|
000110 |
| Taphozous |
(none)
|
000110 |
| Emballonura |
(none)
|
000111 |
| Pteropteryx |
(none)
|
000110 |
| Coleura |
(none)
|
000110 |
| Nycteris |
(none)
|
000110 |
| Megaderma |
(none)
|
111110 |
| Lavia |
(none)
|
111111 |
| Asellia |
(none)
|
000110 |
| Hipposideros |
(none)
|
000110 |
| Triaenops |
(none)
|
000110 |
| Rhinolopus euryale |
(none)
|
110110 |
| Rhinolophus ferrumequinum |
(none)
|
111111 |
| Noctilio |
(none)
|
000110 |
| Mormoops |
(none)
|
000110 |
| Anoura |
(none)
|
000000 |
| Carollia |
(none)
|
000000 |
| Choeroniscus |
(none)
|
000000 |
| Glossophaga |
(none)
|
000000 |
| Micronycteris |
(none)
|
000110 |
| Mimon |
(none)
|
000110 |
| Phyllostomus |
(none)
|
000110 |
| Platyrrhinus |
(none)
|
000110 |
| Sturnira |
(none)
|
000000 |
| Tonatia |
(none)
|
000110 |
| Trachops |
(none)
|
000110 |
| Vampyrum |
(none)
|
000110 |
| Barbastella |
(none)
|
111111 |
| Chalinolobus |
(none)
|
111111 |
| Eptesicus |
(none)
|
111111 |
| Murina |
(none)
|
111111 |
| Glischropus |
(none)
|
111111 |
| Kerivoula |
(none)
|
111111 |
| Lasiurus |
(none)
|
111111 |
| Miniopterus |
(none)
|
111111 |
| Myotis |
(none)
|
111111 |
| Nyctalus |
(none)
|
111111 |
| Pipistrellus |
(none)
|
111111 |
| Otonycteris |
(none)
|
010110 |
| Plecotus |
(none)
|
111111 |
| Scotophilus |
(none)
|
000110 |
| Rhogeessa |
(none)
|
111111 |
| Molossus |
(none)
|
111110 |
| Mops |
(none)
|
000110 |
| Chaerophon |
(none)
|
000110 |
| Echinosorex |
(none)
|
111111 |
| Neurogymnurus |
(none)
|
111110 |
| Leptacodon |
(none)
|
111111 |
| Hylomys |
(none)
|
111111 |
| Paraechinus |
(none)
|
111110 |
| Atelerix albiventris |
(none)
|
000110 |
| Atelerix algirus |
(none)
|
111110 |
| Erinaceus |
(none)
|
111110 |
| Solenodon paradoxus 341 |
(none)
|
000111 |
| Solenodon paradoxus 156 |
(none)
|
000110 |
| Crocidura |
(none)
|
000110 |
| Paracrocidura |
(none)
|
000110 |
| Sylvisorex |
(none)
|
000110 |
| Myosorex |
(none)
|
000110 |
| Anourosorex |
(none)
|
000110 |
| Suncus |
(none)
|
000110 |
| Blarina |
(none)
|
000110 |
| Nectogale |
(none)
|
000110 |
| Neomys |
(none)
|
100110 |
| Sorex |
(none)
|
000110 |
| Galemys |
(none)
|
000000 |
| Desmana |
(none)
|
000000 |
| Scalopus |
(none)
|
000000 |
| Euroscaptor |
(none)
|
111000 |
| Talpa |
(none)
|
000000 |
| Eozygodon |
(none)
|
111111 |
| Eritherium |
(none)
|
111111 |
| Phosphatherium |
(none)
|
111111 |
| Potamogale |
(none)
|
000000 |
| Tenrec |
(none)
|
000000 |
| Setifer |
(none)
|
000000 |
| Hemicentetes |
(none)
|
000000 |
| Oryzorictes |
(none)
|
000000 |
| Microgale dobsoni 2507 |
(none)
|
000000 |
| Microgale dobsoni 2493 |
(none)
|
000000 |
| Limnogale |
(none)
|
000000 |
| Echinops |
(none)
|
000000 |
| Geogale |
(none)
|
000000 |
| Micropotamogale |
(none)
|
000000 |
| Acotherulum |
(none)
|
111100 |
| Dichobune |
(none)
|
111111 |
| Metriotherium |
(none)
|
111111 |
| Diacodexis |
(none)
|
111111 |
| Doliochoerus |
(none)
|
111111 |
| Cebochoerus |
(none)
|
111111 |
| Cainotherium |
(none)
|
111111 |
| Dacrytherium |
(none)
|
111000 |
| Anoplotherium |
(none)
|
111000 |
| Vigugna |
(none)
|
000000 |
| Lama |
(none)
|
000000 |
| Camelus bactrianus |
(none)
|
000000 |
| Camelus dromedarius |
(none)
|
000000 |
| Tayassu |
(none)
|
111011 |
| Babyrousa |
(none)
|
111111 |
| Hylochoerus |
(none)
|
111001 |
| Pecari |
(none)
|
111001 |
| Potamochoerus |
(none)
|
111111 |
| Sus |
(none)
|
111111 |
| Cervus elaphus |
(none)
|
011001 |
| Muntiacus muntjac |
(none)
|
111111 |
| Muntiacus sp |
(none)
|
101000 |
| Axis |
(none)
|
111111 |
| Odocoileus hemonius |
(none)
|
000000 |
| Odocoileus virginianus |
(none)
|
111111 |
| Cervus nippon |
(none)
|
000000 |
| Rucervus |
(none)
|
111011 |
| Elaphurus |
(none)
|
000000 |
| Rangifer tarandus 85.1 |
(none)
|
010000 |
| Rangifer tarandus 85.2 |
(none)
|
000000 |
| Alces |
(none)
|
110000 |
| Hydropotes |
(none)
|
000000 |
| Blastocerus |
(none)
|
000000 |
| Elaphodus |
(none)
|
000000 |
| Moschus |
(none)
|
000000 |
| Tragulus javanicus |
(none)
|
000000 |
| Tragulus napu |
(none)
|
000000 |
| Moschiola |
(none)
|
000000 |
| Hyemoschus |
(none)
|
110111 |
| Rusa timorensis |
(none)
|
001111 |
| Rusa unicolor 543 |
(none)
|
111111 |
| Rusa unicolor 46 |
(none)
|
111111 |
| Pudu |
(none)
|
000000 |
| Dama dama |
(none)
|
111111 |
| Dama mesopotomica |
(none)
|
000000 |
| Mazama gouazoubira 796 |
(none)
|
011111 |
| Mazama gouazoubira 687 |
(none)
|
000000 |
| Mazama americana 135 |
(none)
|
000000 |
| Mazama americana I2233 |
(none)
|
000000 |
| Hippocamelus |
(none)
|
000000 |
| Capreolus |
(none)
|
000000 |
| Litocranius |
(none)
|
000000 |
| Tragelaphus |
(none)
|
000000 |
| Sylvicapra |
(none)
|
000000 |
| Cephalophus |
(none)
|
000000 |
| Giraffa |
(none)
|
000000 |
| Okapia |
(none)
|
000000 |
| Choeropsis |
(none)
|
111111 |
| Hippopotamus |
(none)
|
111111 |
| Miacis |
(none)
|
110110 |
| Vulpavus |
(none)
|
110110 |
| Lycophocyon |
(none)
|
100110 |
| Dormaalocyon |
(none)
|
110110 |
| Paramys |
(none)
|
111111 |
| Paradelomys |
(none)
|
111111 |
| Adelomys |
(none)
|
111111 |
| Theridomys |
(none)
|
111111 |
| Tuscahomys |
(none)
|
111111 |
| Sciuravus |
(none)
|
111111 |
| Cocomys |
(none)
|
111111 |
| Pappocricetodon |
(none)
|
111111 |
| Spermophilus fulvus |
(none)
|
111111 |
| Spermophilus citellus |
(none)
|
111001 |
| Callospermophilus lateralis |
(none)
|
111111 |
| Rhombomylus |
(none)
|
000111 |
| Matutinia |
(none)
|
000111 |
| Gomphos |
(none)
|
000111 |
| Allopterodon |
(none)
|
000000 |
| Anisodon |
(none)
|
111111 |
| Hyracotherium |
(none)
|
111111 |
| Palaeotherium |
(none)
|
111111 |
| Pachynolophus |
(none)
|
111111 |
| Diceros |
(none)
|
111110 |
| Rhinoceros sondaicus |
(none)
|
111110 |
| Rhinoceros unicornis |
(none)
|
111110 |
| Tapirus terrestris |
(none)
|
111111 |
| Tapirus pinchaque |
(none)
|
111111 |
| Tapirus indicus |
(none)
|
111111 |
| Pachyhyrax |
(none)
|
111111 |
| Procavia |
(none)
|
111111 |
| Dendrohyrax |
(none)
|
111111 |
| Heterohyrax |
(none)
|
111111 |
| Chrysochloris |
(none)
|
000000 |
| Calcochloris leucorhinus 103 |
(none)
|
000000 |
| Calcochloris leucorhinus 1331 |
(none)
|
000000 |
Columns
| Column |
Character Description |
|
1
|
M1 anterior cingulum
|
|
2
|
M2 anterior cingulum
|
|
3
|
M3 anterior cingulum
|
|
4
|
M1 posterior cingulum
|
|
5
|
M2 posterior cingulum
|
|
6
|
M3 posterior cingulum
|
Go to search
Citation
Taxa
Matrices
Trees
Analyses
