TreeBASE Search-Matrix 45066 of study 22396

@ARTICLE{TreeBASE2Ref28222, author = {Jackson Ryan Roberts and Kenneth M. Halanych and Covadonga R Arias and Stephen S Curran and Stephen A Bullard}, title = {A New Species of Spirorchis MacCallum, 1918 (Digenea: Schistosomatoidea) and Spirorchis scripta Stunkard, 1923 Infecting River Cooter, Pseudemys concinna (Le Conte, 1830), (Testudines: Emydidae) in the Pascagoula River, Mississippi, U.S.A.; Including an Updated Phylogeny for Spirorchis spp.}, year = {2018}, keywords = {Spirorchis, Emydidae, Pseudemys concinna, taxonomy, Pascagoula River, Reelfoot Lake, Coastal Plain, 28S, 18S}, doi = {}, url = {http://}, pmid = {}, journal = {Comparative Parasitology}, volume = {85}, number = {}, pages = {}, abstract = {River cooters (Pseudemys concinna [Le Conte, 1830]) from the Pascagoula River (30?37'07.67"N, 88?36'44.53"W; Mississippi, U.S.A.) were infected by Spirorchis scripta Stunkard, 1923 and Spirorchis testiplexus n. sp. The new species resembles Spirorchis artericola (Ward, 1921) Stunkard, 1921 and Spirorchis innominatus Ward, 1921 (type species) by having a median esophageal diverticulum, ceca that extend slightly posterior to the genitalia, 10 testes, and a testicular column that extends anteriad to near the cecal bifurcation. Based on a comparative morphological study of existing type materials, vouchers, and published descriptions of similar congeners, S. testiplexus is unique by the combination of having a proportionally wider body, laterally-directed cecal diverticula, deeply lobed testes, a testicular column that fills the intercecal space, and an external seminal vesicle that occupies the space between the posterior-most testis and the ovary and that passes dorsal or dorsolateral to the ovary. The large subunit rDNA (28S) Bayesian inference phylogenetic analysis (including 16 turtle blood fluke species of 7 genera) showed a strongly supported monophyletic Spirorchis MacCallum, 1918 sister to Spirhapalum siamensis Tkach, Snyder, and Vaughn, 2009.} }

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Matrix 45066 of Study 22396

Citation title: "A New Species of Spirorchis MacCallum, 1918 (Digenea: Schistosomatoidea) and Spirorchis scripta Stunkard, 1923 Infecting River Cooter, Pseudemys concinna (Le Conte, 1830), (Testudines: Emydidae) in the Pascagoula River, Mississippi, U.S.A.; Including an Updated Phylogeny for Spirorchis spp.".

Study name: "A New Species of Spirorchis MacCallum, 1918 (Digenea: Schistosomatoidea) and Spirorchis scripta Stunkard, 1923 Infecting River Cooter, Pseudemys concinna (Le Conte, 1830), (Testudines: Emydidae) in the Pascagoula River, Mississippi, U.S.A.; Including an Updated Phylogeny for Spirorchis spp.".

This study is part of submission 22396 (Status: Published).

Matrices

Title: Spirorchis spp. 28S rRNA and other blood flukes

Rows

Taxon Label	Row Segments	Characters 1?–30
Baracktrema obamai KY243883	(none)	CTTAGTAACGGCGAGTGAACAGGGATTAGC
Hapalotrema mehrai AY604708	(none)	CTTAGTAACTGCGAGTGAACAGGGATGAGC
Learedius learedi AY604707	(none)	CTTAGTAACTGCGAGTGAACAGGGATTAGC
Spirhapalum polesianum AY604705	(none)	CCTAGTAACTGCGAGTGAAGATGGATGAGC
Spirhapalum siamensis FJ481166	(none)	CCTAGTAACTGCGAGTGAAGAGGGATTAGC
Spirorchis artericola AY604704	(none)	CCTAGTAACTGCGAGTGAAGAGGGATGAGC
Spirorchis cf scripta KY091666	(none)	CCTAGTAACTGCGAGTGAAGAGGGATTAGC
Spirorchis collinsi KY091664	(none)	---AGTAACTGCGAGTGAAGAGGGATTAGC
Spirorchis haematobius FJ481164	(none)	-----------------------------C
Spirorchis testiplexus MH002459	(none)	-CTAGTAACTGCGAGTGAAGAGGGATTAGC
Spirorchis picta KY091665	(none)	CCTAGTAACTGCGAGTGAAGAGGGATTAGC
Spirorchis scripta AY222174	(none)	CCTAGTAACTGCGAGTGAAGAGGGATTAGC
Unicaecum sp AY604711	(none)	CCTAGTAACGGCGAGTGAAGAGGGAAAAGC
Vasotrema robustum AY604706	(none)	CCTAGTAACTGCGAGTGAAGAGGGATTAGC
Vasotrema cf robustum MH002457	(none)	------------------------------
Spirorchis haematobius MH002458	(none)	------------------------------

Columns

None of the columns has a description.