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Matrix 46750 of Study 22409

About Citation title: "Tangled history of a multigene family: the evolution of Isopentenyltransferase genes".
About Study name: "Tangled history of a multigene family: the evolution of Isopentenyltransferase genes".
About This study is part of submission 22409 (Status: Published).

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Title: Isopentenyltransferase genes IPPT IPT VirEdomain

Description: IPPT, IPT, VirE domain phylogeny

Rows

Taxon Label Row Segments Characters 1?–30
Fimbriimonas ginsengisoli A_A0A068NZ43_9BACT  (none) QVYRGLDIGTAKPEYLLLDGVGEYGRNVVV
Paramecium tetraurelia A_A0CSW7_PARTE  (none) QIYKNWPISSNWPKYELIGTITSYRDNAIL
Ostreococcus lucimarinus A_A4RZH4_OSTLU  (none) QIYRGLDVGSGKVGHHMLSDANAYGRDAVV
Physcomitrella patens A_A9TW02_PHYPA  (none) QVYKGMNVGSAKTPHHLLDSASRFGHVPIV
Monosiga brevicollis A_A9V2N5_MONBE  (none) HIFRELQVGLDKVPCHFVDNAGDFGKTPII
Candidatus Cloacimonas acidaminovorans  (none) QVYCYLDIGTAKVTHHLIDNAGAFGKIPII
Cryptosporidium muris A_B6ADE9_CRYMR  (none) QLYKGFDIGTGKVSHHLLDTVSRYDSIPIV
Populus trichocarpa A_B9GGV0_POPTR  (none) QVYRGLDVGSAKPTHHLLDSVGQFGRVPIV
Ricinus communis A_B9SE49_RICCO  (none) QVYRGLDVGSAKPSHHLIDSVGKFGRVPIV
Gemmatimonas aurantiaca A_C1A8L3_GEMAT  (none) QIYREFDIGTAKPSHYGVSSAHRWGTPPVI
Micromonas commoda A_C1DZ11_MICCC  (none) QVFEGLDVGASKLPHHLLDGAGEFGKTPIV
Micromonas pusilla A_C1N2S4_MICPC  (none) QVYRGLDVGSGKLAHHALDNAGAFGKVPIV
Anaerococcus prevotii A_C7RHL7_ANAPD  (none) QVYRYMNIGTNKT-HFMLNSVDDFLRIPIV
Thermobaculum terrenum A_D1CC00_THET1  (none) QVYRYMDIGTAKPTHHCIDTLAQQHKVPFV
Acidaminococcus fermentans A_D2RKG8_ACIFV  (none) LVFRHMDIATAKPTHHLVDSVVDFGKIPIL
Naegleria gruberi A_D2VRI7_NAEGR  (none) QMYKECSIGSNKIKHHLVNTVQQFGKLPIL
Helicobacter mustelae A_D3UIW2_HELM1  (none) SIYKHINILSAKPSHYGIDNAMLFKKILIL
Denitrovibrio acetiphilus A_D4H0L7_DENA2  (none) QVYKYMDIGTAKADHHLIDSAGVFGNIPVV
Kyrpidia tusciae A_D5WPS6_KYRT2  (none) QIYRGMDIGTAKIPHHLIDTVVDYGRWAIV
Desulfurivibrio alkaliphilus A_D6Z1S7_DESAT  (none) QVYRYLDIGTAKATHHLIDSLARFGKAALL
Selaginella moellendorffii A_D8SPM7_SELML  (none) QVYRGLDVGSAKTPHHLLDTAGAFGQVPIV
Fibrobacter succinogenes A_D9S9G1_FIBSS  (none) QIYKDFAIGTAQPSHHMVDSAGDFNQNYIL
Loa loa A_E1FQ17_LOALO  (none) QIYKGLDIATNKVSHHMMSNVHQFGKLPVV
Olsenella uli A_E1R0A0_OLSUV  (none) QVYRGMDVGTAKTPLLMVDSAKLFGLPAVL
Sediminispirochaeta smaragdinae A_E1R766_SPISS  (none) QVYRRFSIGTAKPDHYLIDSAGDFGHIPLM
Halobacteriovorax marinus A_E1WXL3_HALMS  (none) -FYKELSIGTAKPSHHLVDNASDFNKIPIF
Halanaerobium praevalens A_E3DLE0_HALPG  (none) QIYQKMDIGTAKASHHLIDSVSEFKKIPLL
Acetoanaerobium sticklandii A_E3PY35_CLOSD  (none) QIYKQMDIGTAKITHHMIDTVADYGKVPII
Thermaerobacter marianensis A_E6SK48_THEM7  (none) QVYRGLDIGTDKVDHHLIDSVAEFGRYPVL
Desulfurispirillum indicum A_E6W2U9_DESIS  (none) QVFRHLSIGTAKPDHHMLDHAHRYGVVPVL
Nitratifractor salsuginis A_E6WYS4_NITSE  (none) AIYKEIDIASAKPTHFGIDDVTRFSKPLIL
Anaerolinea thermophila A_E8MXN6_ANATU  (none) -FYRGMDIGTAKPTHHLIDSLALFGKLPIL
Desulfurobacterium thermolithotrophum A_F0S219_DESTD  (none) QVYKGLDIGTDKVSHYLIDSVAEFNKYPIV
Rubinisphaera brasiliensis A_F0SKF9_RUBBR  (none) AIYRRMDIGTAKPTHHLIDSTADFNKTPIF
Syntrophobotulus glycolicus A_F0SZH7_SYNGF  (none) QVYQELDIGSAKPSHHLINTTAVFRKMPII
Aureococcus anophagefferens A_F0XYJ7_AURAN  (none) QLYRGLDIGANKPSHHLVDSAGEWGGVPVV
Dictyostelium purpureum A_F1A4W7_DICPU  (none) QIYKNLSVGSNS-NFHLYNNVYNYGNTPII
Hippea maritima A_F2LY49_HIPMA  (none) QIYRFMDIGSAKPSHYFIDSAGEFGKNSVI
Salpingoeca rosetta A_F2U655_SALR5  (none) QVYKGMDIGSDKVSHHLIDSSGDFGKTPLI
Erysipelothrix rhusiopathiae A_F5WQQ0_ERYRF  (none) AVYKELNIGSAKPTHHLIDHVARFGKTPII
Simkania negevensis A_F8L9Q2_SIMNZ  (none) QVYRGMDIGTAKVSHHLIDNVMQFERTPIV
Spirochaeta thermophila A_G0GEW7_SPITZ  (none) QVYRGMDIGTAKPSHHLIDTVGDFGKLPVV
Megasphaera elsdenii A_G0VQN4_MEGEL  (none) QIYRHMDIGTAKPTHYFIDSAARFGKVPIV
Latimeria chalumnae A_H3B1G7_LATCH  (none) QIYKGLDIITNKVTHHMISTVVEFKKIPIV
Spirochaeta africana A_H9UI14_SPIAZ  (none) QAYRGLDIGTAKPPYHLIDSAGRFGALPVI
Ignavibacterium album A_I0AJP2_IGNAJ  (none) QIFKHLSIGTAKPTHYFVDNADIFNKTPVV
Caldisericum exile A_I0GIN1_CALEA  (none) QFYKGMDIGTAKVPHHFVDSVSQYKKIPLI
Selenomonas ruminantium A_I0GPI3_SELRL  (none) LFYKGFDIGSAKPTHHLVDNVTDFGEIPII
Caldilinea aerophila A_I0I9T4_CALAS  (none) QIYRGMDIGTAKATHHLIDTVAEYGGTPLL
Phycisphaera mikurensis A_I0IFJ0_PHYMF  (none) QVYRHLDAGTAKPTHHLVDTVRDWGRVPIV
Leptospirillum ferrooxidans A_I0INV2_LEPFC  (none) QIYKHLDIGTGKPSHHLIDSAGMFGKKAVL
Brachypodium distachyon A_I1GV33_BRADI  (none) QVYRSLDIGSAKPSHHLIDSAGMFGCVPVV
Glycine max A_I1M325_SOYBN  (none) QVYRGLDVGSAKPSHHLVDSVGQFGRVPIV
Acetomicrobium mobile A_I4BVW5_ANAMD  (none) QVYRYMDIGTDKVSHHLVDTAARFRKRPLL
Helicobacter cinaedi A_I7GZM0_9HELI  (none) -IYKGFDIASAKPTYHALDNAMLFDTPLLI
Arabidopsis thaliana A_IPT9_ARATH  (none) QVYKGLDVGSAKPSHHLIDSVGQFGRVPIV
Oryza brachyantha A_J3MHV5_ORYBR  (none) QVYRSLDVGSAKPSHRLIDSAGDFGRVPIV
Leptospirillum ferriphilum A_J9ZBZ4_LEPFM  (none) QIYRDMNIGTAKPPHHLLDSAGQFGKKVAL
Setaria italica A_K3Z677_SETIT  (none) QVYRGLDIGSAKPSHHLIDSAGSFGRVPVV
Solanum lycopersicum A_K4DCV4_SOLLC  (none) QVYRGLDVGSAKPSHHLVDSVGQFGRVPIV
Singulisphaera acidiphila A_L0DK24_SINAD  (none) TLYRGMDIGTAKPTHHLIDSVADFGKRALF
Thermodesulfobium narugense A_M1E931_9FIRM  (none) QVYKYMDIGTAKPTHYLIDNAFIFSKIPLI
Bdellovibrio exovorus A_M4VCJ3_9DELT  (none) QFYKGLIVGAAAPSHFLYSTAGGYFRGPVF
Ilumatobacter coccineus A_M5A3P6_9ACTN  (none) QVYRGMDIGTAKPTHHCIDTVAEFDRRALL
Acidithiobacillus ferrooxidans A_MIAA_ACIF2  (none) LVYRHFDIGSAKPSHALVDSAGLFGRIPLL
Akkermansia muciniphila A_MIAA_AKKM8  (none) QVYRELPILTAAPSHHMVSNATEHGKIAIV
Anaplasma marginale A_MIAA_ANAMF  (none) QIYQHVPTITDQAEFGLYGSVGLWKSPAIV
Aquifex aeolicus A_MIAA_AQUAE  (none) AVYKFMDIGTAKP-HHLIDDAKIFGKVPIV
Bacillus subtilis A_MIAA_BACSU  (none) QIYKGMDIGTAKITHHLIDSTADYGKLPMI
Borrelia burgdorferi A_MIAA_BORBU  (none) QVYKEFNIASSKPSHHLVDTIGIFKKIPIF
Caldicellulosiruptor saccharolyticus A_MIAA_CALS8  (none) CVYKYMDIGTAKPTHYVIDNVALFGKIPLL
Campylobacter jejuni A_MIAA_CAMJE  (none) CVYKEINIASAKPSYFGVNNVELFNLPLII
Chlorobium phaeobacteroides A_MIAA_CHLPD  (none) QIYRELNIGTAKPSHHFVNTAGNFGKNVLI
Chlamydia trachomatis A_MIAA_CHLTR  (none) QVYQGMDIGTAKVSHHLIDNAVDFNKVPIL
Clavibacter michiganensis A_MIAA_CLAMS  (none) QLYRGMDIGTAKLPHHMLDTVAAYGAVPIL
Coprothermobacter proteolyticus A_MIAA_COPPD  (none) -FYKAATIGTAKPPHWFIDSVGAFGVTPIV
Cytophaga hutchinsonii A_MIAA_CYTH3  (none) QVFKELSIGTAKATHYFVDNAGMFHDVVIV
Deinococcus radiodurans A_MIAA_DEIRA  (none) TVYRGLDLGTAKPTHHLLDDVAQYGRLPLV
Desulfovibrio desulfuricans A_MIAA_DESDA  (none) QVYADFPRITAQPSHHLYGSAGRWGKIPLL
Desulfococcus oleovorans A_MIAA_DESOH  (none) QVYRYMDIGTAKPTHHMIDSAGRYGVLPVL
Dictyoglomus turgidum A_MIAA_DICTD  (none) QIYQGMDIGTAKPSHHLIDTVAEFRRFPLL
Escherichia coli A_MIAA_ECOLI  (none) LIYKGMDIGTAKPNHRLLDSAADFGRIPLL
Elusimicrobium minutum A_MIAA_ELUMP  (none) QVYKYLTVGTAKPEYHLVDNTGSFGKTAIF
Exiguobacterium sp. A_MIAA_EXISA  (none) QVYRGMDIGSAKVTHHLIDSVAMFGKLPII
Finegoldia magna A_MIAA_FINM2  (none) QIYKYMDIGTAKVEHHLIDNVEQFNKIPII
Francisella tularensis A_MIAA_FRATT  (none) LVYKGMDIGTAKPTHHLIDSVADFGREVLL
Fusobacterium nucleatum A_MIAA_FUSNN  (none) QVYRGLNIGTAKIRHHLIDSVGNFEKNFLL
Gloeobacter violaceus A_MIAA_GLOVI  (none) QVYREFDIGTAKPTHCLIDNVARYGKPALL
Gramella forsetii A_MIAA_GRAFK  (none) QFFKEMKIGTAVPDHHFIQSVGDFHKVAVM
Helicobacter hepaticus A_MIAA_HELHP  (none) SIYKYLDIASAKPTYYALNNVMIFHTPLLI
Helicobacter pylori A_MIAA_HELPY  (none) SIYKDINIASAKPSHYALDNAPLFKEILLI
Kosmotoga olearia A_MIAA_KOSOT  (none) QIYRYMDIGTAKPTHHVIDNVFEYGRIPVF
Lactobacillus brevis A_MIAA_LACBA  (none) QVYRHLDIGTAKATHHLIDTVAQFGHLPIV
Lactobacillus delbrueckii A_MIAA_LACDA  (none) QIYKEVAIGTAKASHYLVDSVKNFGKLPII
Lawsonia intracellularis A_MIAA_LAWIP  (none) QLYKGVPIITAQPTHKLYASAGRWTKIPLL
Leptospira biflexa A_MIAA_LEPBP  (none) QVYRDLPVGTTAPTHWLIGNANQFGKIPFL
Leuconostoc mesenteroides A_MIAA_LEUMM  (none) QIYRNLDVGTAKVTHHLIDSVGDFGKLPII
Magnetococcus marinus A_MIAA_MAGMM  (none) QVYRGMDIGSAKPTHHLIDSAGRFGVIPAL
Methylacidiphilum infernorum A_MIAA_METI4  (none) QVYRKLDIGTAKPSYGGIDNAFLFNRRGVL
Mycoplasma gallisepticum A_MIAA_MYCGA  (none) QVYKELNAGVNKPSYHFISSIAHFDWT-IV
Mycoplasma penetrans A_MIAA_MYCPE  (none) QVYKEISKGINKPEHHFVNHIKRFDKNFIL
Neorickettsia sennetsu A_MIAA_NEOSM  (none) QVYRELPILTSQ--GMLYGSVASWKGIPLI
Novosphingobium aromaticivorans A_MIAA_NOVAD  (none) QVYADLRVLSARPSHVLFGSAADWGALPIL
Oligotropha carboxidovorans A_MIAA_OLICO  (none) QVYRDLRVLTARPTHRLYGSAGAWGRLPIF
Onion yellows A_MIAA_ONYPE  (none) QMYQKYDIGTAKITHHLLDSIYHFTPLPLF
Opitutus terrae A_MIAA_OPITP  (none) -FYRGMDIGTAKPTHHLVDNIAGYGREALV
Pediococcus pentosaceus A_MIAA_PEDPA  (none) QVYQKLDIGTAKVTHHLIDSAADFGKLPIV
Pelagibacter ubique A_MIAA_PELUB  (none) QVYKKLKILTARPNHHLYGSTGQWKKIPIL
Propionibacterium acnes A_MIAA_PROAC  (none) VVYRGMDIGTATPTHHLVSSLVLMGVIPVL
Psychrobacter sp. A_MIAA_PSYWF  (none) LIYKDMNIGTAKPTHHLVDSVANFGKTPLL
Rhodopirellula baltica A_MIAA_RHOBA  (none) AVYRGMDIGSAKPTHHLIDSVAEYSKRPMF
Rhodospirillum centenum A_MIAA_RHOCS  (none) QLYDGLRVLTARPSHRLYGSAARWGRVPVV
Rickettsia prowazekii A_MIAA_RICPR  (none) QVYKEIPIITASPIYHLYNSVIKYGKLPIL
Salinibacter ruber A_MIAA_SALRD  (none) QVYEELTIGTAKPSHHFIGSAGAYGRRPLV
Solibacter usitatus A_MIAA_SOLUE  (none) QVYRHFDIGTAKLPHHLIDTAGEYGRLPIL
Sorangium cellulosum A_MIAA_SORC5  (none) QIYREFDLGSGKPTHHLVDDAQRFGRVPVV
Sulfurihydrogenibium sp. A_MIAA_SULSY  (none) MVYKYMDIGTAKPSHYVIDSVKDYGKIPIV
Synechococcus sp. A_MIAA_SYNR3  (none) QLYAGMDIGTAKPTHELLNNLQQFGRPALL
Thermus thermophilus A_MIAA_THET8  (none) MVYRGLDIGTDKPTHHLVDSVARFGKLPLV
Treponema pallidum A_MIAA_TREPA  (none) QVYRGLDVGTGKDLYHLIDNVFRFHKVPII
Tropheryma whipplei A_MIAA_TROWT  (none) QLYRDMDIGTAKLSHHQIDSVARYNSIPFL
Uncultured termite A_MIAA_UNCTG  (none) QIYKYLDTGTNKEGQHLTDSAAKFGKVPVV
Wolinella succinogenes A_MIAA_WOLSU  (none) SIYQEINIASAKPSHFGIDNAALFKKALLL
Azobacteroides pseudotrichonymphae A_MIAA1_AZOPC  (none) QVYRNMTIGTGKDLYHLIDNVFRFGKLPIL
Geobacter lovleyi A_MIAA1_GEOLS  (none) TVYRGLDIGSAKPTHHLLDTAADFGKRPIL
Hahella chejuensis A_MIAA1_HAHCH  (none) QVFRGMDIGTGKDLYHLIDSLFDYEKRPII
Porphyromonas gingivalis A_MIAA1_PORGI  (none) QIFRELPIGTAAPTHLFVGSAGMYYRGVLL
Treponema denticola A_MIAA1_TREDE  (none) QVYKHMHIGSASPSHHLIASAADFGKLPVL
Clostridium sp. A_R5AGI8_9CLOT  (none) QVYREMDIGSAKPSHHMIDSVAKYGKLPII
Veillonella sp. A_R5BDP3_9FIRM  (none) QIYKGLDIGTAKPSHRLIDSAADFGHMPIL
Firmicutes bacterium A_R5CWF9_9FIRM  (none) QVYRHMDIGTAKVTHYMIDSAARYGKLPII
Coprobacillus sp. A_R5G4C6_9FIRM  (none) -MKRKLNIGTAKIDHHLIDSCADFGKVPFI
Brachyspira sp. A_R5LIJ0_9SPIR  (none) QVYKYMDIGSAKPSYKMIDNIKDYDKAPIF
Clostridium sp. A_R5SR97_9CLOT  (none) QIYRGLDVGTAKVSHHLVDSVADFNKIPIL
Corallococcus sp. A_R5W500_9DELT  (none) QIYCGMDIGTAKIKHYMLDSAFEF---PIV
Clostridium sp. A_R5ZC67_9CLOT  (none) -VYQGFDIGSAKSTNYFIDTVFEFNVDGVI
Clostridium sp. A_R6AYV2_9CLOT  (none) QIYRGLDIGSAKPSHHLIDNVAMFGKNALV
Clostridium sp. A_R6BSM0_9CLOT  (none) QIYKHLTVGTAKPLHHLIDSVADYGHLPVL
Firmicutes bacterium A_R6H037_9FIRM  (none) QIYRGMDIGTGKITHHMLDSVGQYGKLPII
Clostridium sp. A_R6PD01_9CLOT  (none) QIYKEFDIATAKPSHHLMDTVADFDKIPVV
Faecalibacterium sp. A_R6PWF6_9FIRM  (none) QIYKGLDVGTAKVTHHGVDSVADFNTLPIL
Staphylococcus sp. A_R6T832_9STAP  (none) QVYRKMNIGTAKPTHHLIDSISDYNKVPLL
Firmicutes bacterium A_R6U1Z5_9FIRM  (none) QIYRGMDIGTAKPTHHLIDSCADYGKIPVF
Ruminococcus sp. A_R6XCW7_9FIRM  (none) QVYRRMDIGTAKPTHHLIDSAADFGRLPFV
Firmicutes bacterium A_R6XFU8_9FIRM  (none) QVYKEFELGTACPRHHFFKDVKKYGQDVIL
Clostridium sp. A_R6YL61_9CLOT  (none) QVYKKIDIASAKVTHHLFDTVYDYNKNVII
Coprobacillus sp. A_R7DRE5_9FIRM  (none) QIYQEFDIGTAKPTHHLFDSPKEYNHLPII
Anaerotruncus sp. A_R7EUL2_9FIRM  (none) QIYRGMDIGTAKPTHRMFDSCADYGRLPVL
Acidiphilium sp. A_R7G499_9PROT  (none) AIYKNLNIGSAKPDHYMINSVSDYDKLPII
Clostridium sp. A_R7GAX8_9CLOT  (none) AVYKKLDIGSAKPTHYLIDDVMTFKKPMII
Faecalibacterium sp. A_R7I6W6_9FIRM  (none) QIYRGMDIGTAKPTHHMVDSVARYGHRALL
Subdoligranulum sp. A_R7K3Z0_9FIRM  (none) QIYIGMDIGTAKPDHHLIDNAFTFFKQPLI
Acidaminococcus sp. A_R7K9G6_9FIRM  (none) QIYKGLNIGTAKESHYLIDSVAQFGKIPFV
Eubacterium sp. A_R7NNX5_9FIRM  (none) QIYKYMDIGTAKPTHYMMDSVADYNKLPIL
Dialister sp. A_R7PQ45_9FIRM  (none) QVYQGMDIGTAKVSHYLVDSAAMFGRIPFI
Desulfofustis sp. A_V4JJC2_9DELT  (none) QVYRHMDIGTAKATHHLIDHAASFGALPIL
Candidatus Saccharibacteria bacterium A_V5RWN0_9BACT  (none) AIYKGMDIGTAKPTHWGIDTASDFGRVPLL
Salinispora pacifica A_V5WKQ1_9SPIO  (none) QVYRGMDIGTAKADHHLLDNLADFGAVPVI
Candidatus Babela massiliensis A_V6DF92_9DELT  (none) QFYKPLSIGTAKPDYYLFDTASEFNILPII
Desulfurella acetivorans A_W0JLN2_DESAE  (none) QIYKYFDIGSAKPPHHLIDSAQEFKKVPIL
Amborella trichopoda A_W1Q0J5_AMBTC  (none) QVYQGLDVGSAKPSHHLLDSVGQFGYVPIV
Spiroplasma culicicola A_W6A7S4_9MOLU  (none) QIFKGTDIATNKIKHHLISSVADYDKTPIV
Ralstonia solanacearum B_A4L735_RALSL  (none) QCCHELAVGSGRPLREYLCPAADAERALIL
Rhodococcus fascians B_G8JYU5_RHOFA  (none) QCYSDLLVTSGRAFRVWLDDPDEAGEAVVM
Agrobacterium vitis B_IPT_AGRVS  (none) QCYSQLSVGGGRPSRIYLISAERAEGGVIL
Pantoea agglomerans B_IPT_PANAY  (none) QGYHEISTGSGAPTRIYITTAKDYKSDFII
Pseudomonas savastanoi B_IPT_PSESS  (none) QCCFDIATGSGRPHRIYLDSAEEASGGVIL
Rhizobium radiobacter B_IPT_RHIRD  (none) QCCPQLSTGSGRPTRLYLDTAKQAKGGLIL
Agrobacterium tumefaciens B_IPTZ_AGRT7  (none) QCCPQIATGSGRPLRIYLDDAESAEDGLIL
Dichelobacter nodosus C_A5EW99_DICNV  (none) Y----------QP-FDHVI---------VL
Hamiltonella defensa C_C4K6T1_HAMD5  (none) L----------KP-ADMVP---------IL
Staphylococcus aureus C_Q2FYB7_STAA8  (none) M----------EP-FDYML---------TL
Nostoc sp. C_Q8YK11_NOSS1  (none) F----------EP-HDEIT---------IL
Lactococcus lactis C_Q9CI49_LACLA  (none) Y----------RP-FDFVL---------DL
Xylella fastidiosa C_Q9PG00_XYLFA  (none) LW-----VDRNNPSVDFML---------VL

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