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Citation
Taxa
Matrices
Trees
Analyses
Matrix 58036 of Study 26669
Citation title: "Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa".
Study name: "Novel taxa in the Phaeomoniellales and other fungi associated with wounds, cankers and other symptomatic wood of European and wild olives in South Africa".
This study is part of submission 26669
(Status: Published).
Matrices
Title: Diaporthe - ITS alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Phomopsis sp. CH 01 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN550 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe foeniculina CBS 111553 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Phomopsis sp. CH 03 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN301 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN223 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN866 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. CSN224 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN225 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN321 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN296 ITS 1 | (none) | ------------------------------ |
| Diaporthe sp. PMM2081 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. CSN306 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. PMM2080 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. CSN297 ITS 1 | (none) | ------------------------------ |
| Diaporthe sp. CSN348 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. PMM2079 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. PMM2083 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. PMM2161 ITS5 | (none) | ------------TTGCTGGAACGCGCCCCT |
| Diaporthe sp. CSN867 ITS 1 | (none) | ------------------------------ |
| Diaporthe sp. PMM2076 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. CSN307 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. CSN343 ITS1 | (none) | ------------------------------ |
| Diaporthe sp. CSN549 ITSds | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe baccae CBS_136972 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe ravennica MFLUCC_15_0479 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe cytosporella AR5148 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe chamaeropis CBS_454.81 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe cinerascens CBS_719.96 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCC |
| Diaporthe oncostoma CBS_589.78 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe nebulae PMM1681 | (none) | ------------------------------ |
| Diaporthe inconspicua CBS_133813 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe stictica CBS_370.54 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe sp. ITS5 CS29 CSN227 HT2 | (none) | ------------------------------ |
| Diaporthe dorycnii MFLUCC_17_1015 | (none) | ------------------------------ |
| Diaporthe aspalathi CBS_117169 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe perniciosa CBS_124030 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe lithocarpus CGMCC_3.15175 | (none) | ----AGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe perjuncta CBS_109745 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe ampelina CBS_111888 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe multigutullata ZJUD98 | (none) | ---------------CTGGAACGCGCCCCA |
| Diaporthe eres AR5193 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe vaccinii CBS_160.32 | (none) | ----AGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe citrichinensis ZJUD34 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe virgiliae CWM_40755 | (none) | ------------------------------ |
| Diaporthe toxica CBS_534.93 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCA |
| Diaporthe viniferae JZB320079 | (none) | --------------GCTGG--AGCG-CCCA |
| Diaporthe sennae CFCC_51636 | (none) | ------------------------------ |
| Diaporthe amygdali CBS_126679 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCTC- |
| Diaporthe sclerotioides CBS_296.67 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe longispora CBS_194.36 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe tulliensis BRIP_62248a | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe hubeiensis JZB320123 | (none) | --------------------ACGCGCTTC- |
| Diaporthe tectonae MFLUCC_12_0777 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe ambigua CBS_114015 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCTC- |
| Diaporthe sp. PMM2078 ITS1 | (none) | ------------------------------ |
| Diaporthe sojae CBS_659.78 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe novem CBS_127271 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe leucospermi CBS111980 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe ueckerae FAU656 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe manihotia CBS_505.76 | (none) | GCGGAGGGATCATTGCTGGAACGCGCTTC- |
| Diaporthe goulteri BRIP_55657a | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCT |
| Diaporthe helianthi CBS_592.81 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCCC |
| Diaporthe rudis CBS_113201 | (none) | GCGGAGGGATCATTGTTGGAACGCGCTTCG |
| Diaporthe mayteni CBS_133185 | (none) | GCGGAGGGATCATTGCTGGAACGCGCCCC- |
| Diaporthella corylina CBS_121124 | (none) | GCGGAGGGATCATTGCTGGAAAGCGCCGTA |
Columns
None of the columns has a description.
