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Matrix 63704 of Study 28641
Citation title: "Genera of phytopathogenic fungi: GOPHY 5".
Study name: "Genera of phytopathogenic fungi: GOPHY 5".
This study is part of submission 28641
(Status: Published).
Matrices
Title: Phytophthora ITS
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Phytophthora aleatoria | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora alpina | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora cactorum | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora hedraiandra | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora idaei | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora pseudotsugae | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora Xserendipita | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora clandestina | (none) | CCACACCT---AAA-AAAAT-TCCACGTGA |
| Phytophthora iranica | (none) | CCACACCT---AAA-ATATT-TCCACGTGA |
| Phytophthora tentaculata | (none) | CCACACCT---AAA-AAATT-TCCACGTGA |
| Phytophthora andina | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora betacei | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora infestans | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora ipomoeae | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora mirabilis | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora phaseoli | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora urerae | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora nicotianae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora Xpelgrandis | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora botryosa | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora citrophthora | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora colocasiae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora himalsilva | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora insulinativitatica | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora meadii | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora mekongensis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora multibullata | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora occultans | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora terminalis | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora Xvanyenensis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora amaranthi | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora aysenensis | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora capsici | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora glovera | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora mengei | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora mexicana | (none) | CCACACCT---AAAAAACTT-TCCACGTGA |
| Phytophthora siskiyouensis | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora tropicalis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora theobromicola | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora acerina | (none) | CCACACCT--AAAA-AACTT-TTCACGTGA |
| Phytophthora capensis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora citricola | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora emzansi | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora multivora | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora pachypleura | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora pini | (none) | CCACACCT--AAAAAAACTT-TTCACGTGA |
| Phytophthora plurivora | (none) | CCACACCT--AAAA-AACTT-TTCACGTGA |
| Phytophthora acacia | (none) | CCACACCTAAAAAA-AACTT-TCCACGTGA |
| Phytophthora acaciivora | (none) | CCACACCT--AAAAAAACTTTTCCACGTGA |
| Phytophthora bisheria | (none) | CCACACCTAAAAAA-AACTT-TCCACGTGA |
| Phytophthora elongata | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora frigida | (none) | CCACACCTAAAAAA-CACTTTTCCACGTGA |
| Phytophthora oleae | (none) | ????????--???????CTT-TCCACGTGA |
| Phytophthora multivesiculata | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora ilicis | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora nemorosa | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora pluvialis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora pseudosyringae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora psychrophila | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora transitoria CZ118 | (none) | CCACACCT--AAAA-AACAT-TCCACGTGA |
| Phytophthora transitoria CZ119 | (none) | CCACACCT--AAAA-AACAT-TCCACGTGA |
| Phytophthora transitoria CZ120 | (none) | CCACACCT--AAAA-AACAT-TCCACGTGA |
| Phytophthora transitoria CZ121 | (none) | CCACACCT--AAAA-AACAT-TCCACGTGA |
| Phytophthora transitoria CZ001 | (none) | CCACACCT--AAAA-AACAT-TCCACGTGA |
| Phytophthora alticola | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora arenaria | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora boodjera | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora cathayensis | (none) | ????????--???????CTT-TCCACGTGA |
| Phytophthora megakarya | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora palmivora | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora panamensis PA019 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora panamensis PA040 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora panamensis PA108 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora panamensis PA329 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora panamensis PA328 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora quercetorum | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora agathidicida | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora castaneae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora cocois | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora heveae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora aquae cooljarloo | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora balyanboodja | (none) | CCACACCT--AAAA-CACTT-TCCACGTGA |
| Phytophthora chesapeakensis | (none) | CCACACCT-AAAAA-CACTT-TCCACGTGA |
| Phytophthora condilina | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora cooljarloo | (none) | CCACACCTAAAAAA-AACTT-TCCACGTGA |
| Phytophthora gemini | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora humicola | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora inundata | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora kwongonina | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora oreophila | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora pseudorosacearum | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora rosacearum | (none) | CCACACCTAAAAAA-AACTT-TCCACGTGA |
| Phytophthora personensis | (none) | CCACACCT--AAAA-CACTT-TCCACGTGA |
| Phytophthora amnicola | (none) | CCACACCTA-AAAA-AACTT-TCCACGTGA |
| Phytophthora bilorbang | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora borealis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora chlamydospora | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora crassamura | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora fluvialis | (none) | CCACACCTAAAAAA-AACTT-TCCACGTGA |
| Phytophthora gibbosa | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora gonapodyides | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora gregata | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora lacustris | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora litoralis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora megasperma | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora mississippiae | (none) | CCACACCT-AAAAA-AACTT-TCCACGTGA |
| Phytophthora moyootj | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora ornamentata | (none) | CCACACCTAAAAAA-AACTT-TCCACGTGA |
| Phytophthora pinifolia | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora riparia | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora thermophila | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora asparagi | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora abietivora | (none) | CCACACAT--AAAAAAACTT-TCCACGTGA |
| Phytophthora attenuata | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora europaea | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora flexuosa | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora formosa | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora fragariae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora intricata | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora rubi | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora tyrrhenica | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora uliginosa | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora uniformis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora vulcanica | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora Xalni | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora Xcambivora | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora Xheterohybrida | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora Xincrassata | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora Xmultiformis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora asiatica | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora cajani | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora melonis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora niederhauserii | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora pisi | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora pistaciae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora sojae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora variabilis TJ1495 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora variabilis TJ1496 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora variabilis TJ1497 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora variabilis TJ1498 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora variabilis TJ915 | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora vignae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora cinnamomi | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora mediterranea | (none) | CCACACCT--AAAA-ATCTT-TCCACGTGA |
| Phytophthora parvispora | (none) | CCACACCT--AAAA-ATCTT-TCCACGTGA |
| Phytophthora fragariaefolia | (none) | CCACACCT--AAAA-AACTG-TCCACGTGA |
| Phytophthora nagaii | (none) | CCACACCT--AAAA-AACTG-TCCACGTGA |
| Phytophthora cryptogea | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora drechsleri | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora erythroseptica | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora medicaginis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora pseudocryptogea | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora richardiae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora sansomeana | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora trifolii | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora brassicae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora cichorii | (none) | CCACACCT--AAAA-AACT--TCCACGTGA |
| Phytophthora dauci | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora porri | (none) | CCACACCT---AAA-AACTT-TCCCCGTGA |
| Phytophthora lactucae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora primulae | (none) | CCACACCT---AAA-AACTT-CCCCCGTGA |
| Phytophthora pseudolactucae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora foliorum | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora hibernalis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora lateralis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora ramorum | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora austrocedrae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora obscura | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora syringae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora stricta | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora aquimorbida | (none) | CCACACCT--AAAA-ACTT--TCCACGTGA |
| Phytophthora chrysanthemi | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora estuarina | (none) | ?????CCT----AA-AACTT-TCCACGTGA |
| Phytophthora hydrogena | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora hydropathica | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora irrigata | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora macilentosa | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora parsiana | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora rhizophorae | (none) | CCACACCT----AA-AACTT-TCCACGTGA |
| Phytophthora virginiana | (none) | CCACACCT---AAA-AACTT-TCCACGTGA |
| Phytophthora macrochlamydospora G1 | (none) | CCACACCT----AA-AACTTTTCCACGTGA |
| Phytophthora macrochlamydospora G2 | (none) | CCACACCT----AA-AACTTTTCCACGTGA |
| Phytophthora quininea | (none) | CCACACCT----AA-AACTT-TCCACGTGA |
| Phytophthora insolita | (none) | CCACACCT---AAA-AACTG-TCCACGTGA |
| Phytophthora polonica | (none) | CCACACCT---AAA-AACTG-TCCACGTGA |
| Phytophthora prodigiosa | (none) | CCACACCT---AAA-AACTG-TCCACGTGA |
| Phytophthora pseudopolonica | (none) | CCACACCT---AAA-AACTG-TCCACGTGA |
| Phytophthora cacuminis | (none) | CCACACCTTAAAAA----TT-TCCACGTGA |
| Phytophthora captiosa | (none) | CCACACCT--TAAA-AAAT--TCCACGTGA |
| Phytophthora constricta | (none) | CCACACCT-TAAAA-AACCA-TCCACGTGA |
| Phytophthora fallax | (none) | CCACACCT---AAA-AAAAT-TCCACGTGA |
| Phytophthora afrocarpa | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora boehmeriae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora gallica | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora gondwanensis | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora intercalaris | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora kernoviae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora morindae | (none) | CCACACCT--AAAA-AACTT-TCCACGTGA |
| Phytophthora lilii | (none) | CCACACCT--AAAA-AACTT-TTCACGTGA |
| Phytophthora castanetorum | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora quercina | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora tubulina | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Phytophthora versiformis | (none) | CCACACCT--AAAAAAACTT-TCCACGTGA |
| Nothophytophthora valdiviana | (none) | CCACACCT--AAAACAA----TCCACGTGA |
Columns
None of the columns has a description.
