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Citation
Taxa
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Analyses
Matrix 4364 of Study 9971
Citation title: "Barcoding Bamboozled by Bacteria: Convergence to Metazoan Mitochondrial Primer Targets by Marine Microbes".
This study was previously identified under the legacy study ID S2307
(Status: Published).
Matrices
Title: bamboozled barcode only
Description: Legacy TreeBASE Matrix ID = M4381
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Alteromonas macleodii Deep ecotype 196154825 | (none) | --------ATGAGCAAAGCAACTGAAGTTA |
| Bacillus anthracis str Ames Ancestor 50196905 | (none) | --------ATGGGTGCTGTCATATGG---- |
| Cellvibrio japonicus Ueda107 190684944 | (none) | --------ATGAGCACCGAGCGCAGCAGTG |
| Cnemidocarpa verrucosa 51965720 | (none) | ------------------------------ |
| Colwellia psychrerythraea 34H 71277742 | (none) | --------ATGACCACAGACGTTATAGAAC |
| Danio rerio 15079186 | (none) | --------GTGACAATCACA---------- |
| Engraulis japonica 194295284 | (none) | ------------------------------ |
| Eurythenes gryllus 58397558 | (none) | ------------------------------ |
| Eurythenes gryllus 58397562 | (none) | ------------------------------ |
| Frederica tuberosa CE2765 | (none) | ------------------------------ |
| Frederica tuberosa CE3295 | (none) | ------------------------------ |
| Hahella chejuensis KCTC 2396 83630956 | (none) | --------ATGAGTGCGGTACTA------- |
| Hydra oligactis 158668149 | (none) | ------------------------------ |
| Legionella pneumophila str Paris 53749768 | (none) | --------ATGAAATACGCAATAGCGCATT |
| Lingula anatina 13359288 | (none) | ------------------------------ |
| Lingula anatina 55583304 | (none) | --------ATGAAAACATGATCTCAT---- |
| Lottia digitalis 83282731 | (none) | ------------------------------ |
| Lumbricus terrestris 5835191 | (none) | --------ATG------------------- |
| Marinobacter aquaeolei VT8 120322793 | (none) | --------ATGAGTGCGGTTGCAGAT---- |
| Munnopsis sp 158526890 | (none) | ------------------------------ |
| Mytilus edulis 51235099 | (none) | --------ATGATAAAAATACTAAAAAAAG |
| Oceanobacter sp RED65 94427387 | (none) | --------ATGTCA---------------- |
| Oryza sativa Japonica 194033210 | (none) | --------ATGACAAATCTGGTC------- |
| Parhyale hawaiiensis 50059238 | (none) | ------------------------------ |
| Patelloida striata 68299466 | (none) | ------------------------------ |
| Penitella penita SW004 a | (none) | ------------------------------ |
| Photobacterium profundum SS9 54307237 | (none) | --------ATGACGGATATGTTACGAGAAG |
| Pseudoalteromonas atlantica T6c 109896332 | (none) | --------ATGAGCACAGTAACCGACACGA |
| Pseudoalteromonas haloplanktis TAC125 77358982 | (none) | --------ATGAGTAGCATAGTAGAACAAC |
| Pseudomonas putida W619169757190 | (none) | --------ATGAGTGCAGTGATCGACGACC |
| Psychromonas ingrahamii 37 119943794 | (none) | --------ATGACAGGTGCAGCCGATAACA |
| Reclinomonas americana 2258325 | (none) | --------ATGGCAAATTCTTTCGTAAAA- |
| Ruthia magnifica str Cm 118602060 | (none) | --------ATGACAACAGCAATAGCAACAG |
| Saccharophagus degradans 89949249 | (none) | --------ATGGCA---------------- |
| Scapharca broughtonii 89993811 | (none) | ------------------------------ |
| Scapharca broughtonii 89993965 | (none) | ------------------------------ |
| Scopelocheirus schellenbergi 58397568 | (none) | ------------------------------ |
| Scypholanceola sp 4 158324657 | (none) | ------------------------------ |
| Shewanella amazonensis SB2B 119773142 | (none) | --------ATGACAACCACGACCCACGATA |
| Shewanella baltica OS185 152998555 | (none) | --------ATGAGCACAACGACTCAAGATC |
| Shewanella denitrificans OS217 91791369 | (none) | --------ATGAGCACTATGACGCAAGATA |
| Shewanella frigidimarina NCIMB 400 114561188 | (none) | --------ATGAGCACAACAACGCACGATA |
| Shewanella pealeana ATCC 700345 157844830 | (none) | --------ATGAGCACGATTACACAAGATT |
| Vesicomyosocius okutanii HA 148244169 | (none) | --------ATGACAACAATAACTGCTTACA |
| Vibrio parahaemolyticus RIMD 28899855 | (none) | --------ATGAGTAAGCCAGCAGACAAAG |
| Vibrio shilonii AK1 149187128 | (none) | --------ATGAAAACGGATCCTATGGAAA |
| Vibrio vulnificus YJ016 37675660 | (none) | --------ATGAGTCAATTTGAAAAACCGG |
| Xestospongia muta 158938970 | (none) | --------ATGAGTTTATATTTAAGT---- |
| Xylotra setacea SW002 | (none) | ------------------------------ |
Columns
None of the columns has a description.
