@ARTICLE{TreeBASE2Ref20926,
author = {Clive M. Brasier and Selma Franceschini and Anna Maria Vettraino and Everett Hansen and Sarah Green and Joan F. Webber and Andrea Vannini},
title = {Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis },
year = {2012},
keywords = {Growth rate, Colony pattern, Multivariate analysis, Multigene phylogeny, Evolution },
doi = {10.1016/j.funbio.2012.10.002},
url = {http://},
pmid = {},
journal = {Fungal Biology},
volume = {116},
number = {12},
pages = {1232?1249},
abstract = {Until recently Phytophthora lateralis was known only as the cause of dieback and mortality
of Chamaecyparis lawsoniana in its native range in the Pacific Northwest (PNW). Since the
1990s however disease outbreaks have occurred increasingly on ornamental C. lawsoniana
in Europe; and in 2007 the pathogen was discovered in soil around old growth Chamaecyparis
obtusa in Taiwan, where it may be endemic. When the phenotypes of over 150 isolates of
P. lateralis from Taiwan, across the PNW (British Columbia to California) and from France,
the Netherlands and the UK were compared three growth rate groups were resolved: one
slow growing from Taiwan, one fast growing from the PNW and Europe, and one of intermediate
growth from a small area of the UK. Within these growth groups distinct subtypes
were identified based on colony patterns and spore metrics and further discriminated in
a multivariate analysis. The assumption that the three main growth groups represented
phylogenetic units was tested by comparative sequencing of two mitochondrial and three
nuclear genes. This assumption was confirmed. In addition two phenotype clusters within
the Taiwan growth group were also shown to be phylogenetically distinct. These four phenotypically
and genotypically unique populations are informally designated as the PNW
lineage, the UK lineage, the Taiwan J lineage, and the Taiwan K lineage. Their characteristics
and distribution are described and their evolution, taxonomic, and plant health significance
is discussed.}
}
Citation for Study 12950
Citation title:
"Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis ".
Study name:
"Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis ".
This study is part of submission 12950
(Status: Published).
Citation
Brasier C., Franceschini S., Vettraino A., Hansen E., Green S., Webber J.F., & Vannini A. 2012. Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis. Fungal Biology, 116(12): 1232?1249.
Authors
-
Brasier C.
-
Franceschini S.
+393937122352
-
Vettraino A.
(submitter)
+393204363557
-
Hansen E.
-
Green S.
-
Webber J.F.
-
Vannini A.
Abstract
Until recently Phytophthora lateralis was known only as the cause of dieback and mortality
of Chamaecyparis lawsoniana in its native range in the Pacific Northwest (PNW). Since the
1990s however disease outbreaks have occurred increasingly on ornamental C. lawsoniana
in Europe; and in 2007 the pathogen was discovered in soil around old growth Chamaecyparis
obtusa in Taiwan, where it may be endemic. When the phenotypes of over 150 isolates of
P. lateralis from Taiwan, across the PNW (British Columbia to California) and from France,
the Netherlands and the UK were compared three growth rate groups were resolved: one
slow growing from Taiwan, one fast growing from the PNW and Europe, and one of intermediate
growth from a small area of the UK. Within these growth groups distinct subtypes
were identified based on colony patterns and spore metrics and further discriminated in
a multivariate analysis. The assumption that the three main growth groups represented
phylogenetic units was tested by comparative sequencing of two mitochondrial and three
nuclear genes. This assumption was confirmed. In addition two phenotype clusters within
the Taiwan growth group were also shown to be phylogenetically distinct. These four phenotypically
and genotypically unique populations are informally designated as the PNW
lineage, the UK lineage, the Taiwan J lineage, and the Taiwan K lineage. Their characteristics
and distribution are described and their evolution, taxonomic, and plant health significance
is discussed.
Keywords
Growth rate, Colony pattern, Multivariate analysis, Multigene phylogeny, Evolution
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S12950
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref20926,
author = {Clive M. Brasier and Selma Franceschini and Anna Maria Vettraino and Everett Hansen and Sarah Green and Joan F. Webber and Andrea Vannini},
title = {Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis },
year = {2012},
keywords = {Growth rate, Colony pattern, Multivariate analysis, Multigene phylogeny, Evolution },
doi = {10.1016/j.funbio.2012.10.002},
url = {http://},
pmid = {},
journal = {Fungal Biology},
volume = {116},
number = {12},
pages = {1232?1249},
abstract = {Until recently Phytophthora lateralis was known only as the cause of dieback and mortality
of Chamaecyparis lawsoniana in its native range in the Pacific Northwest (PNW). Since the
1990s however disease outbreaks have occurred increasingly on ornamental C. lawsoniana
in Europe; and in 2007 the pathogen was discovered in soil around old growth Chamaecyparis
obtusa in Taiwan, where it may be endemic. When the phenotypes of over 150 isolates of
P. lateralis from Taiwan, across the PNW (British Columbia to California) and from France,
the Netherlands and the UK were compared three growth rate groups were resolved: one
slow growing from Taiwan, one fast growing from the PNW and Europe, and one of intermediate
growth from a small area of the UK. Within these growth groups distinct subtypes
were identified based on colony patterns and spore metrics and further discriminated in
a multivariate analysis. The assumption that the three main growth groups represented
phylogenetic units was tested by comparative sequencing of two mitochondrial and three
nuclear genes. This assumption was confirmed. In addition two phenotype clusters within
the Taiwan growth group were also shown to be phylogenetically distinct. These four phenotypically
and genotypically unique populations are informally designated as the PNW
lineage, the UK lineage, the Taiwan J lineage, and the Taiwan K lineage. Their characteristics
and distribution are described and their evolution, taxonomic, and plant health significance
is discussed.}
}
- Show RIS reference
TY - JOUR
ID - 20926
AU - Brasier,Clive M.
AU - Franceschini,Selma
AU - Vettraino,Anna Maria
AU - Hansen,Everett
AU - Green,Sarah
AU - Webber,Joan F.
AU - Vannini,Andrea
T1 - Four phenotypically and phylogenetically distinct lineages in Phytophthora lateralis
PY - 2012
KW - Growth rate
KW - Colony pattern
KW - Multivariate analysis
KW - Multigene phylogeny
KW - Evolution
UR - http://dx.doi.org/10.1016/j.funbio.2012.10.002
N2 - Until recently Phytophthora lateralis was known only as the cause of dieback and mortality
of Chamaecyparis lawsoniana in its native range in the Pacific Northwest (PNW). Since the
1990s however disease outbreaks have occurred increasingly on ornamental C. lawsoniana
in Europe; and in 2007 the pathogen was discovered in soil around old growth Chamaecyparis
obtusa in Taiwan, where it may be endemic. When the phenotypes of over 150 isolates of
P. lateralis from Taiwan, across the PNW (British Columbia to California) and from France,
the Netherlands and the UK were compared three growth rate groups were resolved: one
slow growing from Taiwan, one fast growing from the PNW and Europe, and one of intermediate
growth from a small area of the UK. Within these growth groups distinct subtypes
were identified based on colony patterns and spore metrics and further discriminated in
a multivariate analysis. The assumption that the three main growth groups represented
phylogenetic units was tested by comparative sequencing of two mitochondrial and three
nuclear genes. This assumption was confirmed. In addition two phenotype clusters within
the Taiwan growth group were also shown to be phylogenetically distinct. These four phenotypically
and genotypically unique populations are informally designated as the PNW
lineage, the UK lineage, the Taiwan J lineage, and the Taiwan K lineage. Their characteristics
and distribution are described and their evolution, taxonomic, and plant health significance
is discussed.
L3 - 10.1016/j.funbio.2012.10.002
JF - Fungal Biology
VL - 116
IS - 12
ER -