@ARTICLE{TreeBASE2Ref24805,
author = {Belinda Kahnt and Michael Gerth and Robert John Paxton and Christoph Bleidorn and Martin Husemann},
title = {The complete mitochondrial genome of the endemic and highly specialised South African bee species: Rediviva intermixta (Hymenoptera: Melittidae), with a comparison to other bee mitogenomes},
year = {2015},
keywords = {Mitochondrion, mitogenome, phylogeny, bees, Apis, Bombus, NGS},
doi = {},
url = {http://},
pmid = {},
journal = {Biological Journal of the Linnean Society},
volume = {},
number = {},
pages = {},
abstract = {We describe the complete mitochondrial genome (mitogenome) of the South African bee Rediviva intermixta, the first mitogenomic data for a species belonging to the basally branching bee family (Melittidae), and compare it to other published bee (Anthophila) mitogenomes. The mitogenome of R. intermixta is 16,875 bp long, shows the highest GC content (20.1%) of all studied bee mitogenomes, and contains the typical set of 37 genes. The order of protein-coding and rRNA genes is highly conserved across Anthophila, but several tRNA rearrangements have occurred. These were mostly observed in the first and sixth (nad3-nad5 junction) tRNA clusters, which are considered rearrangement hotspots in other taxa. All protein-coding genes contained the common start and stop codons, with cox2 and nad1 having two consecutive stop codons. The mean genetic distance between R. intermixta and the other Anthophila ranged from 29% to 33%. Phylogenetic analysis of the whole mitogenome supported R. intermixta and Colletidae as sister group to all other apid species. The discordance among gene sequences in phylogenetic signal detected allows selection of mitochondrial genes with greater information content for future phylogenetic analyses.}
}
Citation for Study 17896
Citation title:
"The complete mitochondrial genome of the endemic and highly specialised South African bee species: Rediviva intermixta (Hymenoptera: Melittidae), with a comparison to other bee mitogenomes".
Study name:
"The complete mitochondrial genome of the endemic and highly specialised South African bee species: Rediviva intermixta (Hymenoptera: Melittidae), with a comparison to other bee mitogenomes".
This study is part of submission 17896
(Status: Published).
Citation
Kahnt B., Gerth M., Paxton R.J., Bleidorn C., & Husemann M. 2015. The complete mitochondrial genome of the endemic and highly specialised South African bee species: Rediviva intermixta (Hymenoptera: Melittidae), with a comparison to other bee mitogenomes. Biological Journal of the Linnean Society, .
Authors
-
Kahnt B.
(submitter)
-
Gerth M.
-
Paxton R.J.
-
Bleidorn C.
-
Husemann M.
Abstract
We describe the complete mitochondrial genome (mitogenome) of the South African bee Rediviva intermixta, the first mitogenomic data for a species belonging to the basally branching bee family (Melittidae), and compare it to other published bee (Anthophila) mitogenomes. The mitogenome of R. intermixta is 16,875 bp long, shows the highest GC content (20.1%) of all studied bee mitogenomes, and contains the typical set of 37 genes. The order of protein-coding and rRNA genes is highly conserved across Anthophila, but several tRNA rearrangements have occurred. These were mostly observed in the first and sixth (nad3-nad5 junction) tRNA clusters, which are considered rearrangement hotspots in other taxa. All protein-coding genes contained the common start and stop codons, with cox2 and nad1 having two consecutive stop codons. The mean genetic distance between R. intermixta and the other Anthophila ranged from 29% to 33%. Phylogenetic analysis of the whole mitogenome supported R. intermixta and Colletidae as sister group to all other apid species. The discordance among gene sequences in phylogenetic signal detected allows selection of mitochondrial genes with greater information content for future phylogenetic analyses.
Keywords
Mitochondrion, mitogenome, phylogeny, bees, Apis, Bombus, NGS
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S17896
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref24805,
author = {Belinda Kahnt and Michael Gerth and Robert John Paxton and Christoph Bleidorn and Martin Husemann},
title = {The complete mitochondrial genome of the endemic and highly specialised South African bee species: Rediviva intermixta (Hymenoptera: Melittidae), with a comparison to other bee mitogenomes},
year = {2015},
keywords = {Mitochondrion, mitogenome, phylogeny, bees, Apis, Bombus, NGS},
doi = {},
url = {http://},
pmid = {},
journal = {Biological Journal of the Linnean Society},
volume = {},
number = {},
pages = {},
abstract = {We describe the complete mitochondrial genome (mitogenome) of the South African bee Rediviva intermixta, the first mitogenomic data for a species belonging to the basally branching bee family (Melittidae), and compare it to other published bee (Anthophila) mitogenomes. The mitogenome of R. intermixta is 16,875 bp long, shows the highest GC content (20.1%) of all studied bee mitogenomes, and contains the typical set of 37 genes. The order of protein-coding and rRNA genes is highly conserved across Anthophila, but several tRNA rearrangements have occurred. These were mostly observed in the first and sixth (nad3-nad5 junction) tRNA clusters, which are considered rearrangement hotspots in other taxa. All protein-coding genes contained the common start and stop codons, with cox2 and nad1 having two consecutive stop codons. The mean genetic distance between R. intermixta and the other Anthophila ranged from 29% to 33%. Phylogenetic analysis of the whole mitogenome supported R. intermixta and Colletidae as sister group to all other apid species. The discordance among gene sequences in phylogenetic signal detected allows selection of mitochondrial genes with greater information content for future phylogenetic analyses.}
}
- Show RIS reference
TY - JOUR
ID - 24805
AU - Kahnt,Belinda
AU - Gerth,Michael
AU - Paxton,Robert John
AU - Bleidorn,Christoph
AU - Husemann,Martin
T1 - The complete mitochondrial genome of the endemic and highly specialised South African bee species: Rediviva intermixta (Hymenoptera: Melittidae), with a comparison to other bee mitogenomes
PY - 2015
KW - Mitochondrion
KW - mitogenome
KW - phylogeny
KW - bees
KW - Apis
KW - Bombus
KW - NGS
UR - http://dx.doi.org/
N2 - We describe the complete mitochondrial genome (mitogenome) of the South African bee Rediviva intermixta, the first mitogenomic data for a species belonging to the basally branching bee family (Melittidae), and compare it to other published bee (Anthophila) mitogenomes. The mitogenome of R. intermixta is 16,875 bp long, shows the highest GC content (20.1%) of all studied bee mitogenomes, and contains the typical set of 37 genes. The order of protein-coding and rRNA genes is highly conserved across Anthophila, but several tRNA rearrangements have occurred. These were mostly observed in the first and sixth (nad3-nad5 junction) tRNA clusters, which are considered rearrangement hotspots in other taxa. All protein-coding genes contained the common start and stop codons, with cox2 and nad1 having two consecutive stop codons. The mean genetic distance between R. intermixta and the other Anthophila ranged from 29% to 33%. Phylogenetic analysis of the whole mitogenome supported R. intermixta and Colletidae as sister group to all other apid species. The discordance among gene sequences in phylogenetic signal detected allows selection of mitochondrial genes with greater information content for future phylogenetic analyses.
L3 -
JF - Biological Journal of the Linnean Society
VL -
IS -
ER -
Go to search
Citation
Taxa
Matrices
Trees
Analyses
