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Citation for Study 16163

Citation title: "The genus Bipolaris ".

Study name: "The genus Bipolaris ".

This study is part of submission 16163 (Status: Published).

Citation

Manamgoda D.S., Rossman A.Y., Castlebury L.A., Madrid H., Crous P.W., & Hyde K.D. 2014. The genus Bipolaris. Studies in Mycology, .

Authors

• Manamgoda D.S. (submitter)
• Rossman A.Y.
• Castlebury L.A. 3015045270
• Madrid H.
• Crous P.W.
• Hyde K.D.

Abstract

The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on DNA sequence data derived from living cultures of fresh isolates, available ex-type cultures from worldwide collections and observation of type and additional specimens. Combined analyses of ITS, GPDH and TEF gene sequences were used to reconstruct the molecular phylogeny of the genus Bipolaris for species with living cultures. The GPDH gene is considered to be the best single marker for species of Bipolaris. Generic boundaries between Bipolaris and Curvularia are revised and presented in an updated combined ITS and GPDH phylogenetic tree. We accept 46 species in the genus Bipolaris and clarify the taxonomy, host associations, geographic distributions and species synonymies. Modern descriptions and illustrations are provided for 37 species in the genus and notes are provided when recent descriptions are available for the other taxa. Bipolaris chloridis, B. cynodontis, B. salviniae, B. victoriae and B. yamadae are epi- or neotypified and lectotypes are designated for B. hadrotrichoides and B. stenospila. Excluded and doubtful species are listed with notes on taxonomy and phylogeny. A taxonomic key is provided for the morphological identification of species within the genus.

Keywords

Brown spot of rice, field crop diseases, graminicolous fungi, helminthosporoid genera, molecular phylogeny, Pleosporales, Southern corn leaf blight, taxonomy

External links

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S16163
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref23485,
  	 author = {Dimuthu Sandarenu Manamgoda and Amy Y Rossman and Lisa A Castlebury and Hugo   Madrid and Pedro W. Crous and Kevin D Hyde},
  	 title = {The genus Bipolaris },
  	 year = {2014},
  	 keywords = {Brown spot of rice, field crop diseases, graminicolous fungi, helminthosporoid genera, molecular phylogeny, Pleosporales, Southern corn leaf blight, taxonomy},
  	 doi = {},
  	 url = {http://},
  	 pmid = {},
  	 journal = {Studies in Mycology},
  	 volume = {},
  	 number = {},
  	 pages = {},
  	 abstract = {The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on DNA sequence data derived from living cultures of fresh isolates, available ex-type cultures from worldwide collections and observation of type and additional specimens. Combined analyses of ITS, GPDH and TEF gene sequences were used to reconstruct the molecular phylogeny of the genus Bipolaris for species with living cultures. The GPDH gene is considered to be the best single marker for species of Bipolaris. Generic boundaries between Bipolaris and Curvularia are revised and presented in an updated combined ITS and GPDH phylogenetic tree. We accept 46 species in the genus Bipolaris and clarify the taxonomy, host associations, geographic distributions and species synonymies. Modern descriptions and illustrations are provided for 37 species in the genus and notes are provided when recent descriptions are available for the other taxa. Bipolaris chloridis, B. cynodontis, B. salviniae, B. victoriae and B. yamadae are epi- or neotypified and lectotypes are designated for B. hadrotrichoides and B. stenospila. Excluded and doubtful species are listed with notes on taxonomy and phylogeny. A taxonomic key is provided for the morphological identification of species within the genus. }
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 23485
  AU  - Manamgoda,Dimuthu Sandarenu
  AU  - Rossman,Amy Y
  AU  - Castlebury,Lisa A
  AU  - Madrid,Hugo  
  AU  - Crous,Pedro W.
  AU  - Hyde,Kevin D
  T1  - The genus Bipolaris 
  PY  - 2014
  KW  - Brown spot of rice
  KW  - field crop diseases
  KW  - graminicolous fungi
  KW  - helminthosporoid genera
  KW  - molecular phylogeny
  KW  - Pleosporales
  KW  - Southern corn leaf blight
  KW  - taxonomy
  UR  - http://dx.doi.org/
  N2  - The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on DNA sequence data derived from living cultures of fresh isolates, available ex-type cultures from worldwide collections and observation of type and additional specimens. Combined analyses of ITS, GPDH and TEF gene sequences were used to reconstruct the molecular phylogeny of the genus Bipolaris for species with living cultures. The GPDH gene is considered to be the best single marker for species of Bipolaris. Generic boundaries between Bipolaris and Curvularia are revised and presented in an updated combined ITS and GPDH phylogenetic tree. We accept 46 species in the genus Bipolaris and clarify the taxonomy, host associations, geographic distributions and species synonymies. Modern descriptions and illustrations are provided for 37 species in the genus and notes are provided when recent descriptions are available for the other taxa. Bipolaris chloridis, B. cynodontis, B. salviniae, B. victoriae and B. yamadae are epi- or neotypified and lectotypes are designated for B. hadrotrichoides and B. stenospila. Excluded and doubtful species are listed with notes on taxonomy and phylogeny. A taxonomic key is provided for the morphological identification of species within the genus. 
  L3  - 
  JF  - Studies in Mycology
  VL  - 
  IS  - 
  ER  -