TreeBASE Search-Citation for study 603

Delicious

Connotea

Citation for Study 603

Citation title: "Phylogenetic relationships and tempo of early diversification in Anolis lizards.".

This study was previously identified under the legacy study ID S432 (Status: Published).

Citation

Jackman T., Larson A., De queiroz K., & Losos J. 1999. Phylogenetic relationships and tempo of early diversification in Anolis lizards. Systematic Biology, 48(2): 254-285.

Authors

Jackman T.
Larson A.
De queiroz K.
Losos J.

Abstract

We examine phylogenetic relationships among anoles using mitochondrial DNA sequences from the NADH dehydrogenase subunit 2 gene (ND2) and five transfer-RNA genes representing 1,455 alignable base positions and 866 phylogenetically informative characters (parsimony criterion). We also present 16 morphological characters for phylogenetic analysis. Our analyses yielded poorly-supported nodes deep in the anole tree but many well-supported nodes for more recent phylogenetic divergences. We test the hypothesis that the major clades of anoles form a hard polytomy and present a general statistical framework for testing hypothesis of simultaneous branching of lineages by using molecular sequence data. Our results suggest that rapid diversification early in the evolutionary history of anoles explains why numberous researchers have had difficulty reconstruction well-supported dichotomous phylogenetic trees for anoles. Anolis; mitochondrial DNA; parametric bootstrap; permutation test; phjylogeny; polytomy.

Keywords

Anolis; mitochondrial DNA; parametric bootstrap; permutation test; phylogeny; polytomy

External links

DOI: 10.1080/106351599260283

About this resource

Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S603
Other versions: Nexus NeXML

Show BibTeX reference

		@ARTICLE{TreeBASE2Ref15968,
	 author = {Todd R.  Jackman and Allan  Larson and Kevin  de Queiroz and Jonathan B.  Losos},
	 title = {Phylogenetic relationships and tempo of early diversification in Anolis lizards.},
	 year = {1999},
	 keywords = {Anolis; mitochondrial DNA; parametric bootstrap; permutation test; phylogeny; polytomy},
	 doi = {10.1080/106351599260283},
	 url = {},
	 pmid = {},
	 journal = {Systematic Biology},
	 volume = {48},
	 number = {2},
	 pages = {254--285},
	 abstract = {We examine phylogenetic relationships among anoles using mitochondrial DNA sequences from the NADH dehydrogenase subunit 2 gene (ND2) and five transfer-RNA genes representing 1,455 alignable base positions and 866 phylogenetically informative characters (parsimony criterion). We also present 16 morphological characters for phylogenetic analysis. Our analyses yielded poorly-supported nodes deep in the anole tree but many well-supported nodes for more recent phylogenetic divergences. We test the hypothesis that the major clades of anoles form a hard polytomy and present a general statistical framework for testing hypothesis of simultaneous branching of lineages by using molecular sequence data. Our results suggest that rapid diversification early in the evolutionary history of anoles explains why numberous researchers have had difficulty reconstruction well-supported dichotomous phylogenetic trees for anoles. Anolis; mitochondrial DNA; parametric bootstrap; permutation test; phjylogeny; polytomy.}
}

Show RIS reference

		TY  - JOUR
ID  - 15968
AU  - Jackman,Todd R. 
AU  - Larson,Allan 
AU  - de Queiroz,Kevin 
AU  - Losos,Jonathan B. 
T1  - Phylogenetic relationships and tempo of early diversification in Anolis lizards.
PY  - 1999
KW  - Anolis; mitochondrial DNA; parametric bootstrap; permutation test; phylogeny; polytomy
UR  - http://dx.doi.org/10.1080/106351599260283
N2  - We examine phylogenetic relationships among anoles using mitochondrial DNA sequences from the NADH dehydrogenase subunit 2 gene (ND2) and five transfer-RNA genes representing 1,455 alignable base positions and 866 phylogenetically informative characters (parsimony criterion). We also present 16 morphological characters for phylogenetic analysis. Our analyses yielded poorly-supported nodes deep in the anole tree but many well-supported nodes for more recent phylogenetic divergences. We test the hypothesis that the major clades of anoles form a hard polytomy and present a general statistical framework for testing hypothesis of simultaneous branching of lineages by using molecular sequence data. Our results suggest that rapid diversification early in the evolutionary history of anoles explains why numberous researchers have had difficulty reconstruction well-supported dichotomous phylogenetic trees for anoles. Anolis; mitochondrial DNA; parametric bootstrap; permutation test; phjylogeny; polytomy.
L3  - 10.1080/106351599260283
JF  - Systematic Biology
VL  - 48
IS  - 2
SP  - 254
EP  - 285
ER  -