@ARTICLE{TreeBASE2Ref15206,
author = {Jerrold I. Davis and Gitte Petersen and Ole Seberg and Dennis W. Stevenson and Christopher R. Hardy and Mark P. Simmons and Fabian A. Michelangeli and Douglas H. Goldman and Lisa M. Campbell and Chelsea D. Specht and James I. Cohen},
title = {Are mitochondrial genes useful for the analysis of monocot relationships?},
year = {2006},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Taxon},
volume = {},
number = {},
pages = {},
abstract = {A phylogenetic analysis of monocots and related dicots was conducted, using a four-gene matrix consisting of two genes from the plastid genome (matK and rbcL) and two from the mitochondrial genome (atpA/atp1 and cob). The taxon sample includes 101 monocots and 36 dicots, and all four genes were sampled for all 137 taxa. Jackknife support was assessed for clades resolved by the four-gene analysis, and compared to support for the same clades by each of the four three-gene subset matrices, in order to quantify the degree to which each gene contributed to or detracted from support for each clade. Instances of positively and negatively correlated support for clades by genes of the same and different genomes were observed. In particular, the placement of Acorus within a clade that also includes Tofieldiaceae, Araceae, and Alismatales s.s., as opposed to its frequent placement as sister of all other monocots, is supported by atpA and matK. The results indicate that genes from the mitochondrial genome provide a unique test of relationships that have been inferred with plastid-encoded genes.}
}
Citation for Study 1674
Citation title:
"Are mitochondrial genes useful for the analysis of monocot relationships?".
This study was previously identified under the legacy study ID S1631
(Status: Published).
Citation
Davis J., Petersen G., Seberg O., Stevenson D., Hardy C., Simmons M., Michelangeli F., Goldman D., Campbell L., Specht C., & Cohen J. 2006. Are mitochondrial genes useful for the analysis of monocot relationships?. Taxon, null.
Authors
-
Davis J.
-
Petersen G.
4535322194
-
Seberg O.
+45 3532 2195
-
Stevenson D.
-
Hardy C.
-
Simmons M.
-
Michelangeli F.
-
Goldman D.
-
Campbell L.
-
Specht C.
-
Cohen J.
Abstract
A phylogenetic analysis of monocots and related dicots was conducted, using a four-gene matrix consisting of two genes from the plastid genome (matK and rbcL) and two from the mitochondrial genome (atpA/atp1 and cob). The taxon sample includes 101 monocots and 36 dicots, and all four genes were sampled for all 137 taxa. Jackknife support was assessed for clades resolved by the four-gene analysis, and compared to support for the same clades by each of the four three-gene subset matrices, in order to quantify the degree to which each gene contributed to or detracted from support for each clade. Instances of positively and negatively correlated support for clades by genes of the same and different genomes were observed. In particular, the placement of Acorus within a clade that also includes Tofieldiaceae, Araceae, and Alismatales s.s., as opposed to its frequent placement as sister of all other monocots, is supported by atpA and matK. The results indicate that genes from the mitochondrial genome provide a unique test of relationships that have been inferred with plastid-encoded genes.
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S1674
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref15206,
author = {Jerrold I. Davis and Gitte Petersen and Ole Seberg and Dennis W. Stevenson and Christopher R. Hardy and Mark P. Simmons and Fabian A. Michelangeli and Douglas H. Goldman and Lisa M. Campbell and Chelsea D. Specht and James I. Cohen},
title = {Are mitochondrial genes useful for the analysis of monocot relationships?},
year = {2006},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Taxon},
volume = {},
number = {},
pages = {},
abstract = {A phylogenetic analysis of monocots and related dicots was conducted, using a four-gene matrix consisting of two genes from the plastid genome (matK and rbcL) and two from the mitochondrial genome (atpA/atp1 and cob). The taxon sample includes 101 monocots and 36 dicots, and all four genes were sampled for all 137 taxa. Jackknife support was assessed for clades resolved by the four-gene analysis, and compared to support for the same clades by each of the four three-gene subset matrices, in order to quantify the degree to which each gene contributed to or detracted from support for each clade. Instances of positively and negatively correlated support for clades by genes of the same and different genomes were observed. In particular, the placement of Acorus within a clade that also includes Tofieldiaceae, Araceae, and Alismatales s.s., as opposed to its frequent placement as sister of all other monocots, is supported by atpA and matK. The results indicate that genes from the mitochondrial genome provide a unique test of relationships that have been inferred with plastid-encoded genes.}
}
- Show RIS reference
TY - JOUR
ID - 15206
AU - Davis,Jerrold I.
AU - Petersen,Gitte
AU - Seberg,Ole
AU - Stevenson,Dennis W.
AU - Hardy,Christopher R.
AU - Simmons,Mark P.
AU - Michelangeli,Fabian A.
AU - Goldman,Douglas H.
AU - Campbell,Lisa M.
AU - Specht,Chelsea D.
AU - Cohen,James I.
T1 - Are mitochondrial genes useful for the analysis of monocot relationships?
PY - 2006
KW -
UR -
N2 - A phylogenetic analysis of monocots and related dicots was conducted, using a four-gene matrix consisting of two genes from the plastid genome (matK and rbcL) and two from the mitochondrial genome (atpA/atp1 and cob). The taxon sample includes 101 monocots and 36 dicots, and all four genes were sampled for all 137 taxa. Jackknife support was assessed for clades resolved by the four-gene analysis, and compared to support for the same clades by each of the four three-gene subset matrices, in order to quantify the degree to which each gene contributed to or detracted from support for each clade. Instances of positively and negatively correlated support for clades by genes of the same and different genomes were observed. In particular, the placement of Acorus within a clade that also includes Tofieldiaceae, Araceae, and Alismatales s.s., as opposed to its frequent placement as sister of all other monocots, is supported by atpA and matK. The results indicate that genes from the mitochondrial genome provide a unique test of relationships that have been inferred with plastid-encoded genes.
L3 -
JF - Taxon
VL -
IS -
ER -
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