@ARTICLE{TreeBASE2Ref19310,
author = {Brad R Ruhfel and Volker Bittrich and Claudia Patean Bove and Mats H. G. Gustafsson and C. Thomas Philbrick and Rolf Rutishauser and Zhenxiang Xi and Charles C. Davis},
title = {Phylogeny of the Clusioid Clade (Malpighiales): Evidence From the Plastid and Mitochondrial Genomes.},
year = {2011},
keywords = {Garcinia mangostana; Guttiferae; Hypericum perforatum; mangosteen; matK; matR; morphology; ndhF; rbcL; St. John?s wort},
doi = {10.3732/ajb.1000354},
url = {http://},
pmid = {21613119},
journal = {American Journal of Botany},
volume = {98},
number = {2},
pages = {306--325},
abstract = {Premise of the study: The clusioid clade includes five families (i.e., Bonnetiaceae, Calophyllaceae, Clusiaceae sensu stricto [s.s.], Hypericaceae, and Podostemaceae) represented by 91 genera and ~1,900 species. Species in this clade form a conspicuous element of tropical forests worldwide and are important in horticulture, timber production, and pharmacology. To clarify phylogenetic uncertainty in the group, we conducted a multilocus phylogenetic analysis of the clusioids with greatly improved taxon sampling compared to previous studies.
? Methods: We conducted phylogenetic analyses of plastid (matK, ndhF, and rbcL) and mitochondrial (matR) nucleotide sequence data using parsimony, maximum likelihood, and Bayesian inference. Our combined data set included ~200 species representing all major clusioid subclades identified in previous studies, plus numerous species spanning the taxonomic, morphological, and biogeographic breadth of the clusioid clade.
? Key results: Our analyses indicate that the genera Tovomita (Clusiaceae s.s.); Harungana and Hypericum (Hypericaceae); and Ledermanniella s.s. and Zeylanidium (Podostemaceae) are not monophyletic. In addition, we place four genera that have not been included in any molecular study: Ceratolacis, Diamantina, and Griffithella (Podostemaceae), and Santomasia (Hypericaceae). Finally, our results indicate that Lianthus, Santomasia, Thornea, and Triadenum can be safely merged into Hypericum (Hypericaceae).
? Conclusions: We present the first well-resolved, taxon-rich phylogeny of the clusioid clade. Taxon sampling and resolution within the clade are greatly improved compared to previous studies and provide a strong basis for improving the classification of the group. In addition, our phylogeny will form the foundation of future work investigating the biogeography of tropical angiosperms with Gondwanan distributions.
}
}
Citation for Study 10995
Citation title:
"Phylogeny of the Clusioid Clade (Malpighiales): Evidence From the Plastid and Mitochondrial Genomes.".
Study name:
"Phylogeny of the Clusioid Clade (Malpighiales): Evidence From the Plastid and Mitochondrial Genomes.".
This study is part of submission 10985
(Status: Published).
Citation
Ruhfel B.R., Bittrich V., Bove C., Gustafsson M., Philbrick C., Rutishauser R., Xi Z., & Davis C. 2011. Phylogeny of the Clusioid Clade (Malpighiales): Evidence From the Plastid and Mitochondrial Genomes. American Journal of Botany, 98(2): 306-325.
Authors
-
Ruhfel B.R.
(submitter)
734-846-1353
-
Bittrich V.
-
Bove C.
-
Gustafsson M.
-
Philbrick C.
-
Rutishauser R.
-
Xi Z.
-
Davis C.
Abstract
Premise of the study: The clusioid clade includes five families (i.e., Bonnetiaceae, Calophyllaceae, Clusiaceae sensu stricto [s.s.], Hypericaceae, and Podostemaceae) represented by 91 genera and ~1,900 species. Species in this clade form a conspicuous element of tropical forests worldwide and are important in horticulture, timber production, and pharmacology. To clarify phylogenetic uncertainty in the group, we conducted a multilocus phylogenetic analysis of the clusioids with greatly improved taxon sampling compared to previous studies.
? Methods: We conducted phylogenetic analyses of plastid (matK, ndhF, and rbcL) and mitochondrial (matR) nucleotide sequence data using parsimony, maximum likelihood, and Bayesian inference. Our combined data set included ~200 species representing all major clusioid subclades identified in previous studies, plus numerous species spanning the taxonomic, morphological, and biogeographic breadth of the clusioid clade.
? Key results: Our analyses indicate that the genera Tovomita (Clusiaceae s.s.); Harungana and Hypericum (Hypericaceae); and Ledermanniella s.s. and Zeylanidium (Podostemaceae) are not monophyletic. In addition, we place four genera that have not been included in any molecular study: Ceratolacis, Diamantina, and Griffithella (Podostemaceae), and Santomasia (Hypericaceae). Finally, our results indicate that Lianthus, Santomasia, Thornea, and Triadenum can be safely merged into Hypericum (Hypericaceae).
? Conclusions: We present the first well-resolved, taxon-rich phylogeny of the clusioid clade. Taxon sampling and resolution within the clade are greatly improved compared to previous studies and provide a strong basis for improving the classification of the group. In addition, our phylogeny will form the foundation of future work investigating the biogeography of tropical angiosperms with Gondwanan distributions.
Keywords
Garcinia mangostana; Guttiferae; Hypericum perforatum; mangosteen; matK; matR; morphology; ndhF; rbcL; St. John?s wort
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S10995
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref19310,
author = {Brad R Ruhfel and Volker Bittrich and Claudia Patean Bove and Mats H. G. Gustafsson and C. Thomas Philbrick and Rolf Rutishauser and Zhenxiang Xi and Charles C. Davis},
title = {Phylogeny of the Clusioid Clade (Malpighiales): Evidence From the Plastid and Mitochondrial Genomes.},
year = {2011},
keywords = {Garcinia mangostana; Guttiferae; Hypericum perforatum; mangosteen; matK; matR; morphology; ndhF; rbcL; St. John?s wort},
doi = {10.3732/ajb.1000354},
url = {http://},
pmid = {21613119},
journal = {American Journal of Botany},
volume = {98},
number = {2},
pages = {306--325},
abstract = {Premise of the study: The clusioid clade includes five families (i.e., Bonnetiaceae, Calophyllaceae, Clusiaceae sensu stricto [s.s.], Hypericaceae, and Podostemaceae) represented by 91 genera and ~1,900 species. Species in this clade form a conspicuous element of tropical forests worldwide and are important in horticulture, timber production, and pharmacology. To clarify phylogenetic uncertainty in the group, we conducted a multilocus phylogenetic analysis of the clusioids with greatly improved taxon sampling compared to previous studies.
? Methods: We conducted phylogenetic analyses of plastid (matK, ndhF, and rbcL) and mitochondrial (matR) nucleotide sequence data using parsimony, maximum likelihood, and Bayesian inference. Our combined data set included ~200 species representing all major clusioid subclades identified in previous studies, plus numerous species spanning the taxonomic, morphological, and biogeographic breadth of the clusioid clade.
? Key results: Our analyses indicate that the genera Tovomita (Clusiaceae s.s.); Harungana and Hypericum (Hypericaceae); and Ledermanniella s.s. and Zeylanidium (Podostemaceae) are not monophyletic. In addition, we place four genera that have not been included in any molecular study: Ceratolacis, Diamantina, and Griffithella (Podostemaceae), and Santomasia (Hypericaceae). Finally, our results indicate that Lianthus, Santomasia, Thornea, and Triadenum can be safely merged into Hypericum (Hypericaceae).
? Conclusions: We present the first well-resolved, taxon-rich phylogeny of the clusioid clade. Taxon sampling and resolution within the clade are greatly improved compared to previous studies and provide a strong basis for improving the classification of the group. In addition, our phylogeny will form the foundation of future work investigating the biogeography of tropical angiosperms with Gondwanan distributions.
}
}
- Show RIS reference
TY - JOUR
ID - 19310
AU - Ruhfel,Brad R
AU - Bittrich,Volker
AU - Bove,Claudia Patean
AU - Gustafsson,Mats H. G.
AU - Philbrick,C. Thomas
AU - Rutishauser,Rolf
AU - Xi,Zhenxiang
AU - Davis,Charles C.
T1 - Phylogeny of the Clusioid Clade (Malpighiales): Evidence From the Plastid and Mitochondrial Genomes.
PY - 2011
KW - Garcinia mangostana; Guttiferae; Hypericum perforatum; mangosteen; matK; matR; morphology; ndhF; rbcL; St. John?s wort
UR - http://dx.doi.org/10.3732/ajb.1000354
N2 - Premise of the study: The clusioid clade includes five families (i.e., Bonnetiaceae, Calophyllaceae, Clusiaceae sensu stricto [s.s.], Hypericaceae, and Podostemaceae) represented by 91 genera and ~1,900 species. Species in this clade form a conspicuous element of tropical forests worldwide and are important in horticulture, timber production, and pharmacology. To clarify phylogenetic uncertainty in the group, we conducted a multilocus phylogenetic analysis of the clusioids with greatly improved taxon sampling compared to previous studies.
? Methods: We conducted phylogenetic analyses of plastid (matK, ndhF, and rbcL) and mitochondrial (matR) nucleotide sequence data using parsimony, maximum likelihood, and Bayesian inference. Our combined data set included ~200 species representing all major clusioid subclades identified in previous studies, plus numerous species spanning the taxonomic, morphological, and biogeographic breadth of the clusioid clade.
? Key results: Our analyses indicate that the genera Tovomita (Clusiaceae s.s.); Harungana and Hypericum (Hypericaceae); and Ledermanniella s.s. and Zeylanidium (Podostemaceae) are not monophyletic. In addition, we place four genera that have not been included in any molecular study: Ceratolacis, Diamantina, and Griffithella (Podostemaceae), and Santomasia (Hypericaceae). Finally, our results indicate that Lianthus, Santomasia, Thornea, and Triadenum can be safely merged into Hypericum (Hypericaceae).
? Conclusions: We present the first well-resolved, taxon-rich phylogeny of the clusioid clade. Taxon sampling and resolution within the clade are greatly improved compared to previous studies and provide a strong basis for improving the classification of the group. In addition, our phylogeny will form the foundation of future work investigating the biogeography of tropical angiosperms with Gondwanan distributions.
L3 - 10.3732/ajb.1000354
JF - American Journal of Botany
VL - 98
IS - 2
SP - 306
EP - 325
ER -