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Citation for Study 10511

Citation title: "The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences".

Study name: "The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences".

This study is part of submission 10501 (Status: Published).

Citation

Ota Y. 2010. The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences. Mycoscience, .

Authors

• Ota Y.

Abstract

An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of rDNA. The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese Armillaria spp. The sequences of this species and ?A. novae-zelandiae? from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand.

Keywords

Armillaria novae-zelandiae ? Elongation factor-1α? phylogenetic analysis, ITS

External links

• Other URL: http://www.springer.com/life+sciences/microbiology/journal/10267

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S10511
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref18955,
  	 author = {Yuko   Ota},
  	 title = {The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences},
  	 year = {2010},
  	 keywords = {Armillaria novae-zelandiae ? Elongation factor-1α? phylogenetic analysis, ITS},
  	 doi = {},
  	 url = {http://www.springer.com/life+sciences/microbiology/journal/10267},
  	 pmid = {},
  	 journal = {Mycoscience},
  	 volume = {},
  	 number = {},
  	 pages = {},
  	 abstract = {An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of rDNA. The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese Armillaria spp. The sequences of this species and ?A. novae-zelandiae? from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand.}
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 18955
  AU  - Ota,Yuko  
  T1  - The phylogenetic position of an Armillaria species from Amami-Oshima, a subtropical island of Japan, based on elongation factor and ITS sequences
  PY  - 2010
  KW  - Armillaria novae-zelandiae ? Elongation factor-1α? phylogenetic analysis
  KW  - ITS
  UR  - http://www.springer.com/life+sciences/microbiology/journal/10267
  N2  - An undetermined Armillaria species was collected on Amami-Oshima, a subtropical island of Japan. The phylogenetic position of the Armillaria sp. was determined using sequences of the elongation factor-1α (EF-1α) gene and the internal transcribed spacer (ITS) region (ITS1-5.8S-ITS2) of rDNA. The phylogenetic analyses based on EF-1α and ITS sequences showed that this species differs from known Japanese Armillaria spp. The sequences of this species and ?A. novae-zelandiae? from Southeast Asia were contained in a strongly supported clade, which was adjacent to a well-supported sister clade containing A. novae-zelandiae from Australia and New Zealand.
  L3  - 
  JF  - Mycoscience
  VL  - 
  IS  - 
  ER  -