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Citation for Study 1779

Citation title: "Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate.".

This study was previously identified under the legacy study ID S1751 (Status: Published).

Citation

R?ber L., Kottelat M., Tan H., Ng P., & Britz R. 2007. Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate. BMC Evolutionary Biology, 7(38): 1-10.

Authors

• R?ber L.
• Kottelat M.
• Tan H.
• Ng P.
• Britz R.

Abstract

Background: Paedocypris, a highly developmentally truncated fish from peat swamp forests in Southeast Asia, comprises the worlds smallest vertebrate. Although clearly a cyprinid fish, a hypothesis about its phylogenetic position among the subfamilies of this largest teleost family with over 2400 species does not exist. Here we present a phylogenetic analyses of 227 cypriniform taxa, including 213 cyprinids, based upon complete mitochondrial DNA cytochrome b nucleotide sequences to determine the phylogenetic position of Paedocypris and to study the evolution of miniaturization among cyprinids. Results: Our analyses reveal a strongly supported sister group relationship (clade C) between Paedocypris and another developmentally truncated miniature cyprinid Sundadanio. Clade C was resolved as sister group of a larger clade comprised of small rasborine taxa (clade D). We found that miniaturised taxa are more numerous in the rasborine clade A, comprising clade C and D, than in any other cyprinid clade. The consensus cytb in cyprinids comprises 380 amino acids and an incomplete T-- stop codon. We noted that a few cyprinids mostly rasborine taxa placed within clade A had either a TAA or TAG stop codon, 376, 378, or 381 amino acids, and up to 10 base pairs (bp) of noncoding region before the 5 end of the tRNA-Thr. Relaxed molecular clock estimates revealed high divergence times for the studied Sundadanio and Paedocypris populations and provide a first temporal framework for cyprinid evolution. Conclusions: Paedocypris belongs to a clade that shows recurrent miniaturization (including both taxa characterized by developmental truncation and proportioned dwarfism) and that its closest relative is another miniaturized taxon, the genus Sundadanio. We conclude that the miniaturized cyprinids with remarkable morphological novelties like Paedocypris and Danionella are at the same time the most developmentaly truncated taxa. The miniaturized cyprinids with no or few developmental truncations like Boraras, Microrasbora, and Horadandia show no such evolutionary novelties.

External links

• DOI: 10.1186/1471-2148-7-38

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S1779
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref17286,
  	 author = {L.  R?ber and Maurice  Kottelat and Heok Hui  Tan and Peter K. L.  Ng and Ralf  Britz},
  	 title = {Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate.},
  	 year = {2007},
  	 keywords = {},
  	 doi = {10.1186/1471-2148-7-38},
  	 url = {},
  	 pmid = {},
  	 journal = {BMC Evolutionary Biology},
  	 volume = {7},
  	 number = {38},
  	 pages = {1--10},
  	 abstract = {Background: Paedocypris, a highly developmentally truncated fish from peat swamp forests in Southeast Asia, comprises the worlds smallest vertebrate. Although clearly a cyprinid fish, a hypothesis about its phylogenetic position among the subfamilies of this largest teleost family with over 2400 species does not exist. Here we present a phylogenetic analyses of 227 cypriniform taxa, including 213 cyprinids, based upon complete mitochondrial DNA cytochrome b nucleotide sequences to determine the phylogenetic position of Paedocypris and to study the evolution of miniaturization among cyprinids. Results: Our analyses reveal a strongly supported sister group relationship (clade C) between Paedocypris and another developmentally truncated miniature cyprinid Sundadanio. Clade C was resolved as sister group of a larger clade comprised of small rasborine taxa (clade D). We found that miniaturised taxa are more numerous in the rasborine clade A, comprising clade C and D, than in any other cyprinid clade. The consensus cytb in cyprinids comprises 380 amino acids and an incomplete T-- stop codon. We noted that a few cyprinids mostly rasborine taxa placed within clade A had either a TAA or TAG stop codon, 376, 378, or 381 amino acids, and up to 10 base pairs (bp) of noncoding region before the 5 end of the tRNA-Thr. Relaxed molecular clock estimates revealed high divergence times for the studied Sundadanio and Paedocypris populations and provide a first temporal framework for cyprinid evolution. Conclusions: Paedocypris belongs to a clade that shows recurrent miniaturization (including both taxa characterized by developmental truncation and proportioned dwarfism) and that its closest relative is another miniaturized taxon, the genus Sundadanio. We conclude that the miniaturized cyprinids with remarkable morphological novelties like Paedocypris and Danionella are at the same time the most developmentaly truncated taxa. The miniaturized cyprinids with no or few developmental truncations like Boraras, Microrasbora, and Horadandia show no such evolutionary novelties.}
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 17286
  AU  - R?ber,L. 
  AU  - Kottelat,Maurice 
  AU  - Tan,Heok Hui 
  AU  - Ng,Peter K. L. 
  AU  - Britz,Ralf 
  T1  - Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate.
  PY  - 2007
  KW  - 
  UR  - 
  N2  - Background: Paedocypris, a highly developmentally truncated fish from peat swamp forests in Southeast Asia, comprises the worlds smallest vertebrate. Although clearly a cyprinid fish, a hypothesis about its phylogenetic position among the subfamilies of this largest teleost family with over 2400 species does not exist. Here we present a phylogenetic analyses of 227 cypriniform taxa, including 213 cyprinids, based upon complete mitochondrial DNA cytochrome b nucleotide sequences to determine the phylogenetic position of Paedocypris and to study the evolution of miniaturization among cyprinids. Results: Our analyses reveal a strongly supported sister group relationship (clade C) between Paedocypris and another developmentally truncated miniature cyprinid Sundadanio. Clade C was resolved as sister group of a larger clade comprised of small rasborine taxa (clade D). We found that miniaturised taxa are more numerous in the rasborine clade A, comprising clade C and D, than in any other cyprinid clade. The consensus cytb in cyprinids comprises 380 amino acids and an incomplete T-- stop codon. We noted that a few cyprinids mostly rasborine taxa placed within clade A had either a TAA or TAG stop codon, 376, 378, or 381 amino acids, and up to 10 base pairs (bp) of noncoding region before the 5 end of the tRNA-Thr. Relaxed molecular clock estimates revealed high divergence times for the studied Sundadanio and Paedocypris populations and provide a first temporal framework for cyprinid evolution. Conclusions: Paedocypris belongs to a clade that shows recurrent miniaturization (including both taxa characterized by developmental truncation and proportioned dwarfism) and that its closest relative is another miniaturized taxon, the genus Sundadanio. We conclude that the miniaturized cyprinids with remarkable morphological novelties like Paedocypris and Danionella are at the same time the most developmentaly truncated taxa. The miniaturized cyprinids with no or few developmental truncations like Boraras, Microrasbora, and Horadandia show no such evolutionary novelties.
  L3  - 10.1186/1471-2148-7-38
  JF  - BMC Evolutionary Biology
  VL  - 7
  IS  - 38
  SP  - 1
  EP  - 10
  ER  -