@ARTICLE{TreeBASE2Ref23468,
author = {William Quaedvlieg and Manfred Binder and Johannes (Ewald) Zacharias Groenewald and Bret A. Summerell and Angus Carnegie and Treena I. Burgess and Pedro W. Crous},
title = {Introducing the Consolidated Species Concept to resolve },
year = {2014},
keywords = {Eucalyptus, multi-locus, phylogeny, species concepts, taxonomy},
doi = {10.3767/003158514X681981},
url = {http://www.persoonia.org/Issue/33/01.pdf},
pmid = {},
journal = {Persoonia},
volume = {33},
number = {},
pages = {1--40},
abstract = {Abstract The Teratosphaeriaceae represents a recently established family that includes numerous saprobic,
extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and
RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also pro-
vide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that
occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub,
Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease
of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are
distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species con-
cepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show
that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except
species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has
the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus.}
}
Citation for Study 16145
Citation title:
"Introducing the Consolidated Species Concept to resolve ".
Study name:
"Introducing the Consolidated Species Concept to resolve ".
This study is part of submission 16145
(Status: Published).
Citation
Quaedvlieg W., Binder M., Groenewald J.Z., Summerell B., Carnegie A., Burgess T., & Crous P.W. 2014. Introducing the Consolidated Species Concept to resolve. Persoonia, 33: 1-40.
Authors
-
Quaedvlieg W.
(submitter)
0628052286
-
Binder M.
508 793-7625
-
Groenewald J.Z.
+31302122600
-
Summerell B.
-
Carnegie A.
-
Burgess T.
-
Crous P.W.
Abstract
Abstract The Teratosphaeriaceae represents a recently established family that includes numerous saprobic,
extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and
RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also pro-
vide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that
occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub,
Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease
of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are
distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species con-
cepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show
that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except
species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has
the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus.
Keywords
Eucalyptus, multi-locus, phylogeny, species concepts, taxonomy
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S16145
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref23468,
author = {William Quaedvlieg and Manfred Binder and Johannes (Ewald) Zacharias Groenewald and Bret A. Summerell and Angus Carnegie and Treena I. Burgess and Pedro W. Crous},
title = {Introducing the Consolidated Species Concept to resolve },
year = {2014},
keywords = {Eucalyptus, multi-locus, phylogeny, species concepts, taxonomy},
doi = {10.3767/003158514X681981},
url = {http://www.persoonia.org/Issue/33/01.pdf},
pmid = {},
journal = {Persoonia},
volume = {33},
number = {},
pages = {1--40},
abstract = {Abstract The Teratosphaeriaceae represents a recently established family that includes numerous saprobic,
extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and
RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also pro-
vide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that
occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub,
Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease
of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are
distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species con-
cepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show
that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except
species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has
the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus.}
}
- Show RIS reference
TY - JOUR
ID - 23468
AU - Quaedvlieg,William
AU - Binder,Manfred
AU - Groenewald, Johannes (Ewald) Zacharias
AU - Summerell,Bret A.
AU - Carnegie,Angus
AU - Burgess,Treena I.
AU - Crous,Pedro W.
T1 - Introducing the Consolidated Species Concept to resolve
PY - 2014
KW - Eucalyptus
KW - multi-locus
KW - phylogeny
KW - species concepts
KW - taxonomy
UR - http://www.persoonia.org/Issue/33/01.pdf
N2 - Abstract The Teratosphaeriaceae represents a recently established family that includes numerous saprobic,
extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and
RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also pro-
vide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that
occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub,
Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease
of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are
distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species con-
cepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show
that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except
species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has
the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus.
L3 - 10.3767/003158514X681981
JF - Persoonia
VL - 33
IS -
SP - 1
EP - 40
ER -