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Citation for Study 23717

Citation title: "Novel collophorina-like genera and species from Prunus trees and vineyards in Germany".

Study name: "Novel collophorina-like genera and species from Prunus trees and vineyards in Germany".

This study is part of submission 23717 (Status: Published).

Citation

Bien S., Kraus C., & Damm U. 2020. Novel collophorina-like genera and species from Prunus trees and vineyards in Germany. Persoonia, 45: 46-67.

Authors

• Bien S.
• Kraus C.
• Damm U. +49 3581 4760 5312

Abstract

Strains with a yeast-like appearance were frequently collected in two surveys on the biodiversity of fungi in Germany, either associated with necroses in wood of Prunus trees in orchards in Saxony, Lower Saxony and Baden-W?rttemberg or captured in spore traps mounted on grapevine shoots in a vineyard in Rhineland-Palatinate. The morphology of the strains was reminiscent of the genus Collophorina: all strains produced aseptate conidia on integrated conidiogenous cells directly on hyphae, on discrete phialides, adelophialides and by microcyclic conidiation, while in some strains additionally endoconidia or conidia in conidiomata were observed. Blastn searches with the ITS region placed the strains in the Leotiomycetes close to Collophorina spp. Analyses based on morphological and multi-locus sequence data (LSU, ITS, EF-1α, GAPDH) revealed that the 152 isolates from wood of Prunus spp. belong to five species including C. paarla, C. africana and three new species. A further ten isolates from spore traps belonged to seven new species, of which one was isolated from Prunus wood as well. However, a comparison with both LSU and ITS sequence data of these collophorina-like species with reference sequences from further Leotiomycetes revealed the genus Collophorina to be polyphyletic and the strains to pertain to several genera within the Phacidiales. Collophorina paarla and C. euphorbiae are transferred to the newly erected genera Pallidophorina and Ramoconidiophora, respectively. The new genera Capturomyces, Variabilispora and Vexillomyces are erected to accommodate five new species isolated from spore traps. In total nine species were recognised as new to science and described as Collophorina badensis, C. germanica, C. neorubra, Capturomyces funiculosus, Ca. luteus, Tympanis inflata, Variabilispora flava, Vexillomyces palatinus and V. verruculosus.

Keywords

Collophora, morphology, multi-locus phylogeny, new taxa, species diversity, systematics

External links

• DOI: 10.3767/persoonia.2020.45.02

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S23717
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref29118,
  	 author = {Steffen  Bien and Christian  Kraus and Ulrike  Damm},
  	 title = {Novel collophorina-like genera and species from Prunus trees and vineyards in Germany},
  	 year = {2020},
  	 keywords = {Collophora, morphology, multi-locus phylogeny, new taxa, species diversity, systematics},
  	 doi = {10.3767/persoonia.2020.45.02},
  	 url = {http://},
  	 pmid = {},
  	 journal = {Persoonia},
  	 volume = {45},
  	 number = {},
  	 pages = {46--67},
  	 abstract = {Strains with a yeast-like appearance were frequently collected in two surveys on the biodiversity of fungi
  in Germany, either associated with necroses in wood of Prunus trees in orchards in Saxony, Lower Saxony and
  Baden-W?rttemberg or captured in spore traps mounted on grapevine shoots in a vineyard in Rhineland-Palatinate.
  The morphology of the strains was reminiscent of the genus Collophorina: all strains produced aseptate conidia on
  integrated conidiogenous cells directly on hyphae, on discrete phialides, adelophialides and by microcyclic conidiation,
  while in some strains additionally endoconidia or conidia in conidiomata were observed. Blastn searches with
  the ITS region placed the strains in the Leotiomycetes close to Collophorina spp. Analyses based on morphological
  and multi-locus sequence data (LSU, ITS, EF-1α, GAPDH) revealed that the 152 isolates from wood of Prunus spp.
  belong to five species including C. paarla, C. africana and three new species. A further ten isolates from spore traps
  belonged to seven new species, of which one was isolated from Prunus wood as well. However, a comparison with
  both LSU and ITS sequence data of these collophorina-like species with reference sequences from further Leotiomycetes
  revealed the genus Collophorina to be polyphyletic and the strains to pertain to several genera within the
  Phacidiales. Collophorina paarla and C. euphorbiae are transferred to the newly erected genera Pallidophorina and
  Ramoconidiophora, respectively. The new genera Capturomyces, Variabilispora and Vexillomyces are erected to
  accommodate five new species isolated from spore traps. In total nine species were recognised as new to science
  and described as Collophorina badensis, C. germanica, C. neorubra, Capturomyces funiculosus, Ca. luteus, Tympanis
  inflata, Variabilispora flava, Vexillomyces palatinus and V. verruculosus.}
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 29118
  AU  - Bien,Steffen 
  AU  - Kraus,Christian 
  AU  - Damm,Ulrike 
  T1  - Novel collophorina-like genera and species from Prunus trees and vineyards in Germany
  PY  - 2020
  KW  - Collophora
  KW  - morphology
  KW  - multi-locus phylogeny
  KW  - new taxa
  KW  - species diversity
  KW  - systematics
  UR  - http://dx.doi.org/10.3767/persoonia.2020.45.02
  N2  - Strains with a yeast-like appearance were frequently collected in two surveys on the biodiversity of fungi
  in Germany, either associated with necroses in wood of Prunus trees in orchards in Saxony, Lower Saxony and
  Baden-W?rttemberg or captured in spore traps mounted on grapevine shoots in a vineyard in Rhineland-Palatinate.
  The morphology of the strains was reminiscent of the genus Collophorina: all strains produced aseptate conidia on
  integrated conidiogenous cells directly on hyphae, on discrete phialides, adelophialides and by microcyclic conidiation,
  while in some strains additionally endoconidia or conidia in conidiomata were observed. Blastn searches with
  the ITS region placed the strains in the Leotiomycetes close to Collophorina spp. Analyses based on morphological
  and multi-locus sequence data (LSU, ITS, EF-1α, GAPDH) revealed that the 152 isolates from wood of Prunus spp.
  belong to five species including C. paarla, C. africana and three new species. A further ten isolates from spore traps
  belonged to seven new species, of which one was isolated from Prunus wood as well. However, a comparison with
  both LSU and ITS sequence data of these collophorina-like species with reference sequences from further Leotiomycetes
  revealed the genus Collophorina to be polyphyletic and the strains to pertain to several genera within the
  Phacidiales. Collophorina paarla and C. euphorbiae are transferred to the newly erected genera Pallidophorina and
  Ramoconidiophora, respectively. The new genera Capturomyces, Variabilispora and Vexillomyces are erected to
  accommodate five new species isolated from spore traps. In total nine species were recognised as new to science
  and described as Collophorina badensis, C. germanica, C. neorubra, Capturomyces funiculosus, Ca. luteus, Tympanis
  inflata, Variabilispora flava, Vexillomyces palatinus and V. verruculosus.
  L3  - 10.3767/persoonia.2020.45.02
  JF  - Persoonia
  VL  - 45
  IS  - 
  SP  - 46
  EP  - 67
  ER  -