@ARTICLE{TreeBASE2Ref20959,
author = {Laura J Kelly and Andrew R Leitch and James J Clarkson and Sandra Knapp and Mark W. Chase},
title = {Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes).},
year = {2013},
keywords = {Gene tree, hybridization, network, polyploid, recombination, reticulate evolution.},
doi = {10.1111/j.1558-5646.2012.01748.x},
url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1558-5646.2012.01748.x/abstract},
pmid = {23289563},
journal = {Evolution},
volume = {67},
number = {1},
pages = {80--94},
abstract = {Nicotiana (Solanaceae) provides an ideal system for understanding polyploidization, a pervasive and powerful evolutionary force in plants, as this genus contains several groups of allotetraploids that formed at different times from different diploid progenitors. However, the parental lineages of the largest group of allotetraploids, Nicotiana section Suaveolentes, have been problematic to identify. Using data from four regions of three low-copy nuclear genes, nuclear ribosomal DNA and regions of the plastid genome, we have reconstructed the evolutionary origin of sect. Suaveolentes and identified the most likely diploid progenitors by using a combination of gene trees and network approaches to uncover the most strongly supported evidence of species relationships. Our analyses best support a scenario where a member of the sect. Sylvestres lineage acted as the paternal progenitor and a member of either sect. Petunioides or sect. Noctiflorae that also contained introgressed DNA from the other, or a hypothetical hybrid species between these two sections, was the maternal progenitor. Nicotiana exemplifies many of the factors that can complicate the reconstruction of polyploidy evolutionary history and highlights how reticulate evolution at the diploid level can add even greater complexity to allopolyploid genomes.}
}
Citation for Study 12975
Citation title:
"Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes).".
Study name:
"Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes).".
This study is part of submission 12975
(Status: Published).
Citation
Kelly L.J., Leitch A.R., Clarkson J.J., Knapp S., & Chase M. 2013. Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes). Evolution, 67(1): 80-94.
Authors
-
Kelly L.J.
(submitter)
-
Leitch A.R.
-
Clarkson J.J.
-
Knapp S.
-
Chase M.
Abstract
Nicotiana (Solanaceae) provides an ideal system for understanding polyploidization, a pervasive and powerful evolutionary force in plants, as this genus contains several groups of allotetraploids that formed at different times from different diploid progenitors. However, the parental lineages of the largest group of allotetraploids, Nicotiana section Suaveolentes, have been problematic to identify. Using data from four regions of three low-copy nuclear genes, nuclear ribosomal DNA and regions of the plastid genome, we have reconstructed the evolutionary origin of sect. Suaveolentes and identified the most likely diploid progenitors by using a combination of gene trees and network approaches to uncover the most strongly supported evidence of species relationships. Our analyses best support a scenario where a member of the sect. Sylvestres lineage acted as the paternal progenitor and a member of either sect. Petunioides or sect. Noctiflorae that also contained introgressed DNA from the other, or a hypothetical hybrid species between these two sections, was the maternal progenitor. Nicotiana exemplifies many of the factors that can complicate the reconstruction of polyploidy evolutionary history and highlights how reticulate evolution at the diploid level can add even greater complexity to allopolyploid genomes.
Keywords
Gene tree, hybridization, network, polyploid, recombination, reticulate evolution.
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S12975
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref20959,
author = {Laura J Kelly and Andrew R Leitch and James J Clarkson and Sandra Knapp and Mark W. Chase},
title = {Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes).},
year = {2013},
keywords = {Gene tree, hybridization, network, polyploid, recombination, reticulate evolution.},
doi = {10.1111/j.1558-5646.2012.01748.x},
url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1558-5646.2012.01748.x/abstract},
pmid = {23289563},
journal = {Evolution},
volume = {67},
number = {1},
pages = {80--94},
abstract = {Nicotiana (Solanaceae) provides an ideal system for understanding polyploidization, a pervasive and powerful evolutionary force in plants, as this genus contains several groups of allotetraploids that formed at different times from different diploid progenitors. However, the parental lineages of the largest group of allotetraploids, Nicotiana section Suaveolentes, have been problematic to identify. Using data from four regions of three low-copy nuclear genes, nuclear ribosomal DNA and regions of the plastid genome, we have reconstructed the evolutionary origin of sect. Suaveolentes and identified the most likely diploid progenitors by using a combination of gene trees and network approaches to uncover the most strongly supported evidence of species relationships. Our analyses best support a scenario where a member of the sect. Sylvestres lineage acted as the paternal progenitor and a member of either sect. Petunioides or sect. Noctiflorae that also contained introgressed DNA from the other, or a hypothetical hybrid species between these two sections, was the maternal progenitor. Nicotiana exemplifies many of the factors that can complicate the reconstruction of polyploidy evolutionary history and highlights how reticulate evolution at the diploid level can add even greater complexity to allopolyploid genomes.}
}
- Show RIS reference
TY - JOUR
ID - 20959
AU - Kelly,Laura J
AU - Leitch,Andrew R
AU - Clarkson,James J
AU - Knapp,Sandra
AU - Chase,Mark W.
T1 - Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes).
PY - 2013
KW - Gene tree
KW - hybridization
KW - network
KW - polyploid
KW - recombination
KW - reticulate evolution.
UR - http://onlinelibrary.wiley.com/doi/10.1111/j.1558-5646.2012.01748.x/abstract
N2 - Nicotiana (Solanaceae) provides an ideal system for understanding polyploidization, a pervasive and powerful evolutionary force in plants, as this genus contains several groups of allotetraploids that formed at different times from different diploid progenitors. However, the parental lineages of the largest group of allotetraploids, Nicotiana section Suaveolentes, have been problematic to identify. Using data from four regions of three low-copy nuclear genes, nuclear ribosomal DNA and regions of the plastid genome, we have reconstructed the evolutionary origin of sect. Suaveolentes and identified the most likely diploid progenitors by using a combination of gene trees and network approaches to uncover the most strongly supported evidence of species relationships. Our analyses best support a scenario where a member of the sect. Sylvestres lineage acted as the paternal progenitor and a member of either sect. Petunioides or sect. Noctiflorae that also contained introgressed DNA from the other, or a hypothetical hybrid species between these two sections, was the maternal progenitor. Nicotiana exemplifies many of the factors that can complicate the reconstruction of polyploidy evolutionary history and highlights how reticulate evolution at the diploid level can add even greater complexity to allopolyploid genomes.
L3 - 10.1111/j.1558-5646.2012.01748.x
JF - Evolution
VL - 67
IS - 1
SP - 80
EP - 94
ER -
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