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Citation for Study 11104

Citation title: "Complex patterns of speciation in cosmopolitan ?rock posy? lichens - discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota) ".

Study name: "Complex patterns of speciation in cosmopolitan ?rock posy? lichens - discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota) ".

This study is part of submission 11094 (Status: Published).

Citation

Leavitt S., Fankhauser J.D., Leavitt D., Porter L.D., Johnson L., & St. clair L.L. 2010. Complex patterns of speciation in cosmopolitan ?rock posy? lichens - discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota). Molecular Phylogenetics and Evolution, .

Authors

• Leavitt S. (submitter)
• Fankhauser J.D.
• Leavitt D.
• Porter L.D.
• Johnson L.
• St. clair L.L.

Abstract

A growing body of evidence indicates that in some cases morphology-based species circumscription of lichenized ascomycetes misrepresents the number of existing species. The cosmopolitan ?rock posy? lichen (Rhizoplaca melanophthalma) species-complex includes a number of morphologically distinct species that are both geographically and ecologically widespread, providing a model system to evaluate speciation in lichen-forming ascomycetes. In this study, we assembled multiple lines of evidence from nuclear DNA sequence data, morphology, and biochemistry for species delimitation in the Rhizoplaca melanophthalma species-complex. We define a total of ten candidate species in this study, four of which were previously recognized as distinct taxa and six previously unrecognized lineages found within what has been thus far considered a single species. Candidate species are supported using inferences from multiple empirical operational criteria. Multiple instances of sympatry support the view that these lineages merit recognition as distinct taxa. Generally, we found little corroboration between morphological and chemical characters and previously unidentified lineages defined in this study, as most candidate species were morphologically polymorphic. However, secondary metabolite data supported one cryptic saxicolous lineage, characterized by orsellinic-derived gyrophoric and lecanoric acids, which we consider to be taxonomically significant. Our study of the R. melanophthalma species-complex indicates that the genus Rhizoplaca, as presently circumscribed, is more diverse in western North American than originally perceived, and we present our analyses as a working example of species delimitation in morphologically cryptic and recently diverged lichenized fungi.

Keywords

Coalescent theory, species delimitation, lichen species concepts, Rhizoplaca, secondary metabolites, species delimitation, species tree phylogeny estimation, vagrant lichens

About this resource

• Canonical resource URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11104
• Other versions: Nexus NeXML
• Show BibTeX reference

  		@ARTICLE{TreeBASE2Ref19397,
  	 author = {Steve  Leavitt and Johnathon D Fankhauser and Dean  Leavitt and Lyndon D.  Porter and L. A.  Johnson and Larry L. St. Clair},
  	 title = {Complex patterns of speciation in cosmopolitan ?rock posy? lichens - discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota) },
  	 year = {2010},
  	 keywords = {Coalescent theory, species delimitation, lichen species concepts, Rhizoplaca, secondary metabolites, species delimitation, species tree phylogeny estimation, vagrant lichens  },
  	 doi = {},
  	 url = {},
  	 pmid = {},
  	 journal = {Molecular Phylogenetics and Evolution},
  	 volume = {},
  	 number = {},
  	 pages = {},
  	 abstract = {A growing body of evidence indicates that in some cases morphology-based species circumscription of lichenized ascomycetes misrepresents the number of existing species.  The cosmopolitan ?rock posy? lichen (Rhizoplaca melanophthalma) species-complex includes a number of morphologically distinct species that are both geographically and ecologically widespread, providing a model system to evaluate speciation in lichen-forming ascomycetes.  In this study, we assembled multiple lines of evidence from nuclear DNA sequence data, morphology, and biochemistry for species delimitation in the Rhizoplaca melanophthalma species-complex.  We define a total of ten candidate species in this study, four of which were previously recognized as distinct taxa and six previously unrecognized lineages found within what has been thus far considered a single species.  Candidate species are supported using inferences from multiple empirical operational criteria.  Multiple instances of sympatry support the view that these lineages merit recognition as distinct taxa.  Generally, we found little corroboration between morphological and chemical characters and previously unidentified lineages defined in this study, as most candidate species were morphologically polymorphic.  However, secondary metabolite data supported one cryptic saxicolous lineage, characterized by orsellinic-derived gyrophoric and lecanoric acids, which we consider to be taxonomically significant.  Our study of the R. melanophthalma species-complex indicates that the genus Rhizoplaca, as presently circumscribed, is more diverse in western North American than originally perceived, and we present our analyses as a working example of species delimitation in morphologically cryptic and recently diverged lichenized fungi.    }
  }
  		

• Show RIS reference

  		TY  - JOUR
  ID  - 19397
  AU  - Leavitt,Steve 
  AU  - Fankhauser,Johnathon D
  AU  - Leavitt,Dean 
  AU  - Porter,Lyndon D. 
  AU  - Johnson,L. A. 
  AU  - St. Clair,Larry L.
  T1  - Complex patterns of speciation in cosmopolitan ?rock posy? lichens - discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota) 
  PY  - 2010
  KW  - Coalescent theory
  KW  - species delimitation
  KW  - lichen species concepts
  KW  - Rhizoplaca
  KW  - secondary metabolites
  KW  - species delimitation
  KW  - species tree phylogeny estimation
  KW  - vagrant lichens  
  UR  - 
  N2  - A growing body of evidence indicates that in some cases morphology-based species circumscription of lichenized ascomycetes misrepresents the number of existing species.  The cosmopolitan ?rock posy? lichen (Rhizoplaca melanophthalma) species-complex includes a number of morphologically distinct species that are both geographically and ecologically widespread, providing a model system to evaluate speciation in lichen-forming ascomycetes.  In this study, we assembled multiple lines of evidence from nuclear DNA sequence data, morphology, and biochemistry for species delimitation in the Rhizoplaca melanophthalma species-complex.  We define a total of ten candidate species in this study, four of which were previously recognized as distinct taxa and six previously unrecognized lineages found within what has been thus far considered a single species.  Candidate species are supported using inferences from multiple empirical operational criteria.  Multiple instances of sympatry support the view that these lineages merit recognition as distinct taxa.  Generally, we found little corroboration between morphological and chemical characters and previously unidentified lineages defined in this study, as most candidate species were morphologically polymorphic.  However, secondary metabolite data supported one cryptic saxicolous lineage, characterized by orsellinic-derived gyrophoric and lecanoric acids, which we consider to be taxonomically significant.  Our study of the R. melanophthalma species-complex indicates that the genus Rhizoplaca, as presently circumscribed, is more diverse in western North American than originally perceived, and we present our analyses as a working example of species delimitation in morphologically cryptic and recently diverged lichenized fungi.    
  L3  - 
  JF  - Molecular Phylogenetics and Evolution
  VL  - 
  IS  - 
  ER  -